RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 CPNE5Q9HCH3 593 aa6.7□□□□□ -1.34
CLK1-209ENST00000472679 ZBTB26Q9HCK0 441 aa6.7□□□□□ -1.34
CLK1-209ENST00000472679 ARFGAP3Q9NP61 516 aa6.7□□□□□ -1.34
CLK1-209ENST00000472679 PLCB1Q9NQ66 1216 aa6.7□□□□□ -1.34
CLK1-209ENST00000472679 SLC17A6Q9P2U8 582 aa6.7□□□□□ -1.34
CLK1-209ENST00000472679 QSOX1O00391 747 aa6.69□□□□□ -1.34
CLK1-209ENST00000472679 ZNF213O14771 459 aa6.69□□□□□ -1.34
CLK1-209ENST00000472679 SPRY2O43597 315 aa6.69□□□□□ -1.34
CLK1-209ENST00000472679 COQ9O75208 318 aa6.69□□□□□ -1.34
CLK1-209ENST00000472679 PDE8BO95263 885 aa6.69□□□□□ -1.34
CLK1-209ENST00000472679 HTR7P34969 479 aa6.69□□□□□ -1.34
CLK1-209ENST00000472679 EEFSECP57772 596 aaKnown RBP6.69□□□□□ -1.34
CLK1-209ENST00000472679 ARHGAP15Q53QZ3 475 aa6.69□□□□□ -1.34
CLK1-209ENST00000472679 PCID2Q5JVF3 399 aa6.69□□□□□ -1.34
CLK1-209ENST00000472679 TMTC4Q5T4D3 741 aa6.69□□□□□ -1.34
CLK1-209ENST00000472679 ABLIM2Q6H8Q1 611 aa6.69□□□□□ -1.34
CLK1-209ENST00000472679 FBXO38Q6PIJ6 1188 aa6.69□□□□□ -1.34
CLK1-209ENST00000472679 C1orf228Q6PIY5 440 aa6.69□□□□□ -1.34
CLK1-209ENST00000472679 USP17L6PQ6QN14 398 aa6.69□□□□□ -1.34
CLK1-209ENST00000472679 GRASPQ7Z6J2 395 aaPredicted RBP6.69□□□□□ -1.34
CLK1-209ENST00000472679 SYTL1Q8IYJ3 562 aa6.69□□□□□ -1.34
CLK1-209ENST00000472679 TIMP4Q99727 224 aa6.69□□□□□ -1.34
CLK1-209ENST00000472679 MACROD1Q9BQ69 325 aa6.69□□□□□ -1.34
CLK1-209ENST00000472679 TTLL2Q9BWV7 592 aa6.69□□□□□ -1.34
CLK1-209ENST00000472679 FSD1LQ9BXM9 530 aa6.69□□□□□ -1.34
CLK1-209ENST00000472679 EIF2AQ9BY44 585 aaKnown RBP6.69□□□□□ -1.34
CLK1-209ENST00000472679 STK33Q9BYT3 514 aa6.69□□□□□ -1.34
CLK1-209ENST00000472679 ZNHIT2Q9UHR6 403 aa6.69□□□□□ -1.34
CLK1-209ENST00000472679 SLC39A10Q9ULF5 831 aa6.69□□□□□ -1.34
CLK1-209ENST00000472679 ADAMTS5Q9UNA0 930 aa6.69□□□□□ -1.34
CLK1-209ENST00000472679 GCOM1H8Y6P7 765 aaPredicted RBP6.68□□□□□ -1.34
CLK1-209ENST00000472679 PSMD9O00233 223 aa6.68□□□□□ -1.34
CLK1-209ENST00000472679 SNX2O60749 519 aa6.68□□□□□ -1.34
CLK1-209ENST00000472679 C1QL1O75973 258 aa6.68□□□□□ -1.34
CLK1-209ENST00000472679 TJP3O95049 919 aa6.68□□□□□ -1.34
CLK1-209ENST00000472679 PRKCBP05771 671 aa6.68□□□□□ -1.34
CLK1-209ENST00000472679 EGR1P18146 543 aa6.68□□□□□ -1.34
CLK1-209ENST00000472679 BMP5P22003 454 aa6.68□□□□□ -1.34
CLK1-209ENST00000472679 FPR3P25089 353 aa6.68□□□□□ -1.34
CLK1-209ENST00000472679 RBL1P28749 1068 aa6.68□□□□□ -1.34
CLK1-209ENST00000472679 TECP42680 631 aa6.68□□□□□ -1.34
CLK1-209ENST00000472679 PSG6Q00889 435 aa6.68□□□□□ -1.34
CLK1-209ENST00000472679 RAB30Q15771 203 aa6.68□□□□□ -1.34
CLK1-209ENST00000472679 AKNAD1Q5T1N1 836 aa6.68□□□□□ -1.34
CLK1-209ENST00000472679 L1TD1Q5T7N2 865 aaKnown RBP6.68□□□□□ -1.34
CLK1-209ENST00000472679 MRNIPQ6NTE8 343 aa6.68□□□□□ -1.34
CLK1-209ENST00000472679 AMIGO2Q86SJ2 522 aa6.68□□□□□ -1.34
CLK1-209ENST00000472679 ARHGEF25Q86VW2 580 aa6.68□□□□□ -1.34
CLK1-209ENST00000472679 FAM98AQ8NCA5 519 aaKnown RBP6.68□□□□□ -1.34
CLK1-209ENST00000472679 MBD3L2Q8NHZ7 208 aaPredicted RBP6.68□□□□□ -1.34
CLK1-209ENST00000472679 IPO4Q8TEX9 1081 aaKnown RBP6.68□□□□□ -1.34
CLK1-209ENST00000472679 TMEM41AQ96HV5 264 aa6.68□□□□□ -1.34
CLK1-209ENST00000472679 UROC1Q96N76 676 aa6.68□□□□□ -1.34
CLK1-209ENST00000472679 THAP7Q9BT49 309 aaPredicted RBP6.68□□□□□ -1.34
CLK1-209ENST00000472679 CRB3Q9BUF7 120 aa6.68□□□□□ -1.34
CLK1-209ENST00000472679 IGSF9Q9P2J2 1179 aa6.68□□□□□ -1.34
CLK1-209ENST00000472679 INSL6Q9Y581 213 aa6.68□□□□□ -1.34
CLK1-209ENST00000472679 HNRNPDLO14979 420 aaKnown RBP6.67□□□□□ -1.34
CLK1-209ENST00000472679 ADAMTS3O15072 1205 aa6.67□□□□□ -1.34
CLK1-209ENST00000472679 CYP4F2P78329 520 aa6.67□□□□□ -1.34
CLK1-209ENST00000472679 GPS1Q13098 491 aa6.67□□□□□ -1.34
CLK1-209ENST00000472679 MAPKAPK3Q16644 382 aa6.67□□□□□ -1.34
CLK1-209ENST00000472679 SLC5A9Q2M3M2 681 aa6.67□□□□□ -1.34
CLK1-209ENST00000472679 FAM153CQ494X1 144 aa6.67□□□□□ -1.34
CLK1-209ENST00000472679 AARS2Q5JTZ9 985 aaKnown RBP6.67□□□□□ -1.34
CLK1-209ENST00000472679 C10orf62Q5T681 223 aaPredicted RBP6.67□□□□□ -1.34
CLK1-209ENST00000472679 GGT6Q6P531 493 aa6.67□□□□□ -1.34
CLK1-209ENST00000472679 NAPRTQ6XQN6 538 aa6.67□□□□□ -1.34
CLK1-209ENST00000472679 RAB11FIP4Q86YS3 637 aa6.67□□□□□ -1.34
CLK1-209ENST00000472679 ABHD11Q8NFV4 315 aa6.67□□□□□ -1.34
CLK1-209ENST00000472679 SUN3Q8TAQ9 357 aa6.67□□□□□ -1.34
CLK1-209ENST00000472679 MUL1Q969V5 352 aa6.67□□□□□ -1.34
CLK1-209ENST00000472679 BBC3Q96PG8 261 aaPredicted RBP6.67□□□□□ -1.34
CLK1-209ENST00000472679 SEMA4GQ9NTN9 838 aa6.67□□□□□ -1.34
CLK1-209ENST00000472679 ASAP1Q9ULH1 1129 aa6.67□□□□□ -1.34
CLK1-209ENST00000472679 LRCH1Q9Y2L9 728 aa6.67□□□□□ -1.34
CLK1-209ENST00000472679 KAT6AQ92794 2004 aa6.67□□□□□ -1.34
CLK1-209ENST00000472679 COL15A1P39059 1388 aa6.67□□□□□ -1.34
CLK1-209ENST00000472679 A0A087WV62 115 aa6.66□□□□□ -1.34
CLK1-209ENST00000472679 CES2O00748 559 aa6.66□□□□□ -1.34
CLK1-209ENST00000472679 NUDT3O95989 172 aa6.66□□□□□ -1.34
CLK1-209ENST00000472679 LDHAP00338 332 aaKnown RBP6.66□□□□□ -1.34
CLK1-209ENST00000472679 HNRNPCP07910 306 aaKnown RBP eCLIP6.66□□□□□ -1.34
CLK1-209ENST00000472679 DLDP09622 509 aaKnown RBP6.66□□□□□ -1.34
CLK1-209ENST00000472679 NPSP0C0P6 89 aa6.66□□□□□ -1.34
CLK1-209ENST00000472679 IDEP14735 1019 aa6.66□□□□□ -1.34
CLK1-209ENST00000472679 CREB1P16220 341 aa6.66□□□□□ -1.34
CLK1-209ENST00000472679 MCM5P33992 734 aa6.66□□□□□ -1.34
CLK1-209ENST00000472679 DEUP1Q05D60 604 aa6.66□□□□□ -1.34
CLK1-209ENST00000472679 STARD3Q14849 445 aa6.66□□□□□ -1.34
CLK1-209ENST00000472679 RNASE12Q5GAN4 147 aaKnown RBP6.66□□□□□ -1.34
CLK1-209ENST00000472679 FSTL5Q8N475 847 aaPredicted RBP6.66□□□□□ -1.34
CLK1-209ENST00000472679 SIRT6Q8N6T7 355 aa6.66□□□□□ -1.34
CLK1-209ENST00000472679 R3HDMLQ9H3Y0 253 aa6.66□□□□□ -1.34
CLK1-209ENST00000472679 RIOX1Q9H6W3 641 aa6.66□□□□□ -1.34
CLK1-209ENST00000472679 NECTIN3Q9NQS3 549 aa6.66□□□□□ -1.34
CLK1-209ENST00000472679 TM7SF3Q9NS93 570 aa6.66□□□□□ -1.34
CLK1-209ENST00000472679 TMOD4Q9NZQ9 345 aa6.66□□□□□ -1.34
CLK1-209ENST00000472679 AMFRQ9UKV5 643 aa6.66□□□□□ -1.34
CLK1-209ENST00000472679 COL11A2P13942 1736 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms