RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 MYL6P60660 151 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 TNFAIP1Q13829 316 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 KCNJ11Q14654 390 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 INSCQ1MX18 579 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 ZNF699Q32M78 642 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 SUPT20HL1Q3ZLR7 823 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 LIN52Q52LA3 116 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 BOLA3Q53S33 107 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 PLEKHG4Q58EX7 1191 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 HP1BP3Q5SSJ5 553 aaPredicted RBP6.36□□□□□ -1.39
HERC4-209ENST00000473533 SWSAP1Q6NVH7 229 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 RSBN1LQ6PCB5 846 aaPredicted RBP6.36□□□□□ -1.39
HERC4-209ENST00000473533 PTF1AQ7RTS3 328 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 DHDDSQ86SQ9 333 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 ARID3BQ8IVW6 561 aaPredicted RBP6.36□□□□□ -1.39
HERC4-209ENST00000473533 HACE1Q8IYU2 909 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 PPM1NQ8N819 430 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 OR6Y1Q8NGX8 325 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 GSDMBQ8TAX9 411 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 OPTNQ96CV9 577 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 ZFRQ96KR1 1074 aaKnown RBP6.36□□□□□ -1.39
HERC4-209ENST00000473533 PRMT6Q96LA8 375 aaPredicted RBP6.36□□□□□ -1.39
HERC4-209ENST00000473533 NLRP4Q96MN2 994 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 THTPAQ9BU02 230 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 NMUR2Q9GZQ4 415 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 ZWILCHQ9H900 591 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 APOBEC3GQ9HC16 384 aaKnown RBP6.36□□□□□ -1.39
HERC4-209ENST00000473533 CISHQ9NSE2 258 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 PLK2Q9NYY3 685 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 DCDC2Q9UHG0 476 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 SCN4AP35499 1836 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 ARHGAP42A6NI28 874 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 C3orf70A6NLC5 250 aaPredicted RBP6.36□□□□□ -1.39
HERC4-209ENST00000473533 GOLGA8RI6L899 631 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 OGTO15294 1046 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 STRNO43815 780 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 PRPSAP2O60256 369 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 CCNT2O60583 730 aaKnown RBP6.36□□□□□ -1.39
HERC4-209ENST00000473533 TOM1L1O75674 476 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 PENKP01210 267 aaPredicted RBP6.36□□□□□ -1.39
HERC4-209ENST00000473533 OATP04181 439 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 BPGMP07738 259 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 TPSB2P20231 275 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 GSTT1P30711 240 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 RGS2P41220 211 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 TGFB2P61812 414 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 DYNLT1P63172 113 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 JAG1P78504 1218 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 BST1Q10588 318 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 KRT81Q14533 505 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 TPSAB1Q15661 275 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 CHI3L2Q15782 390 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 ZYXQ15942 572 aaKnown RBP6.36□□□□□ -1.39
HERC4-209ENST00000473533 KYAT1Q16773 422 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 SLC5A9Q2M3M2 681 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 CCDC14Q49A88 953 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 CPXCR1Q8N123 301 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 GLIS1Q8NBF1 620 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 ICA1LQ8NDH6 482 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 DTX3LQ8TDB6 740 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 CNPY3Q9BT09 278 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 ZNF341Q9BYN7 854 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 CYP3A43Q9HB55 503 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 AS3MTQ9HBK9 375 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 S100A14Q9HCY8 104 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 MRPL40Q9NQ50 206 aaKnown RBP6.36□□□□□ -1.39
HERC4-209ENST00000473533 DNAJC28Q9NX36 388 aa6.36□□□□□ -1.39
HERC4-209ENST00000473533 HBS1LQ9Y450 684 aaKnown RBP6.36□□□□□ -1.39
HERC4-209ENST00000473533 BCLAF3A2AJT9 711 aaKnown RBP6.35□□□□□ -1.39
HERC4-209ENST00000473533 SLC22A2O15244 555 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 OPHN1O60890 802 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 LRCH4O75427 683 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 ERBB2P04626 1255 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 UQCRBP14927 111 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 CD19P15391 556 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 MX2P20592 715 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 GABRB2P47870 512 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 ACOT2P49753 483 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 MAP3K10Q02779 954 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 ZNF252P-AS1Q0IIN9 211 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 SPP2Q13103 211 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 LAMB3Q13751 1172 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 MTERF2Q49AM1 385 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 ATP13A4Q4VNC1 1196 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 TMEM259Q4ZIN3 620 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 SPOPLQ6IQ16 392 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 ZFP1Q6P2D0 407 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 EP400NLQ6ZTU2 488 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 LCA5Q86VQ0 697 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 EGFL6Q8IUX8 553 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 FAM71DQ8N9W8 422 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 RBM15BQ8NDT2 890 aaKnown RBP6.35□□□□□ -1.39
HERC4-209ENST00000473533 PIWIL2Q8TC59 973 aaKnown RBP6.35□□□□□ -1.39
HERC4-209ENST00000473533 DDI1Q8WTU0 396 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 FAM172AQ8WUF8 416 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 AFG1LQ8WV93 481 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 CFAP36Q96G28 342 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 SPATA16Q9BXB7 569 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 CALN1Q9BXU9 219 aa6.35□□□□□ -1.39
HERC4-209ENST00000473533 XPNPEP1Q9NQW7 623 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms