RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 CFHR3Q02985 330 aa2.77□□□□□ -1.97
CCDC93-205ENST00000466171 MTX1Q13505 466 aa2.77□□□□□ -1.97
CCDC93-205ENST00000466171 RAB32Q13637 225 aa2.77□□□□□ -1.97
CCDC93-205ENST00000466171 PTPROQ16827 1216 aa2.77□□□□□ -1.97
CCDC93-205ENST00000466171 INSCQ1MX18 579 aa2.77□□□□□ -1.97
CCDC93-205ENST00000466171 FAM110CQ1W6H9 321 aa2.77□□□□□ -1.97
CCDC93-205ENST00000466171 KRTAP27-1Q3LI81 207 aa2.77□□□□□ -1.97
CCDC93-205ENST00000466171 AWAT1Q58HT5 328 aa2.77□□□□□ -1.97
CCDC93-205ENST00000466171 MANEAQ5SRI9 462 aa2.77□□□□□ -1.97
CCDC93-205ENST00000466171 DCAF12L1Q5VU92 463 aa2.77□□□□□ -1.97
CCDC93-205ENST00000466171 ZNF793Q6ZN11 406 aa2.77□□□□□ -1.97
CCDC93-205ENST00000466171 MPP5Q8N3R9 675 aa2.77□□□□□ -1.97
CCDC93-205ENST00000466171 LINC01465Q8N7H1 131 aa2.77□□□□□ -1.97
CCDC93-205ENST00000466171 OR6B3Q8NGW1 331 aa2.77□□□□□ -1.97
CCDC93-205ENST00000466171 GPATCH3Q96I76 525 aa2.77□□□□□ -1.97
CCDC93-205ENST00000466171 VN1R3Q9BXE9 311 aa2.77□□□□□ -1.97
CCDC93-205ENST00000466171 GTPBP4Q9BZE4 634 aaKnown RBP2.77□□□□□ -1.97
CCDC93-205ENST00000466171 SLCO5A1Q9H2Y9 848 aa2.77□□□□□ -1.97
CCDC93-205ENST00000466171 TRIM36Q9NQ86 728 aa2.77□□□□□ -1.97
CCDC93-205ENST00000466171 GAR1Q9NY12 217 aaKnown RBP2.77□□□□□ -1.97
CCDC93-205ENST00000466171 TCF20Q9UGU0 1960 aaKnown RBP2.77□□□□□ -1.97
CCDC93-205ENST00000466171 hCG_2014768A0A024R1R8 64 aa2.76□□□□□ -1.97
CCDC93-205ENST00000466171 GTPBP1O00178 669 aaKnown RBP2.76□□□□□ -1.97
CCDC93-205ENST00000466171 CLIC1O00299 241 aa2.76□□□□□ -1.97
CCDC93-205ENST00000466171 RGS10O43665 173 aa2.76□□□□□ -1.97
CCDC93-205ENST00000466171 CD19P15391 556 aa2.76□□□□□ -1.97
CCDC93-205ENST00000466171 CDKN1CP49918 316 aaPredicted RBP2.76□□□□□ -1.97
CCDC93-205ENST00000466171 ANAPC15P60006 121 aa2.76□□□□□ -1.97
CCDC93-205ENST00000466171 IGBP1P78318 339 aa2.76□□□□□ -1.97
CCDC93-205ENST00000466171 MFSD13AQ14CX5 517 aa2.76□□□□□ -1.97
CCDC93-205ENST00000466171 ZNF585BQ52M93 769 aa2.76□□□□□ -1.97
CCDC93-205ENST00000466171 SKAP1Q86WV1 359 aa2.76□□□□□ -1.97
CCDC93-205ENST00000466171 DCP1BQ8IZD4 617 aaKnown RBP2.76□□□□□ -1.97
CCDC93-205ENST00000466171 CELF5Q8N6W0 485 aaKnown RBP2.76□□□□□ -1.97
CCDC93-205ENST00000466171 KBTBD7Q8WVZ9 684 aa2.76□□□□□ -1.97
CCDC93-205ENST00000466171 RAPGEF4Q8WZA2 1011 aa2.76□□□□□ -1.97
CCDC93-205ENST00000466171 C1GALT1C1Q96EU7 318 aa2.76□□□□□ -1.97
CCDC93-205ENST00000466171 HIC2Q96JB3 615 aa2.76□□□□□ -1.97
CCDC93-205ENST00000466171 MRGPRX1Q96LB2 322 aa2.76□□□□□ -1.97
CCDC93-205ENST00000466171 PPP1R9BQ96SB3 815 aa2.76□□□□□ -1.97
CCDC93-205ENST00000466171 P2RX7Q99572 595 aaKnown RBP2.76□□□□□ -1.97
CCDC93-205ENST00000466171 CGRRF1Q99675 332 aa2.76□□□□□ -1.97
CCDC93-205ENST00000466171 MRPL44Q9H9J2 332 aaKnown RBP2.76□□□□□ -1.97
CCDC93-205ENST00000466171 SEMA4BQ9NPR2 832 aaPredicted RBP2.76□□□□□ -1.97
CCDC93-205ENST00000466171 DECR2Q9NUI1 292 aa2.76□□□□□ -1.97
CCDC93-205ENST00000466171 LPAR3Q9UBY5 353 aa2.76□□□□□ -1.97
CCDC93-205ENST00000466171 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.76□□□□□ -1.97
CCDC93-205ENST00000466171 COL4A3BPQ9Y5P4 624 aa2.76□□□□□ -1.97
CCDC93-205ENST00000466171 A0A1W2PPL8 197 aa2.75□□□□□ -1.97
CCDC93-205ENST00000466171 C4orf47A7E2U8 309 aa2.75□□□□□ -1.97
CCDC93-205ENST00000466171 BTN3A1O00481 513 aa2.75□□□□□ -1.97
CCDC93-205ENST00000466171 INPPL1O15357 1258 aa2.75□□□□□ -1.97
CCDC93-205ENST00000466171 SRGAP2O75044 1071 aa2.75□□□□□ -1.97
CCDC93-205ENST00000466171 ZC3H11AO75152 810 aaKnown RBP eCLIP2.75□□□□□ -1.97
CCDC93-205ENST00000466171 RASAL1O95294 804 aa2.75□□□□□ -1.97
CCDC93-205ENST00000466171 ALDH7A1P49419 539 aaKnown RBP2.75□□□□□ -1.97
CCDC93-205ENST00000466171 RAB1AP62820 205 aa2.75□□□□□ -1.97
CCDC93-205ENST00000466171 ZXDBP98169 803 aa2.75□□□□□ -1.97
CCDC93-205ENST00000466171 B4GALNT1Q00973 533 aa2.75□□□□□ -1.97
CCDC93-205ENST00000466171 SLC13A2Q13183 592 aa2.75□□□□□ -1.97
CCDC93-205ENST00000466171 CTBP1Q13363 440 aa2.75□□□□□ -1.97
CCDC93-205ENST00000466171 SEC23BQ15437 767 aa2.75□□□□□ -1.97
CCDC93-205ENST00000466171 ASIC2Q16515 512 aa2.75□□□□□ -1.97
CCDC93-205ENST00000466171 PRTGQ2VWP7 1150 aa2.75□□□□□ -1.97
CCDC93-205ENST00000466171 PTCHD3Q3KNS1 767 aa2.75□□□□□ -1.97
CCDC93-205ENST00000466171 ZNF628Q5EBL2 1059 aa2.75□□□□□ -1.97
CCDC93-205ENST00000466171 CACHD1Q5VU97 1274 aa2.75□□□□□ -1.97
CCDC93-205ENST00000466171 B4GALNT4Q76KP1 1039 aa2.75□□□□□ -1.97
CCDC93-205ENST00000466171 ZBTB46Q86UZ6 589 aa2.75□□□□□ -1.97
CCDC93-205ENST00000466171 GRAMD1CQ8IYS0 662 aa2.75□□□□□ -1.97
CCDC93-205ENST00000466171 ANKRD13AQ8IZ07 590 aa2.75□□□□□ -1.97
CCDC93-205ENST00000466171 RBMXL3Q8N7X1 1067 aaKnown RBP2.75□□□□□ -1.97
CCDC93-205ENST00000466171 C12orf76Q8N812 135 aaPredicted RBP2.75□□□□□ -1.97
CCDC93-205ENST00000466171 PRPF38AQ8NAV1 312 aaKnown RBP2.75□□□□□ -1.97
CCDC93-205ENST00000466171 ZCRB1Q8TBF4 217 aaKnown RBP2.75□□□□□ -1.97
CCDC93-205ENST00000466171 DNAJB14Q8TBM8 379 aa2.75□□□□□ -1.97
CCDC93-205ENST00000466171 SMCR8Q8TEV9 937 aaPredicted RBP2.75□□□□□ -1.97
CCDC93-205ENST00000466171 SLC25A28Q96A46 364 aa2.75□□□□□ -1.97
CCDC93-205ENST00000466171 CTHRC1Q96CG8 243 aa2.75□□□□□ -1.97
CCDC93-205ENST00000466171 VPS50Q96JG6 964 aa2.75□□□□□ -1.97
CCDC93-205ENST00000466171 NUP88Q99567 741 aaPredicted RBP2.75□□□□□ -1.97
CCDC93-205ENST00000466171 MEIS3Q99687 375 aa2.75□□□□□ -1.97
CCDC93-205ENST00000466171 PCDH12Q9NPG4 1184 aa2.75□□□□□ -1.97
CCDC93-205ENST00000466171 ARL8BQ9NVJ2 186 aa2.75□□□□□ -1.97
CCDC93-205ENST00000466171 SELENONQ9NZV5 590 aa2.75□□□□□ -1.97
CCDC93-205ENST00000466171 NKX1-2Q9UD57 310 aaPredicted RBP2.75□□□□□ -1.97
CCDC93-205ENST00000466171 LUC7L2Q9Y383 392 aaKnown RBP2.75□□□□□ -1.97
CCDC93-205ENST00000466171 FER1L4A9Z1Z3 1794 aa2.74□□□□□ -1.97
CCDC93-205ENST00000466171 WASHC2CQ9Y4E1 1318 aa2.74□□□□□ -1.97
CCDC93-205ENST00000466171 A0A088AWK7 358 aa2.74□□□□□ -1.97
CCDC93-205ENST00000466171 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.74□□□□□ -1.97
CCDC93-205ENST00000466171 AP1G1O43747 822 aa2.74□□□□□ -1.97
CCDC93-205ENST00000466171 OFD1O75665 1012 aa2.74□□□□□ -1.97
CCDC93-205ENST00000466171 ALDH2P05091 517 aa2.74□□□□□ -1.97
CCDC93-205ENST00000466171 HMGB1P09429 215 aaKnown RBP2.74□□□□□ -1.97
CCDC93-205ENST00000466171 UQCRC1P31930 480 aa2.74□□□□□ -1.97
CCDC93-205ENST00000466171 PGGT1BP53609 377 aa2.74□□□□□ -1.97
CCDC93-205ENST00000466171 SLC12A2P55011 1212 aa2.74□□□□□ -1.97
CCDC93-205ENST00000466171 EVA1CP58658 441 aa2.74□□□□□ -1.97
CCDC93-205ENST00000466171 TIRAPP58753 221 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms