RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 ADH1CP00326 375 aa16.17■□□□□ 0.18
VTI1A-203ENST00000472892 CCDC192P0DO97 292 aa16.17■□□□□ 0.18
VTI1A-203ENST00000472892 CD44P16070 742 aaKnown RBP16.17■□□□□ 0.18
VTI1A-203ENST00000472892 TRIM21P19474 475 aaKnown RBP16.17■□□□□ 0.18
VTI1A-203ENST00000472892 MRPS21P82921 87 aaKnown RBP16.17■□□□□ 0.18
VTI1A-203ENST00000472892 C2orf27AQ580R0 203 aa16.17■□□□□ 0.18
VTI1A-203ENST00000472892 KRT39Q6A163 491 aa16.17■□□□□ 0.18
VTI1A-203ENST00000472892 PRR23CQ6ZRP0 262 aa16.17■□□□□ 0.18
VTI1A-203ENST00000472892 CLEC20AQ6ZU45 233 aa16.17■□□□□ 0.18
VTI1A-203ENST00000472892 FMR1NBQ8N0W7 255 aaPredicted RBP16.17■□□□□ 0.18
VTI1A-203ENST00000472892 NETO1Q8TDF5 533 aa16.17■□□□□ 0.18
VTI1A-203ENST00000472892 FAXDC2Q96IV6 333 aa16.17■□□□□ 0.18
VTI1A-203ENST00000472892 PNKPQ96T60 521 aa16.17■□□□□ 0.18
VTI1A-203ENST00000472892 NIF3L1Q9GZT8 377 aa16.17■□□□□ 0.18
VTI1A-203ENST00000472892 ANTXRLA6NF34 631 aa16.16■□□□□ 0.18
VTI1A-203ENST00000472892 HHLA1C9JL84 531 aa16.16■□□□□ 0.18
VTI1A-203ENST00000472892 CILPO75339 1184 aa16.16■□□□□ 0.18
VTI1A-203ENST00000472892 FAM200BP0CF97 657 aa16.16■□□□□ 0.18
VTI1A-203ENST00000472892 ADORA2BP29275 332 aa16.16■□□□□ 0.18
VTI1A-203ENST00000472892 PNOCQ13519 176 aa16.16■□□□□ 0.18
VTI1A-203ENST00000472892 C12orf40Q86WS4 652 aa16.16■□□□□ 0.18
VTI1A-203ENST00000472892 SMYD4Q8IYR2 804 aaPredicted RBP16.16■□□□□ 0.18
VTI1A-203ENST00000472892 CCDC150Q8NCX0 1101 aa16.16■□□□□ 0.18
VTI1A-203ENST00000472892 SEMA4DQ92854 862 aa16.16■□□□□ 0.18
VTI1A-203ENST00000472892 ARRDC1-AS1Q9H2J1 176 aa16.16■□□□□ 0.18
VTI1A-203ENST00000472892 PNPLA8Q9NP80 782 aa16.16■□□□□ 0.18
VTI1A-203ENST00000472892 CYLDQ9NQC7 956 aa16.16■□□□□ 0.18
VTI1A-203ENST00000472892 TLR8Q9NR97 1041 aaKnown RBP16.16■□□□□ 0.18
VTI1A-203ENST00000472892 SCML2Q9UQR0 700 aa16.16■□□□□ 0.18
VTI1A-203ENST00000472892 SH3BP1Q9Y3L3 701 aa16.16■□□□□ 0.18
VTI1A-203ENST00000472892 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.15■□□□□ 0.18
VTI1A-203ENST00000472892 SLC30A4O14863 429 aa16.15■□□□□ 0.18
VTI1A-203ENST00000472892 CETN3O15182 167 aa16.15■□□□□ 0.18
VTI1A-203ENST00000472892 GREM1O60565 184 aa16.15■□□□□ 0.18
VTI1A-203ENST00000472892 TLR5O60602 858 aa16.15■□□□□ 0.18
VTI1A-203ENST00000472892 EPN2O95208 641 aa16.15■□□□□ 0.18
VTI1A-203ENST00000472892 KAT7O95251 611 aa16.15■□□□□ 0.18
VTI1A-203ENST00000472892 CHRM1P11229 460 aaPredicted RBP16.15■□□□□ 0.18
VTI1A-203ENST00000472892 ADH5P11766 374 aa16.15■□□□□ 0.18
VTI1A-203ENST00000472892 GRIA2P42262 883 aa16.15■□□□□ 0.18
VTI1A-203ENST00000472892 PRCPP42785 496 aa16.15■□□□□ 0.18
VTI1A-203ENST00000472892 SEC13P55735 322 aa16.15■□□□□ 0.18
VTI1A-203ENST00000472892 GAD2Q05329 585 aa16.15■□□□□ 0.18
VTI1A-203ENST00000472892 MESP2Q0VG99 397 aa16.15■□□□□ 0.18
VTI1A-203ENST00000472892 PLK5Q496M5 336 aa16.15■□□□□ 0.18
VTI1A-203ENST00000472892 COBLL1Q53SF7 1204 aa16.15■□□□□ 0.18
VTI1A-203ENST00000472892 LY6G5CQ5SRR4 150 aa16.15■□□□□ 0.18
VTI1A-203ENST00000472892 HTR3DQ70Z44 454 aa16.15■□□□□ 0.18
VTI1A-203ENST00000472892 GPRIN1Q7Z2K8 1008 aa16.15■□□□□ 0.18
VTI1A-203ENST00000472892 RASSF3Q86WH2 238 aa16.15■□□□□ 0.18
VTI1A-203ENST00000472892 SFTPA1Q8IWL2 248 aa16.15■□□□□ 0.18
VTI1A-203ENST00000472892 BBS7Q8IWZ6 715 aa16.15■□□□□ 0.18
VTI1A-203ENST00000472892 ENGASEQ8NFI3 743 aa16.15■□□□□ 0.18
VTI1A-203ENST00000472892 TSTD1Q8NFU3 115 aa16.15■□□□□ 0.18
VTI1A-203ENST00000472892 WBP2Q969T9 261 aa16.15■□□□□ 0.18
VTI1A-203ENST00000472892 EEF2KMTQ96G04 330 aa16.15■□□□□ 0.18
VTI1A-203ENST00000472892 GSDMAQ96QA5 445 aa16.15■□□□□ 0.18
VTI1A-203ENST00000472892 KLF16Q9BXK1 252 aaPredicted RBP16.15■□□□□ 0.18
VTI1A-203ENST00000472892 NACA2Q9H009 215 aa16.15■□□□□ 0.18
VTI1A-203ENST00000472892 MMRN2Q9H8L6 949 aa16.15■□□□□ 0.18
VTI1A-203ENST00000472892 RMND1Q9NWS8 449 aa16.15■□□□□ 0.18
VTI1A-203ENST00000472892 OSER1Q9NX31 292 aa16.15■□□□□ 0.18
VTI1A-203ENST00000472892 MMP17Q9ULZ9 603 aa16.15■□□□□ 0.18
VTI1A-203ENST00000472892 PCDHGA5Q9Y5G8 931 aa16.15■□□□□ 0.18
VTI1A-203ENST00000472892 PCDHA5Q9Y5H7 936 aa16.15■□□□□ 0.18
VTI1A-203ENST00000472892 DCDC2BA2VCK2 349 aa16.14■□□□□ 0.17
VTI1A-203ENST00000472892 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.14■□□□□ 0.17
VTI1A-203ENST00000472892 TBX18O95935 607 aa16.14■□□□□ 0.17
VTI1A-203ENST00000472892 APODP05090 189 aa16.14■□□□□ 0.17
VTI1A-203ENST00000472892 ZNF806P0C7X5 589 aa16.14■□□□□ 0.17
VTI1A-203ENST00000472892 CD58P19256 250 aa16.14■□□□□ 0.17
VTI1A-203ENST00000472892 ATP5C1P36542 298 aaKnown RBP16.14■□□□□ 0.17
VTI1A-203ENST00000472892 TNFRSF4P43489 277 aa16.14■□□□□ 0.17
VTI1A-203ENST00000472892 KIF11P52732 1056 aa16.14■□□□□ 0.17
VTI1A-203ENST00000472892 CRY1Q16526 586 aa16.14■□□□□ 0.17
VTI1A-203ENST00000472892 HSF5Q4G112 596 aaPredicted RBP16.14■□□□□ 0.17
VTI1A-203ENST00000472892 PLA2G2CQ5R387 149 aa16.14■□□□□ 0.17
VTI1A-203ENST00000472892 ZNF658Q5TYW1 1059 aaPredicted RBP16.14■□□□□ 0.17
VTI1A-203ENST00000472892 ETFBKMTQ8IXQ9 262 aa16.14■□□□□ 0.17
VTI1A-203ENST00000472892 PHTF2Q8N3S3 785 aa16.14■□□□□ 0.17
VTI1A-203ENST00000472892 TTC39CQ8N584 583 aa16.14■□□□□ 0.17
VTI1A-203ENST00000472892 CCDC33Q8N5R6 958 aa16.14■□□□□ 0.17
VTI1A-203ENST00000472892 FBXL13Q8NEE6 735 aa16.14■□□□□ 0.17
VTI1A-203ENST00000472892 SPATA20Q8TB22 786 aa16.14■□□□□ 0.17
VTI1A-203ENST00000472892 DUSP16Q9BY84 665 aa16.14■□□□□ 0.17
VTI1A-203ENST00000472892 DNAI2Q9GZS0 605 aa16.14■□□□□ 0.17
VTI1A-203ENST00000472892 DUSP15Q9H1R2 295 aaPredicted RBP16.14■□□□□ 0.17
VTI1A-203ENST00000472892 ARHGEF4Q9NR80 690 aa16.14■□□□□ 0.17
VTI1A-203ENST00000472892 SPHK2Q9NRA0 654 aa16.14■□□□□ 0.17
VTI1A-203ENST00000472892 RAB20Q9NX57 234 aa16.14■□□□□ 0.17
VTI1A-203ENST00000472892 DCLK1O15075 740 aa16.13■□□□□ 0.17
VTI1A-203ENST00000472892 CYP26A1O43174 497 aa16.13■□□□□ 0.17
VTI1A-203ENST00000472892 HOXC11O43248 304 aaPredicted RBP16.13■□□□□ 0.17
VTI1A-203ENST00000472892 GDF9O60383 454 aa16.13■□□□□ 0.17
VTI1A-203ENST00000472892 STX10O60499 249 aa16.13■□□□□ 0.17
VTI1A-203ENST00000472892 EPB41P11171 864 aaKnown RBP16.13■□□□□ 0.17
VTI1A-203ENST00000472892 ACO1P21399 889 aaKnown RBP16.13■□□□□ 0.17
VTI1A-203ENST00000472892 KIR2DL1P43626 348 aaPredicted RBP16.13■□□□□ 0.17
VTI1A-203ENST00000472892 MXI1P50539 228 aa16.13■□□□□ 0.17
VTI1A-203ENST00000472892 DGKEP52429 567 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms