RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 MAPK13O15264 365 aa25.91■■□□□ 1.74
PTCH1-210ENST00000468211 KAT7O95251 611 aa25.91■■□□□ 1.74
PTCH1-210ENST00000468211 ADORA2BP29275 332 aa25.91■■□□□ 1.74
PTCH1-210ENST00000468211 KDSRQ06136 332 aa25.91■■□□□ 1.74
PTCH1-210ENST00000468211 AASDHQ4L235 1098 aaPredicted RBP25.91■■□□□ 1.74
PTCH1-210ENST00000468211 BBS7Q8IWZ6 715 aa25.91■■□□□ 1.74
PTCH1-210ENST00000468211 PHTF2Q8N3S3 785 aa25.91■■□□□ 1.74
PTCH1-210ENST00000468211 ALLCQ8N6M5 410 aa25.91■■□□□ 1.74
PTCH1-210ENST00000468211 TAS1R2Q8TE23 839 aa25.91■■□□□ 1.74
PTCH1-210ENST00000468211 COMMD8Q9NX08 183 aa25.91■■□□□ 1.74
PTCH1-210ENST00000468211 TBC1D14Q9P2M4 693 aa25.91■■□□□ 1.74
PTCH1-210ENST00000468211 FOXD2O60548 495 aaPredicted RBP25.9■■□□□ 1.74
PTCH1-210ENST00000468211 ADH1CP00326 375 aa25.9■■□□□ 1.74
PTCH1-210ENST00000468211 MPLP40238 635 aa25.9■■□□□ 1.74
PTCH1-210ENST00000468211 TUBP50607 506 aa25.9■■□□□ 1.74
PTCH1-210ENST00000468211 INCA1Q0VD86 236 aa25.9■■□□□ 1.74
PTCH1-210ENST00000468211 NFIL3Q16649 462 aa25.9■■□□□ 1.74
PTCH1-210ENST00000468211 PPM1JQ5JR12 505 aa25.9■■□□□ 1.74
PTCH1-210ENST00000468211 TCEAL6Q6IPX3 200 aa25.9■■□□□ 1.74
PTCH1-210ENST00000468211 ANO7Q6IWH7 933 aa25.9■■□□□ 1.74
PTCH1-210ENST00000468211 RASSF3Q86WH2 238 aa25.9■■□□□ 1.74
PTCH1-210ENST00000468211 C12orf50Q8NA57 414 aaPredicted RBP25.9■■□□□ 1.74
PTCH1-210ENST00000468211 IL17RCQ8NAC3 791 aa25.9■■□□□ 1.74
PTCH1-210ENST00000468211 TCEAL3Q969E4 200 aa25.9■■□□□ 1.74
PTCH1-210ENST00000468211 OSER1Q9NX31 292 aa25.9■■□□□ 1.74
PTCH1-210ENST00000468211 PCDHGA5Q9Y5G8 931 aa25.9■■□□□ 1.74
PTCH1-210ENST00000468211 TPRP12270 2363 aaKnown RBP25.9■■□□□ 1.74
PTCH1-210ENST00000468211 A0A0A0MRY4 1105 aa25.89■■□□□ 1.74
PTCH1-210ENST00000468211 HHLA1C9JL84 531 aa25.89■■□□□ 1.74
PTCH1-210ENST00000468211 TBX18O95935 607 aa25.89■■□□□ 1.74
PTCH1-210ENST00000468211 IRF1P10914 325 aa25.89■■□□□ 1.74
PTCH1-210ENST00000468211 TIE1P35590 1138 aa25.89■■□□□ 1.74
PTCH1-210ENST00000468211 EIF2DP41214 584 aaKnown RBP25.89■■□□□ 1.74
PTCH1-210ENST00000468211 MRPS21P82921 87 aaKnown RBP25.89■■□□□ 1.74
PTCH1-210ENST00000468211 CRY1Q16526 586 aa25.89■■□□□ 1.74
PTCH1-210ENST00000468211 CLEC20AQ6ZU45 233 aa25.89■■□□□ 1.74
PTCH1-210ENST00000468211 NAT16Q8N8M0 369 aa25.89■■□□□ 1.74
PTCH1-210ENST00000468211 CCDC26Q8TAB7 109 aa25.89■■□□□ 1.74
PTCH1-210ENST00000468211 WHAMMQ8TF30 809 aa25.89■■□□□ 1.74
PTCH1-210ENST00000468211 JAKMIP2Q96AA8 810 aa25.89■■□□□ 1.74
PTCH1-210ENST00000468211 MMRN2Q9H8L6 949 aa25.89■■□□□ 1.74
PTCH1-210ENST00000468211 GDPD2Q9HCC8 539 aa25.89■■□□□ 1.74
PTCH1-210ENST00000468211 ARHGEF4Q9NR80 690 aa25.89■■□□□ 1.74
PTCH1-210ENST00000468211 SH3BP1Q9Y3L3 701 aa25.89■■□□□ 1.74
PTCH1-210ENST00000468211 A0A1W2PQ27 194 aa25.88■■□□□ 1.73
PTCH1-210ENST00000468211 A0A1W2PQ64 194 aa25.88■■□□□ 1.73
PTCH1-210ENST00000468211 A0A1W2PQD8 194 aa25.88■■□□□ 1.73
PTCH1-210ENST00000468211 SGK1O00141 431 aa25.88■■□□□ 1.73
PTCH1-210ENST00000468211 GREM1O60565 184 aa25.88■■□□□ 1.73
PTCH1-210ENST00000468211 TLR5O60602 858 aa25.88■■□□□ 1.73
PTCH1-210ENST00000468211 KLF8O95600 359 aaPredicted RBP25.88■■□□□ 1.73
PTCH1-210ENST00000468211 APODP05090 189 aa25.88■■□□□ 1.73
PTCH1-210ENST00000468211 KIR2DL1P43626 348 aaPredicted RBP25.88■■□□□ 1.73
PTCH1-210ENST00000468211 ZCWPW2Q504Y3 356 aa25.88■■□□□ 1.73
PTCH1-210ENST00000468211 INTS8Q75QN2 995 aaKnown RBP25.88■■□□□ 1.73
PTCH1-210ENST00000468211 ETFBKMTQ8IXQ9 262 aa25.88■■□□□ 1.73
PTCH1-210ENST00000468211 FAM186BQ8IYM0 893 aa25.88■■□□□ 1.73
PTCH1-210ENST00000468211 GUF1Q8N442 669 aaKnown RBP25.88■■□□□ 1.73
PTCH1-210ENST00000468211 TXNDC5Q8NBS9 432 aaKnown RBP25.88■■□□□ 1.73
PTCH1-210ENST00000468211 MDGA1Q8NFP4 955 aa25.88■■□□□ 1.73
PTCH1-210ENST00000468211 HNRNPABQ99729 332 aaKnown RBP25.88■■□□□ 1.73
PTCH1-210ENST00000468211 TM4SF5O14894 197 aa25.87■■□□□ 1.73
PTCH1-210ENST00000468211 CYP26A1O43174 497 aa25.87■■□□□ 1.73
PTCH1-210ENST00000468211 ZNF202O95125 648 aa25.87■■□□□ 1.73
PTCH1-210ENST00000468211 KIF20AO95235 890 aa25.87■■□□□ 1.73
PTCH1-210ENST00000468211 FAM200BP0CF97 657 aa25.87■■□□□ 1.73
PTCH1-210ENST00000468211 BCKDHBP21953 392 aa25.87■■□□□ 1.73
PTCH1-210ENST00000468211 GBP1P32455 592 aa25.87■■□□□ 1.73
PTCH1-210ENST00000468211 LIMK1P53667 647 aa25.87■■□□□ 1.73
PTCH1-210ENST00000468211 ELF2Q15723 593 aa25.87■■□□□ 1.73
PTCH1-210ENST00000468211 TTC30AQ86WT1 665 aa25.87■■□□□ 1.73
PTCH1-210ENST00000468211 TMEM25Q86YD3 366 aa25.87■■□□□ 1.73
PTCH1-210ENST00000468211 SMYD4Q8IYR2 804 aaPredicted RBP25.87■■□□□ 1.73
PTCH1-210ENST00000468211 CCDC47Q96A33 483 aaKnown RBP25.87■■□□□ 1.73
PTCH1-210ENST00000468211 OTUB2Q96DC9 234 aa25.87■■□□□ 1.73
PTCH1-210ENST00000468211 CYFIP2Q96F07 1278 aa25.87■■□□□ 1.73
PTCH1-210ENST00000468211 EEF2KMTQ96G04 330 aa25.87■■□□□ 1.73
PTCH1-210ENST00000468211 CNOT6LQ96LI5 555 aaKnown RBP25.87■■□□□ 1.73
PTCH1-210ENST00000468211 NMUR1Q9HB89 426 aa25.87■■□□□ 1.73
PTCH1-210ENST00000468211 TNRC6BQ9UPQ9 1833 aaKnown RBP25.86■■□□□ 1.73
PTCH1-210ENST00000468211 TRIM24O15164 1050 aa25.86■■□□□ 1.73
PTCH1-210ENST00000468211 ADAM23O75077 832 aa25.86■■□□□ 1.73
PTCH1-210ENST00000468211 CILPO75339 1184 aa25.86■■□□□ 1.73
PTCH1-210ENST00000468211 RHOBTB1O94844 696 aa25.86■■□□□ 1.73
PTCH1-210ENST00000468211 ADRB1P08588 477 aa25.86■■□□□ 1.73
PTCH1-210ENST00000468211 CD58P19256 250 aa25.86■■□□□ 1.73
PTCH1-210ENST00000468211 GRIA2P42262 883 aa25.86■■□□□ 1.73
PTCH1-210ENST00000468211 CREB5Q02930 508 aa25.86■■□□□ 1.73
PTCH1-210ENST00000468211 GAD2Q05329 585 aa25.86■■□□□ 1.73
PTCH1-210ENST00000468211 ADAM9Q13443 819 aa25.86■■□□□ 1.73
PTCH1-210ENST00000468211 CNTNAP3BQ96NU0 1288 aa25.86■■□□□ 1.73
PTCH1-210ENST00000468211 NT5C1AQ9BXI3 368 aa25.86■■□□□ 1.73
PTCH1-210ENST00000468211 KLF16Q9BXK1 252 aaPredicted RBP25.86■■□□□ 1.73
PTCH1-210ENST00000468211 CNTNAP3Q9BZ76 1288 aa25.86■■□□□ 1.73
PTCH1-210ENST00000468211 NIF3L1Q9GZT8 377 aa25.86■■□□□ 1.73
PTCH1-210ENST00000468211 SCAND2PQ9GZW5 306 aaPredicted RBP25.86■■□□□ 1.73
PTCH1-210ENST00000468211 NACA2Q9H009 215 aa25.86■■□□□ 1.73
PTCH1-210ENST00000468211 FBXO44Q9H4M3 255 aa25.86■■□□□ 1.73
PTCH1-210ENST00000468211 CYP3A43Q9HB55 503 aa25.86■■□□□ 1.73
PTCH1-210ENST00000468211 TLR8Q9NR97 1041 aaKnown RBP25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms