RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 SERPINB12Q96P63 405 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 RBBP8Q99708 897 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 ZSWIM1Q9BR11 485 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 FOXP3Q9BZS1 431 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 A8MX80 341 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 DCDC2CA8MYV0 355 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 CXCL8P10145 99 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 RRM1P23921 792 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 STIP1P31948 543 aaKnown RBP11.31□□□□□ -0.6
VAPB-204ENST00000475243 TROAPQ12815 778 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 C9orf131Q5VYM1 1079 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 FGD2Q7Z6J4 655 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 CACUL1Q86Y37 369 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 ERGIC2Q96RQ1 377 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 MAP3K14Q99558 947 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 FICDQ9BVA6 458 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 KAT6AQ92794 2004 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 VDRP11473 427 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 ALDH9A1P49189 494 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 SCNN1BP51168 640 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 PHF21BQ96EK2 531 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 UTP6Q9NYH9 597 aaKnown RBP11.31□□□□□ -0.6
VAPB-204ENST00000475243 ADGRB3O60242 1522 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 KATNA1O75449 491 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 ACADMP11310 421 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 PSMA4P25789 261 aaKnown RBP11.31□□□□□ -0.6
VAPB-204ENST00000475243 BCAT1P54687 386 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 XRRA1Q6P2D8 792 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 RD3Q7Z3Z2 195 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 DEFB132Q7Z7B7 95 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 LRRC34Q8IZ02 419 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 SLC20A1Q8WUM9 679 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 DNAJB3Q8WWF6 145 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 RXFP2Q8WXD0 754 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 USP13Q92995 863 aaPredicted RBP11.31□□□□□ -0.6
VAPB-204ENST00000475243 ERCC6L2Q5T890 1561 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 LAMTOR4Q0VGL1 99 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 CEP78Q5JTW2 689 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 INTS5Q6P9B9 1019 aaKnown RBP11.31□□□□□ -0.6
VAPB-204ENST00000475243 SLC30A10Q6XR72 485 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 CELF6Q96J87 481 aaKnown RBP11.31□□□□□ -0.6
VAPB-204ENST00000475243 RNF19AQ9NV58 838 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.31□□□□□ -0.6
VAPB-204ENST00000475243 MGAT4DA6NG13 374 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 STAU1O95793 577 aaKnown RBP11.31□□□□□ -0.6
VAPB-204ENST00000475243 ABCB1P08183 1280 aaPredicted RBP11.31□□□□□ -0.6
VAPB-204ENST00000475243 ZNF23P17027 643 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 EPHX2P34913 555 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 OXCT1P55809 520 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 ZNF484Q5JVG2 852 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 CLEC17AQ6ZS10 378 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 BNIPLQ7Z465 357 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 AGBL3Q8NEM8 1001 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 MTERF3Q96E29 417 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 SEMA6BQ9H3T3 888 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 MYO10Q9HD67 2058 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 PQBP1O60828 265 aaKnown RBP11.31□□□□□ -0.6
VAPB-204ENST00000475243 RNASEH1O60930 286 aaKnown RBP11.31□□□□□ -0.6
VAPB-204ENST00000475243 CYP7B1O75881 506 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 ALDH2P05091 517 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 URODP06132 367 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 RHOCP08134 193 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 HPGDP15428 266 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 SERPINB8P50452 374 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 TIGD7Q6NT04 549 aaPredicted RBP11.31□□□□□ -0.6
VAPB-204ENST00000475243 SYN2Q92777 582 aaPredicted RBP11.31□□□□□ -0.6
VAPB-204ENST00000475243 TMEM176AQ96HP8 235 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 PPCSQ9HAB8 311 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 DLGAP2Q9P1A6 1054 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 AP4E1Q9UPM8 1137 aa11.31□□□□□ -0.6
VAPB-204ENST00000475243 SYNCRIPO60506 623 aaKnown RBP11.3□□□□□ -0.6
VAPB-204ENST00000475243 ZNF682O95780 498 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 CSHL1Q14406 222 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 LRRC8DQ7L1W4 858 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 ANKRD49Q8WVL7 239 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.3□□□□□ -0.65e-8■■■■■ 65.3
VAPB-204ENST00000475243 VPS9D1Q9Y2B5 631 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 CAMSAP1Q5T5Y3 1602 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 CKBP12277 381 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 MAPK9P45984 424 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 ZNF284Q2VY69 593 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 KHDRBS2Q5VWX1 349 aaKnown RBP11.3□□□□□ -0.6
VAPB-204ENST00000475243 ADAM32Q8TC27 787 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 TAS1R2Q8TE23 839 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 AGO4Q9HCK5 861 aaKnown RBP11.3□□□□□ -0.6
VAPB-204ENST00000475243 OLFML3Q9NRN5 406 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 NMRK1Q9NWW6 199 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 DDX43Q9NXZ2 648 aaKnown RBP11.3□□□□□ -0.6
VAPB-204ENST00000475243 GPRC5DQ9NZD1 345 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 CYP2C8P10632 490 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 CCNG1P51959 295 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 TCEA2Q15560 299 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 WLSQ5T9L3 541 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 MYO1HQ8N1T3 1032 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 MADDQ8WXG6 1647 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 ACAT1P24752 427 aaKnown RBP11.3□□□□□ -0.6
VAPB-204ENST00000475243 TKTL1P51854 596 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 EPHB3P54753 998 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 RDM1Q8NG50 284 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 STARD7Q9NQZ5 370 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms