RNA–Protein interactions for RNA: ENST00000467134.5

MUC1-216, Transcript of mucin 1, cell surface associated, human

TSL 1 (best)

Gene MUC1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-216	ENST00000467134	CPNE8	Q86YQ8	564 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	ZNF276	Q8N554	614 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	BAD	Q92934	168 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	NTAN1	Q96AB6	310 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	SLITRK1	Q96PX8	696 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	TMEM209	Q96SK2	561 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	YME1L1	Q96TA2	773 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	VN1R3	Q9BXE9	311 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	OSBPL8	Q9BZF1	889 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	ULBP1	Q9BZM6	244 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	LRRC19	Q9H756	370 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	EHD2	Q9NZN4	543 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	FNIP2	Q9P278	1114 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	RCOR3	Q9P2K3	495 aa	Predicted RBP	11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	HCST	Q9UBK5	93 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	USP18	Q9UMW8	372 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	SCML2	Q9UQR0	700 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	LZTS1	Q9Y250	596 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	UST	Q9Y2C2	406 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	RWDD3	Q9Y3V2	267 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	INSL6	Q9Y581	213 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	PCDHB12	Q9Y5F1	795 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	CEP350	Q5VT06	3117 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	PLXNA4	Q9HCM2	1894 aa		11.51	□□□□□ -0.57
MUC1-216	ENST00000467134	FAM170A	A1A519	330 aa		11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	MTMR11	A4FU01	709 aa		11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	CCDC151	A5D8V7	595 aa		11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	FAM187A	A6NFU0	413 aa		11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	BHMG1	C9JSJ3	638 aa	Predicted RBP	11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	TJP3	O95049	919 aa		11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	LINC00271	P0C7V0	271 aa		11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	CPB1	P15086	417 aa		11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	H2AFX	P16104	143 aa	Predicted RBP	11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	CDKN2B	P42772	138 aa		11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	PSEN1	P49768	467 aa		11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	ARSE	P51690	589 aa		11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	C2orf54	Q08AI8	447 aa		11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	SCAP	Q12770	1279 aa		11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	ZNF211	Q13398	564 aa	Predicted RBP	11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	BRD3	Q15059	726 aa		11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	ELF2	Q15723	593 aa		11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	PTPRO	Q16827	1216 aa		11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	ODF2	Q5BJF6	829 aa		11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	C8orf74	Q6P047	294 aa		11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	MSANTD2	Q6P1R3	559 aa		11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	SPOCD1	Q6ZMY3	1216 aa		11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	GPRIN1	Q7Z2K8	1008 aa		11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	MAP7D3	Q8IWC1	876 aa		11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	DEFB106A	Q8N104	65 aa		11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	NUP93	Q8N1F7	819 aa		11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	TTC13	Q8NBP0	860 aa		11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	CCDC26	Q8TAB7	109 aa		11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	FAM172A	Q8WUF8	416 aa		11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	KCNK16	Q96T55	309 aa		11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	RAD9A	Q99638	391 aa		11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	ANKZF1	Q9H8Y5	726 aa		11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	RXFP1	Q9HBX9	757 aa		11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	AFF4	Q9UHB7	1163 aa	Known RBP	11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	PCYOX1	Q9UHG3	505 aa		11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	FEZ2	Q9UHY8	353 aa	Predicted RBP	11.5	□□□□□ -0.57
MUC1-216	ENST00000467134	hCG_1818297	A0A087WSY0	165 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	C3orf70	A6NLC5	250 aa	Predicted RBP	11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	ABLIM3	O94929	683 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	IGLV3-25	P01717	112 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	UROD	P06132	367 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	FYN	P06241	537 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	ACR	P10323	421 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	CYP2F1	P24903	491 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	IL1R2	P27930	398 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	GBP1	P32455	592 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	RDX	P35241	583 aa	Known RBP	11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	GRIK1	P39086	918 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	SSR1	P43307	286 aa	Known RBP	11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	TUFM	P49411	452 aa	Known RBP	11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	SLC5A3	P53794	718 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	HDAC4	P56524	1084 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	MTA1	Q13330	715 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	RAB33A	Q14088	237 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	SMC1A	Q14683	1233 aa	Known RBP	11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	TAF5	Q15542	800 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	DPYSL2	Q16555	572 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	CCNG2	Q16589	344 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	SPOUT1	Q5T280	376 aa	Known RBP	11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	KIAA1841	Q6NSI8	718 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	SYDE1	Q6ZW31	735 aa	Predicted RBP	11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	BBS12	Q6ZW61	710 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	MON1A	Q86VX9	555 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	CEP57	Q86XR8	500 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	HERC6	Q8IVU3	1022 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	C7orf61	Q8IZ16	206 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	FIBCD1	Q8N539	461 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	PRELID2	Q8N945	189 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	FBXO22	Q8NEZ5	403 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	CLEC4C	Q8WTT0	213 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	HNRNPLL	Q8WVV9	542 aa	Known RBP	11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	RIN2	Q8WYP3	895 aa	Predicted RBP	11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	OVCA2	Q8WZ82	227 aa		11.49	□□□□□ -0.57
MUC1-216	ENST00000467134	SEC14L1	Q92503	715 aa		11.49	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms