RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 CCDC47Q96A33 483 aaKnown RBP22.08■■□□□ 1.13
CSPG5-204ENST00000465441 FAM49BQ9NUQ9 324 aa22.08■■□□□ 1.13
CSPG5-204ENST00000465441 TM4SF5O14894 197 aa22.07■■□□□ 1.12
CSPG5-204ENST00000465441 ADRB1P08588 477 aa22.07■■□□□ 1.12
CSPG5-204ENST00000465441 HNRNPLP14866 589 aaKnown RBP eCLIP22.07■■□□□ 1.12
CSPG5-204ENST00000465441 NR2F2P24468 414 aa22.07■■□□□ 1.12
CSPG5-204ENST00000465441 PIK3CAP42336 1068 aa22.07■■□□□ 1.12
CSPG5-204ENST00000465441 TUBP50607 506 aa22.07■■□□□ 1.12
CSPG5-204ENST00000465441 ELF2Q15723 593 aa22.07■■□□□ 1.12
CSPG5-204ENST00000465441 NFIL3Q16649 462 aa22.07■■□□□ 1.12
CSPG5-204ENST00000465441 IL31Q6EBC2 164 aa22.07■■□□□ 1.12
CSPG5-204ENST00000465441 ANO7Q6IWH7 933 aa22.07■■□□□ 1.12
CSPG5-204ENST00000465441 ALLCQ8N6M5 410 aa22.07■■□□□ 1.12
CSPG5-204ENST00000465441 NAT16Q8N8M0 369 aa22.07■■□□□ 1.12
CSPG5-204ENST00000465441 TXNDC5Q8NBS9 432 aaKnown RBP22.07■■□□□ 1.12
CSPG5-204ENST00000465441 OTUB2Q96DC9 234 aa22.07■■□□□ 1.12
CSPG5-204ENST00000465441 TWNKQ96RR1 684 aa22.07■■□□□ 1.12
CSPG5-204ENST00000465441 FBXO44Q9H4M3 255 aa22.07■■□□□ 1.12
CSPG5-204ENST00000465441 APOBEC3GQ9HC16 384 aaKnown RBP22.07■■□□□ 1.12
CSPG5-204ENST00000465441 ARHGEF4Q9NR80 690 aa22.07■■□□□ 1.12
CSPG5-204ENST00000465441 VPS45Q9NRW7 570 aa22.07■■□□□ 1.12
CSPG5-204ENST00000465441 KIAA1549LQ6ZVL6 1849 aa22.07■■□□□ 1.12
CSPG5-204ENST00000465441 TBX18O95935 607 aa22.06■■□□□ 1.12
CSPG5-204ENST00000465441 CHRM1P11229 460 aaPredicted RBP22.06■■□□□ 1.12
CSPG5-204ENST00000465441 ADORA2BP29275 332 aa22.06■■□□□ 1.12
CSPG5-204ENST00000465441 GBP1P32455 592 aa22.06■■□□□ 1.12
CSPG5-204ENST00000465441 GRIA2P42262 883 aa22.06■■□□□ 1.12
CSPG5-204ENST00000465441 TNFRSF4P43489 277 aa22.06■■□□□ 1.12
CSPG5-204ENST00000465441 GCLMP48507 274 aa22.06■■□□□ 1.12
CSPG5-204ENST00000465441 PPP3CAQ08209 521 aa22.06■■□□□ 1.12
CSPG5-204ENST00000465441 KRBA2Q6ZNG9 492 aa22.06■■□□□ 1.12
CSPG5-204ENST00000465441 BBS7Q8IWZ6 715 aa22.06■■□□□ 1.12
CSPG5-204ENST00000465441 IL17RCQ8NAC3 791 aa22.06■■□□□ 1.12
CSPG5-204ENST00000465441 CYFIP2Q96F07 1278 aa22.06■■□□□ 1.12
CSPG5-204ENST00000465441 CNOT6LQ96LI5 555 aaKnown RBP22.06■■□□□ 1.12
CSPG5-204ENST00000465441 CNTNAP3BQ96NU0 1288 aa22.06■■□□□ 1.12
CSPG5-204ENST00000465441 HNRNPABQ99729 332 aaKnown RBP22.06■■□□□ 1.12
CSPG5-204ENST00000465441 CNTNAP3Q9BZ76 1288 aa22.06■■□□□ 1.12
CSPG5-204ENST00000465441 BCLAF3A2AJT9 711 aaKnown RBP22.05■■□□□ 1.12
CSPG5-204ENST00000465441 SGK1O00141 431 aa22.05■■□□□ 1.12
CSPG5-204ENST00000465441 TLR5O60602 858 aa22.05■■□□□ 1.12
CSPG5-204ENST00000465441 KLF8O95600 359 aaPredicted RBP22.05■■□□□ 1.12
CSPG5-204ENST00000465441 FAM200BP0CF97 657 aa22.05■■□□□ 1.12
CSPG5-204ENST00000465441 TRIM49P0CI25 452 aa22.05■■□□□ 1.12
CSPG5-204ENST00000465441 TRIM49CP0CI26 452 aa22.05■■□□□ 1.12
CSPG5-204ENST00000465441 IRF1P10914 325 aa22.05■■□□□ 1.12
CSPG5-204ENST00000465441 KIR2DL1P43626 348 aaPredicted RBP22.05■■□□□ 1.12
CSPG5-204ENST00000465441 CREB5Q02930 508 aa22.05■■□□□ 1.12
CSPG5-204ENST00000465441 KDSRQ06136 332 aa22.05■■□□□ 1.12
CSPG5-204ENST00000465441 ADAM9Q13443 819 aa22.05■■□□□ 1.12
CSPG5-204ENST00000465441 STPG1Q5TH74 334 aa22.05■■□□□ 1.12
CSPG5-204ENST00000465441 INTS8Q75QN2 995 aaKnown RBP22.05■■□□□ 1.12
CSPG5-204ENST00000465441 TTC30AQ86WT1 665 aa22.05■■□□□ 1.12
CSPG5-204ENST00000465441 TMEM25Q86YD3 366 aa22.05■■□□□ 1.12
CSPG5-204ENST00000465441 ABCA7Q8IZY2 2146 aa22.05■■□□□ 1.12
CSPG5-204ENST00000465441 PHTF2Q8N3S3 785 aa22.05■■□□□ 1.12
CSPG5-204ENST00000465441 MDGA1Q8NFP4 955 aa22.05■■□□□ 1.12
CSPG5-204ENST00000465441 TAS1R2Q8TE23 839 aa22.05■■□□□ 1.12
CSPG5-204ENST00000465441 DUSP9Q99956 384 aaKnown RBP22.05■■□□□ 1.12
CSPG5-204ENST00000465441 NACA2Q9H009 215 aa22.05■■□□□ 1.12
CSPG5-204ENST00000465441 ZDHHC4Q9NPG8 344 aa22.05■■□□□ 1.12
CSPG5-204ENST00000465441 TLR8Q9NR97 1041 aaKnown RBP22.05■■□□□ 1.12
CSPG5-204ENST00000465441 A0A1W2PQ27 194 aa22.04■■□□□ 1.12
CSPG5-204ENST00000465441 A0A1W2PQ64 194 aa22.04■■□□□ 1.12
CSPG5-204ENST00000465441 A0A1W2PQD8 194 aa22.04■■□□□ 1.12
CSPG5-204ENST00000465441 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.04■■□□□ 1.12
CSPG5-204ENST00000465441 HHLA1C9JL84 531 aa22.04■■□□□ 1.12
CSPG5-204ENST00000465441 CAVIN2O95810 425 aa22.04■■□□□ 1.12
CSPG5-204ENST00000465441 PSMC2P35998 433 aaKnown RBP22.04■■□□□ 1.12
CSPG5-204ENST00000465441 INCA1Q0VD86 236 aa22.04■■□□□ 1.12
CSPG5-204ENST00000465441 HSF5Q4G112 596 aaPredicted RBP22.04■■□□□ 1.12
CSPG5-204ENST00000465441 TCEAL6Q6IPX3 200 aa22.04■■□□□ 1.12
CSPG5-204ENST00000465441 CLEC20AQ6ZU45 233 aa22.04■■□□□ 1.12
CSPG5-204ENST00000465441 GPRIN1Q7Z2K8 1008 aa22.04■■□□□ 1.12
CSPG5-204ENST00000465441 ETFBKMTQ8IXQ9 262 aa22.04■■□□□ 1.12
CSPG5-204ENST00000465441 FAM186BQ8IYM0 893 aa22.04■■□□□ 1.12
CSPG5-204ENST00000465441 GUF1Q8N442 669 aaKnown RBP22.04■■□□□ 1.12
CSPG5-204ENST00000465441 WHAMMQ8TF30 809 aa22.04■■□□□ 1.12
CSPG5-204ENST00000465441 DDX1Q92499 740 aaKnown RBP22.04■■□□□ 1.12
CSPG5-204ENST00000465441 TCEAL3Q969E4 200 aa22.04■■□□□ 1.12
CSPG5-204ENST00000465441 NT5C1AQ9BXI3 368 aa22.04■■□□□ 1.12
CSPG5-204ENST00000465441 KLF16Q9BXK1 252 aaPredicted RBP22.04■■□□□ 1.12
CSPG5-204ENST00000465441 GOLPH3LQ9H4A5 285 aa22.04■■□□□ 1.12
CSPG5-204ENST00000465441 MMRN2Q9H8L6 949 aa22.04■■□□□ 1.12
CSPG5-204ENST00000465441 CYP3A43Q9HB55 503 aa22.04■■□□□ 1.12
CSPG5-204ENST00000465441 SPHK2Q9NRA0 654 aa22.04■■□□□ 1.12
CSPG5-204ENST00000465441 OSER1Q9NX31 292 aa22.04■■□□□ 1.12
CSPG5-204ENST00000465441 MYH10P35580 1976 aa22.03■■□□□ 1.12
CSPG5-204ENST00000465441 NCOR2Q9Y618 2525 aa22.03■■□□□ 1.12
CSPG5-204ENST00000465441 TBC1D3BA6NDS4 549 aa22.03■■□□□ 1.12
CSPG5-204ENST00000465441 HOXC11O43248 304 aaPredicted RBP22.03■■□□□ 1.12
CSPG5-204ENST00000465441 TULP3O75386 442 aa22.03■■□□□ 1.12
CSPG5-204ENST00000465441 ALDH1A2O94788 518 aa22.03■■□□□ 1.12
CSPG5-204ENST00000465441 ZNF202O95125 648 aa22.03■■□□□ 1.12
CSPG5-204ENST00000465441 KRT13P13646 458 aa22.03■■□□□ 1.12
CSPG5-204ENST00000465441 BCKDHBP21953 392 aa22.03■■□□□ 1.12
CSPG5-204ENST00000465441 RPL13P26373 211 aaKnown RBP22.03■■□□□ 1.12
CSPG5-204ENST00000465441 ANO4Q32M45 955 aa22.03■■□□□ 1.12
CSPG5-204ENST00000465441 EOGTQ5NDL2 527 aa22.03■■□□□ 1.12
CSPG5-204ENST00000465441 BTBD8Q5XKL5 378 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms