RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 PRPF39Q86UA1 669 aaKnown RBP14.21□□□□□ -0.13
BRCA1-209ENST00000470026 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.21□□□□□ -0.13
BRCA1-209ENST00000470026 TMEM130Q8N3G9 435 aa14.21□□□□□ -0.13
BRCA1-209ENST00000470026 PQLC3Q8N755 202 aa14.21□□□□□ -0.13
BRCA1-209ENST00000470026 FAF2Q96CS3 445 aa14.21□□□□□ -0.13
BRCA1-209ENST00000470026 NAF1Q96HR8 494 aaKnown RBP14.21□□□□□ -0.13
BRCA1-209ENST00000470026 FAM111AQ96PZ2 611 aa14.21□□□□□ -0.13
BRCA1-209ENST00000470026 NUDCD1Q96RS6 583 aa14.21□□□□□ -0.13
BRCA1-209ENST00000470026 MIS12Q9H081 205 aa14.21□□□□□ -0.13
BRCA1-209ENST00000470026 IFT122Q9HBG6 1241 aa14.21□□□□□ -0.13
BRCA1-209ENST00000470026 ARL8BQ9NVJ2 186 aa14.21□□□□□ -0.13
BRCA1-209ENST00000470026 BARX2Q9UMQ3 279 aaPredicted RBP14.21□□□□□ -0.13
BRCA1-209ENST00000470026 SUFUQ9UMX1 484 aa14.21□□□□□ -0.13
BRCA1-209ENST00000470026 IRF6O14896 467 aa14.21□□□□□ -0.13
BRCA1-209ENST00000470026 CNMDO75829 334 aa14.21□□□□□ -0.13
BRCA1-209ENST00000470026 LUC7L3O95232 432 aaKnown RBP14.21□□□□□ -0.13
BRCA1-209ENST00000470026 P4HA1P13674 534 aa14.21□□□□□ -0.13
BRCA1-209ENST00000470026 MAGEA3P43357 314 aa14.21□□□□□ -0.13
BRCA1-209ENST00000470026 TNFAIP2Q03169 654 aa14.21□□□□□ -0.13
BRCA1-209ENST00000470026 BLMHQ13867 455 aa14.21□□□□□ -0.13
BRCA1-209ENST00000470026 RAB6CQ53S08 254 aa14.21□□□□□ -0.13
BRCA1-209ENST00000470026 EFCAB12Q6NXP0 572 aa14.21□□□□□ -0.13
BRCA1-209ENST00000470026 EEPD1Q7L9B9 569 aa14.21□□□□□ -0.13
BRCA1-209ENST00000470026 ZC3H18Q86VM9 953 aaKnown RBP14.21□□□□□ -0.13
BRCA1-209ENST00000470026 CAND1Q86VP6 1230 aaKnown RBP14.21□□□□□ -0.13
BRCA1-209ENST00000470026 NCAPG2Q86XI2 1143 aa14.21□□□□□ -0.13
BRCA1-209ENST00000470026 MCUQ8NE86 351 aa14.21□□□□□ -0.13
BRCA1-209ENST00000470026 AFG1LQ8WV93 481 aa14.21□□□□□ -0.13
BRCA1-209ENST00000470026 TRAPPC12Q8WVT3 735 aa14.21□□□□□ -0.13
BRCA1-209ENST00000470026 LRRC39Q96DD0 335 aa14.21□□□□□ -0.13
BRCA1-209ENST00000470026 NSL1Q96IY1 281 aa14.21□□□□□ -0.13
BRCA1-209ENST00000470026 TMEM120AQ9BXJ8 343 aa14.21□□□□□ -0.13
BRCA1-209ENST00000470026 RAB6CQ9H0N0 254 aa14.21□□□□□ -0.13
BRCA1-209ENST00000470026 IKBKGQ9Y6K9 419 aa14.21□□□□□ -0.13
BRCA1-209ENST00000470026 A0A0G2JND7 137 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 NOP56O00567 594 aaKnown RBP14.2□□□□□ -0.14
BRCA1-209ENST00000470026 C22orf31O95567 290 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 PDGFRAP16234 1089 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 BGNP21810 368 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 YWHAGP61981 247 aaKnown RBP eCLIP14.2□□□□□ -0.14
BRCA1-209ENST00000470026 CDK18Q07002 472 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 SLC10A6Q3KNW5 377 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 CCDC14Q49A88 953 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 BOLA3Q53S33 107 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 CDHR3Q6ZTQ4 885 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 FAM183BPQ6ZVS7 135 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 MAP7D3Q8IWC1 876 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 TTC39CQ8N584 583 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 LINC01465Q8N7H1 131 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 TTC8Q8TAM2 541 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 UBA3Q8TBC4 463 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 PIWIL1Q96J94 861 aaKnown RBP14.2□□□□□ -0.14
BRCA1-209ENST00000470026 C7orf26Q96N11 449 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 TBCBQ99426 244 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 ASCC2Q9H1I8 757 aaPredicted RBP14.2□□□□□ -0.14
BRCA1-209ENST00000470026 MMADHCQ9H3L0 296 aaPredicted RBP14.2□□□□□ -0.14
BRCA1-209ENST00000470026 SMARCAD1Q9H4L7 1026 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 DCLRE1BQ9H816 532 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 RAB6BQ9NRW1 208 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 GGA3Q9NZ52 723 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 DNAJC25-GNG10A0A024R161 153 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 E5RJQ4 531 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 H7C0C1 242 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 GSC2O15499 205 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 PRPSAP2O60256 369 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 SNRPAP09012 282 aaKnown RBP14.2□□□□□ -0.14
BRCA1-209ENST00000470026 SERPINB3P29508 390 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 ABL2P42684 1182 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 ATP5OP48047 213 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 CLCN3P51790 818 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 VGLL4Q14135 290 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 TAF11Q15544 211 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 C15orf59Q2T9L4 293 aaPredicted RBP14.2□□□□□ -0.14
BRCA1-209ENST00000470026 PKDCCQ504Y2 493 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 C4orf22Q6V702 233 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 KIRREL3Q8IZU9 778 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 KHSRPQ92945 711 aaKnown RBP eCLIP14.2□□□□□ -0.14
BRCA1-209ENST00000470026 HPDLQ96IR7 371 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 HEXIM2Q96MH2 286 aaKnown RBP14.2□□□□□ -0.14
BRCA1-209ENST00000470026 SRPK1Q96SB4 655 aaKnown RBP14.2□□□□□ -0.14
BRCA1-209ENST00000470026 R3HDMLQ9H3Y0 253 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 PDZD7Q9H5P4 517 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 PCDH18Q9HCL0 1135 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 ALG13Q9NP73 1137 aaKnown RBP14.2□□□□□ -0.14
BRCA1-209ENST00000470026 PLLPQ9Y342 182 aa14.2□□□□□ -0.14
BRCA1-209ENST00000470026 ENTPD5O75356 428 aa14.19□□□□□ -0.14
BRCA1-209ENST00000470026 AVILO75366 819 aa14.19□□□□□ -0.14
BRCA1-209ENST00000470026 SMNDC1O75940 238 aaKnown RBP eCLIP14.19□□□□□ -0.14
BRCA1-209ENST00000470026 NDST1P52848 882 aa14.19□□□□□ -0.14
BRCA1-209ENST00000470026 STILQ15468 1287 aa14.19□□□□□ -0.14
BRCA1-209ENST00000470026 KYAT1Q16773 422 aa14.19□□□□□ -0.14
BRCA1-209ENST00000470026 TEX9Q8N6V9 391 aa14.19□□□□□ -0.14
BRCA1-209ENST00000470026 PCDH19Q8TAB3 1148 aa14.19□□□□□ -0.14
BRCA1-209ENST00000470026 KCNV2Q8TDN2 545 aa14.19□□□□□ -0.14
BRCA1-209ENST00000470026 ZNF668Q96K58 619 aaPredicted RBP14.19□□□□□ -0.14
BRCA1-209ENST00000470026 SPATA33Q96N06 139 aa14.19□□□□□ -0.14
BRCA1-209ENST00000470026 MPHOSPH6Q99547 160 aaKnown RBP14.19□□□□□ -0.14
BRCA1-209ENST00000470026 ETNK2Q9NVF9 386 aa14.19□□□□□ -0.14
BRCA1-209ENST00000470026 ITGA11Q9UKX5 1188 aa14.19□□□□□ -0.14
BRCA1-209ENST00000470026 C2CD2Q9Y426 696 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms