RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 TLR8Q9NR97 1041 aaKnown RBP21.72■■□□□ 1.07
PDLIM4-205ENST00000463615 COQ4Q9Y3A0 265 aa21.72■■□□□ 1.07
PDLIM4-205ENST00000463615 PCDHA5Q9Y5H7 936 aa21.72■■□□□ 1.07
PDLIM4-205ENST00000463615 ATG2BQ96BY7 2078 aa21.71■■□□□ 1.07
PDLIM4-205ENST00000463615 GOLGA6L4A6NEF3 574 aa21.71■■□□□ 1.07
PDLIM4-205ENST00000463615 EPB41P11171 864 aaKnown RBP21.71■■□□□ 1.07
PDLIM4-205ENST00000463615 CHRM1P11229 460 aaPredicted RBP21.71■■□□□ 1.07
PDLIM4-205ENST00000463615 MXI1P50539 228 aa21.71■■□□□ 1.07
PDLIM4-205ENST00000463615 DMC1Q14565 340 aa21.71■■□□□ 1.07
PDLIM4-205ENST00000463615 CSRP2Q16527 193 aa21.71■■□□□ 1.07
PDLIM4-205ENST00000463615 KLHDC10Q6PID8 442 aa21.71■■□□□ 1.07
PDLIM4-205ENST00000463615 CEP68Q76N32 757 aa21.71■■□□□ 1.07
PDLIM4-205ENST00000463615 CACNA2D4Q7Z3S7 1137 aa21.71■■□□□ 1.07
PDLIM4-205ENST00000463615 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.71■■□□□ 1.07
PDLIM4-205ENST00000463615 SEMA4DQ92854 862 aa21.71■■□□□ 1.07
PDLIM4-205ENST00000463615 ZC3H10Q96K80 434 aaKnown RBP21.71■■□□□ 1.07
PDLIM4-205ENST00000463615 RAB20Q9NX57 234 aa21.71■■□□□ 1.07
PDLIM4-205ENST00000463615 USP18Q9UMW8 372 aa21.71■■□□□ 1.07
PDLIM4-205ENST00000463615 TLR5O60602 858 aa21.7■■□□□ 1.06
PDLIM4-205ENST00000463615 RPP40O75818 363 aaKnown RBP21.7■■□□□ 1.06
PDLIM4-205ENST00000463615 SMC2O95347 1197 aa21.7■■□□□ 1.06
PDLIM4-205ENST00000463615 APBB3O95704 486 aa21.7■■□□□ 1.06
PDLIM4-205ENST00000463615 PGFP49763 221 aa21.7■■□□□ 1.06
PDLIM4-205ENST00000463615 MRPS21P82921 87 aaKnown RBP21.7■■□□□ 1.06
PDLIM4-205ENST00000463615 FKBP3Q00688 224 aaKnown RBP21.7■■□□□ 1.06
PDLIM4-205ENST00000463615 LRRC63Q05C16 580 aa21.7■■□□□ 1.06
PDLIM4-205ENST00000463615 SPEM2Q0P670 501 aa21.7■■□□□ 1.06
PDLIM4-205ENST00000463615 HSF5Q4G112 596 aaPredicted RBP21.7■■□□□ 1.06
PDLIM4-205ENST00000463615 GPRIN1Q7Z2K8 1008 aa21.7■■□□□ 1.06
PDLIM4-205ENST00000463615 DGLUCYQ7Z3D6 616 aa21.7■■□□□ 1.06
PDLIM4-205ENST00000463615 PNKPQ96T60 521 aa21.7■■□□□ 1.06
PDLIM4-205ENST00000463615 SEMA4GQ9NTN9 838 aa21.7■■□□□ 1.06
PDLIM4-205ENST00000463615 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.69■■□□□ 1.06
PDLIM4-205ENST00000463615 AXIN1O15169 862 aa21.69■■□□□ 1.06
PDLIM4-205ENST00000463615 HOXC11O43248 304 aaPredicted RBP21.69■■□□□ 1.06
PDLIM4-205ENST00000463615 GREM1O60565 184 aa21.69■■□□□ 1.06
PDLIM4-205ENST00000463615 ADH5P11766 374 aa21.69■■□□□ 1.06
PDLIM4-205ENST00000463615 ADORA2BP29275 332 aa21.69■■□□□ 1.06
PDLIM4-205ENST00000463615 PXNP49023 591 aaPredicted RBP21.69■■□□□ 1.06
PDLIM4-205ENST00000463615 KIF11P52732 1056 aa21.69■■□□□ 1.06
PDLIM4-205ENST00000463615 HTR3DQ70Z44 454 aa21.69■■□□□ 1.06
PDLIM4-205ENST00000463615 TSG101Q99816 390 aa21.69■■□□□ 1.06
PDLIM4-205ENST00000463615 KLF16Q9BXK1 252 aaPredicted RBP21.69■■□□□ 1.06
PDLIM4-205ENST00000463615 DUSP16Q9BY84 665 aa21.69■■□□□ 1.06
PDLIM4-205ENST00000463615 UBXN6Q9BZV1 441 aa21.69■■□□□ 1.06
PDLIM4-205ENST00000463615 POLR3BQ9NW08 1133 aaPredicted RBP21.69■■□□□ 1.06
PDLIM4-205ENST00000463615 MMP17Q9ULZ9 603 aa21.69■■□□□ 1.06
PDLIM4-205ENST00000463615 SH3BP1Q9Y3L3 701 aa21.69■■□□□ 1.06
PDLIM4-205ENST00000463615 USP3Q9Y6I4 520 aa21.69■■□□□ 1.06
PDLIM4-205ENST00000463615 SPAG17Q6Q759 2223 aa21.69■■□□□ 1.06
PDLIM4-205ENST00000463615 CD58P19256 250 aa21.68■■□□□ 1.06
PDLIM4-205ENST00000463615 PSEN1P49768 467 aa21.68■■□□□ 1.06
PDLIM4-205ENST00000463615 GAD2Q05329 585 aa21.68■■□□□ 1.06
PDLIM4-205ENST00000463615 LY6G5CQ5SRR4 150 aa21.68■■□□□ 1.06
PDLIM4-205ENST00000463615 CCDC186Q7Z3E2 898 aa21.68■■□□□ 1.06
PDLIM4-205ENST00000463615 RASSF3Q86WH2 238 aa21.68■■□□□ 1.06
PDLIM4-205ENST00000463615 ETFBKMTQ8IXQ9 262 aa21.68■■□□□ 1.06
PDLIM4-205ENST00000463615 PHTF2Q8N3S3 785 aa21.68■■□□□ 1.06
PDLIM4-205ENST00000463615 SMARCE1Q969G3 411 aa21.68■■□□□ 1.06
PDLIM4-205ENST00000463615 EEF2KMTQ96G04 330 aa21.68■■□□□ 1.06
PDLIM4-205ENST00000463615 HHIPQ96QV1 700 aa21.68■■□□□ 1.06
PDLIM4-205ENST00000463615 MMRN2Q9H8L6 949 aa21.68■■□□□ 1.06
PDLIM4-205ENST00000463615 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.68■■□□□ 1.06
PDLIM4-205ENST00000463615 CISHQ9NSE2 258 aa21.68■■□□□ 1.06
PDLIM4-205ENST00000463615 HOOK1Q9UJC3 728 aaKnown RBP21.68■■□□□ 1.06
PDLIM4-205ENST00000463615 MYH10P35580 1976 aa21.67■■□□□ 1.06
PDLIM4-205ENST00000463615 EML5Q05BV3 1969 aa21.67■■□□□ 1.06
PDLIM4-205ENST00000463615 EPN2O95208 641 aa21.67■■□□□ 1.06
PDLIM4-205ENST00000463615 KAT7O95251 611 aa21.67■■□□□ 1.06
PDLIM4-205ENST00000463615 ACO1P21399 889 aaKnown RBP21.67■■□□□ 1.06
PDLIM4-205ENST00000463615 ATP5C1P36542 298 aaKnown RBP21.67■■□□□ 1.06
PDLIM4-205ENST00000463615 GRIA2P42262 883 aa21.67■■□□□ 1.06
PDLIM4-205ENST00000463615 TNFRSF4P43489 277 aa21.67■■□□□ 1.06
PDLIM4-205ENST00000463615 SLC6A11P48066 632 aa21.67■■□□□ 1.06
PDLIM4-205ENST00000463615 PMS1P54277 932 aaKnown RBP21.67■■□□□ 1.06
PDLIM4-205ENST00000463615 PPP1R26Q5T8A7 1209 aaPredicted RBP21.67■■□□□ 1.06
PDLIM4-205ENST00000463615 ARHGAP17Q68EM7 881 aa21.67■■□□□ 1.06
PDLIM4-205ENST00000463615 ANKRD40Q6AI12 368 aa21.67■■□□□ 1.06
PDLIM4-205ENST00000463615 FOXR2Q6PJQ5 311 aa21.67■■□□□ 1.06
PDLIM4-205ENST00000463615 PRR23CQ6ZRP0 262 aa21.67■■□□□ 1.06
PDLIM4-205ENST00000463615 C12orf40Q86WS4 652 aa21.67■■□□□ 1.06
PDLIM4-205ENST00000463615 BBS7Q8IWZ6 715 aa21.67■■□□□ 1.06
PDLIM4-205ENST00000463615 KCNV2Q8TDN2 545 aa21.67■■□□□ 1.06
PDLIM4-205ENST00000463615 RTKNQ9BST9 563 aa21.67■■□□□ 1.06
PDLIM4-205ENST00000463615 SPHK2Q9NRA0 654 aa21.67■■□□□ 1.06
PDLIM4-205ENST00000463615 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.67■■□□□ 1.06
PDLIM4-205ENST00000463615 OSER1Q9NX31 292 aa21.67■■□□□ 1.06
PDLIM4-205ENST00000463615 PCDHGA5Q9Y5G8 931 aa21.67■■□□□ 1.06
PDLIM4-205ENST00000463615 SCAMP3O14828 347 aaKnown RBP21.66■■□□□ 1.06
PDLIM4-205ENST00000463615 APODP05090 189 aa21.66■■□□□ 1.06
PDLIM4-205ENST00000463615 CCDC192P0DO97 292 aa21.66■■□□□ 1.06
PDLIM4-205ENST00000463615 KIR2DL1P43626 348 aaPredicted RBP21.66■■□□□ 1.06
PDLIM4-205ENST00000463615 ATXN1P54253 815 aaKnown RBP21.66■■□□□ 1.06
PDLIM4-205ENST00000463615 RAD23BP54727 409 aa21.66■■□□□ 1.06
PDLIM4-205ENST00000463615 MESP2Q0VG99 397 aa21.66■■□□□ 1.06
PDLIM4-205ENST00000463615 PREPLQ4J6C6 727 aaPredicted RBP21.66■■□□□ 1.06
PDLIM4-205ENST00000463615 CBWD6Q4V339 395 aa21.66■■□□□ 1.06
PDLIM4-205ENST00000463615 CBWD3Q5JTY5 395 aa21.66■■□□□ 1.06
PDLIM4-205ENST00000463615 CBWD5Q5RIA9 395 aa21.66■■□□□ 1.06
PDLIM4-205ENST00000463615 KBTBD6Q86V97 674 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms