RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 CYP4F8P98187 520 aa20.95■□□□□ 0.94
ACTB-210ENST00000477812 C1QBPQ07021 282 aaKnown RBP20.95■□□□□ 0.94
ACTB-210ENST00000477812 TEAD2Q15562 447 aa20.95■□□□□ 0.94
ACTB-210ENST00000477812 SMAD2Q15796 467 aaKnown RBP20.95■□□□□ 0.94
ACTB-210ENST00000477812 SLC18A3Q16572 532 aa20.95■□□□□ 0.94
ACTB-210ENST00000477812 C2CD6Q53TS8 623 aa20.95■□□□□ 0.94
ACTB-210ENST00000477812 STXBP5Q5T5C0 1151 aa20.95■□□□□ 0.94
ACTB-210ENST00000477812 FAM183BPQ6ZVS7 135 aa20.95■□□□□ 0.94
ACTB-210ENST00000477812 MON1AQ86VX9 555 aa20.95■□□□□ 0.94
ACTB-210ENST00000477812 XYLT1Q86Y38 959 aa20.95■□□□□ 0.94
ACTB-210ENST00000477812 NPAS3Q8IXF0 933 aa20.95■□□□□ 0.94
ACTB-210ENST00000477812 C11orf70Q9BRQ4 267 aa20.95■□□□□ 0.94
ACTB-210ENST00000477812 ISCUQ9H1K1 167 aa20.95■□□□□ 0.94
ACTB-210ENST00000477812 THEGQ9P2T0 379 aa20.95■□□□□ 0.94
ACTB-210ENST00000477812 CHORDC1Q9UHD1 332 aaPredicted RBP20.95■□□□□ 0.94
ACTB-210ENST00000477812 NAGPAQ9UK23 515 aa20.95■□□□□ 0.94
ACTB-210ENST00000477812 UNC80Q8N2C7 3258 aa20.95■□□□□ 0.94
ACTB-210ENST00000477812 A0A1W2PQH9 124 aa20.94■□□□□ 0.94
ACTB-210ENST00000477812 GOLGA6L6A8MZA4 724 aa20.94■□□□□ 0.94
ACTB-210ENST00000477812 GSCP56915 257 aaPredicted RBP20.94■□□□□ 0.94
ACTB-210ENST00000477812 GFPT1Q06210 699 aaPredicted RBP20.94■□□□□ 0.94
ACTB-210ENST00000477812 PTCRAQ6ISU1 281 aaPredicted RBP20.94■□□□□ 0.94
ACTB-210ENST00000477812 HFE2Q6ZVN8 426 aa20.94■□□□□ 0.94
ACTB-210ENST00000477812 DNAAF5Q86Y56 855 aa20.94■□□□□ 0.94
ACTB-210ENST00000477812 MCOLN2Q8IZK6 566 aa20.94■□□□□ 0.94
ACTB-210ENST00000477812 KHSRPQ92945 711 aaKnown RBP eCLIP20.94■□□□□ 0.94
ACTB-210ENST00000477812 C18orf8Q96DM3 657 aa20.94■□□□□ 0.94
ACTB-210ENST00000477812 GCNAQ96QF7 691 aa20.94■□□□□ 0.94
ACTB-210ENST00000477812 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.94■□□□□ 0.94
ACTB-210ENST00000477812 ATXN3LQ9H3M9 355 aa20.94■□□□□ 0.94
ACTB-210ENST00000477812 TLR8Q9NR97 1041 aaKnown RBP20.94■□□□□ 0.94
ACTB-210ENST00000477812 TRPM5Q9NZQ8 1165 aa20.94■□□□□ 0.94
ACTB-210ENST00000477812 TCRBV5S1A1TA0A578 114 aa20.93■□□□□ 0.94
ACTB-210ENST00000477812 ZNF263O14978 683 aa20.93■□□□□ 0.94
ACTB-210ENST00000477812 SART1O43290 800 aaKnown RBP20.93■□□□□ 0.94
ACTB-210ENST00000477812 RTN2O75298 545 aa20.93■□□□□ 0.94
ACTB-210ENST00000477812 OLFM2O95897 454 aa20.93■□□□□ 0.94
ACTB-210ENST00000477812 OAS1P00973 400 aaKnown RBP20.93■□□□□ 0.94
ACTB-210ENST00000477812 SCNN1AP37088 669 aa20.93■□□□□ 0.94
ACTB-210ENST00000477812 TUBP50607 506 aa20.93■□□□□ 0.94
ACTB-210ENST00000477812 YWHAGP61981 247 aaKnown RBP eCLIP20.93■□□□□ 0.941e-10■□□□□ 9.7
ACTB-210ENST00000477812 PUS10Q3MIT2 529 aaKnown RBP20.93■□□□□ 0.94
ACTB-210ENST00000477812 PPP1R2P3Q6NXS1 205 aa20.93■□□□□ 0.94
ACTB-210ENST00000477812 GET4Q7L5D6 327 aaPredicted RBP20.93■□□□□ 0.94
ACTB-210ENST00000477812 SLC26A9Q7LBE3 791 aa20.93■□□□□ 0.94
ACTB-210ENST00000477812 ZDHHC17Q8IUH5 632 aa20.93■□□□□ 0.94
ACTB-210ENST00000477812 MSANTD4Q8NCY6 345 aa20.93■□□□□ 0.94
ACTB-210ENST00000477812 ING5Q8WYH8 240 aa20.93■□□□□ 0.94
ACTB-210ENST00000477812 FGF13Q92913 245 aa20.93■□□□□ 0.94
ACTB-210ENST00000477812 MCRS1Q96EZ8 462 aa20.93■□□□□ 0.94
ACTB-210ENST00000477812 CCDC42Q96M95 316 aa20.93■□□□□ 0.94
ACTB-210ENST00000477812 SYNCQ9H7C4 482 aa20.93■□□□□ 0.94
ACTB-210ENST00000477812 CLIC5Q9NZA1 410 aa20.93■□□□□ 0.94
ACTB-210ENST00000477812 ADAM22Q9P0K1 906 aa20.93■□□□□ 0.94
ACTB-210ENST00000477812 C2orf78A6NCI8 922 aa20.92■□□□□ 0.94
ACTB-210ENST00000477812 SOWAHDA6NJG2 315 aa20.92■□□□□ 0.94
ACTB-210ENST00000477812 TMCO5BA8MYB1 307 aa20.92■□□□□ 0.94
ACTB-210ENST00000477812 FTLP02792 175 aaPredicted RBP20.92■□□□□ 0.94
ACTB-210ENST00000477812 FYNP06241 537 aa20.92■□□□□ 0.94
ACTB-210ENST00000477812 PSEN1P49768 467 aa20.92■□□□□ 0.94
ACTB-210ENST00000477812 SNX16P57768 344 aa20.92■□□□□ 0.94
ACTB-210ENST00000477812 TAF5Q15542 800 aa20.92■□□□□ 0.94
ACTB-210ENST00000477812 BSPRYQ5W0U4 402 aa20.92■□□□□ 0.94
ACTB-210ENST00000477812 TXNDC8Q6A555 127 aa20.92■□□□□ 0.94
ACTB-210ENST00000477812 ALKBH5Q6P6C2 394 aaKnown RBP20.92■□□□□ 0.94
ACTB-210ENST00000477812 TMTC1Q8IUR5 882 aa20.92■□□□□ 0.94
ACTB-210ENST00000477812 ARHGAP18Q8N392 663 aa20.92■□□□□ 0.94
ACTB-210ENST00000477812 ZNF276Q8N554 614 aa20.92■□□□□ 0.94
ACTB-210ENST00000477812 MRPS31Q92665 395 aaKnown RBP20.92■□□□□ 0.94
ACTB-210ENST00000477812 VCPIP1Q96JH7 1222 aa20.92■□□□□ 0.94
ACTB-210ENST00000477812 ZSWIM3Q96MP5 696 aa20.92■□□□□ 0.94
ACTB-210ENST00000477812 SLC22A12Q96S37 553 aa20.92■□□□□ 0.94
ACTB-210ENST00000477812 MYADMQ96S97 322 aa20.92■□□□□ 0.94
ACTB-210ENST00000477812 BAG1Q99933 345 aaPredicted RBP20.92■□□□□ 0.94
ACTB-210ENST00000477812 SLC46A2Q9BY10 475 aa20.92■□□□□ 0.94
ACTB-210ENST00000477812 DEF6Q9H4E7 631 aa20.92■□□□□ 0.94
ACTB-210ENST00000477812 TASP1Q9H6P5 420 aa20.92■□□□□ 0.94
ACTB-210ENST00000477812 SPTLC3Q9NUV7 552 aa20.92■□□□□ 0.94
ACTB-210ENST00000477812 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.92■□□□□ 0.944e-25■□□□□ 10.3
ACTB-210ENST00000477812 ASNSD1Q9NWL6 643 aa20.92■□□□□ 0.94
ACTB-210ENST00000477812 CDH7Q9ULB5 785 aa20.92■□□□□ 0.94
ACTB-210ENST00000477812 SOBPA7XYQ1 873 aa20.91■□□□□ 0.94
ACTB-210ENST00000477812 AKR1B10O60218 316 aa20.91■□□□□ 0.94
ACTB-210ENST00000477812 LCA5LO95447 670 aa20.91■□□□□ 0.94
ACTB-210ENST00000477812 LTFP02788 710 aa20.91■□□□□ 0.94
ACTB-210ENST00000477812 CALB1P05937 261 aa20.91■□□□□ 0.94
ACTB-210ENST00000477812 DDX6P26196 483 aaKnown RBP eCLIP20.91■□□□□ 0.943e-35■■□□□ 11.9
ACTB-210ENST00000477812 KCNQ1P51787 676 aa20.91■□□□□ 0.94
ACTB-210ENST00000477812 SLC6A3Q01959 620 aa20.91■□□□□ 0.94
ACTB-210ENST00000477812 ZNF268Q14587 947 aaPredicted RBP20.91■□□□□ 0.94
ACTB-210ENST00000477812 GPR158Q5T848 1215 aa20.91■□□□□ 0.94
ACTB-210ENST00000477812 OR6B2Q6IFH4 312 aa20.91■□□□□ 0.94
ACTB-210ENST00000477812 RAD9BQ6WBX8 426 aa20.91■□□□□ 0.94
ACTB-210ENST00000477812 TOGARAM2Q6ZUX3 1019 aa20.91■□□□□ 0.94
ACTB-210ENST00000477812 BEND5Q7L4P6 421 aa20.91■□□□□ 0.94
ACTB-210ENST00000477812 CCDC170Q8IYT3 715 aa20.91■□□□□ 0.94
ACTB-210ENST00000477812 ANP32BQ92688 251 aaKnown RBP20.91■□□□□ 0.94
ACTB-210ENST00000477812 CCSER2Q9H7U1 834 aa20.91■□□□□ 0.94
ACTB-210ENST00000477812 STRIP2Q9ULQ0 834 aa20.91■□□□□ 0.94
ACTB-210ENST00000477812 USTQ9Y2C2 406 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms