RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 PLD5Q8N7P1 536 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 FAM71DQ8N9W8 422 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 PCDH19Q8TAB3 1148 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 SPATA18Q8TC71 538 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 PRCCQ92733 491 aaPredicted RBP10.61□□□□□ -0.71
MSH5-211ENST00000463144 FOXP3Q9BZS1 431 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 CRTAC1Q9NQ79 661 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 TIMM13Q9Y5L4 95 aaPredicted RBP10.61□□□□□ -0.71
MSH5-211ENST00000463144 THSD7BQ9C0I4 1608 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 FOXO6A8MYZ6 492 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 MDM4O15151 490 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 GPR182O15218 404 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 AGTP01019 485 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 IVLP07476 585 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 GHRP10912 638 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 MMP13P45452 471 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 ACADSBP45954 432 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 NDUFV1P49821 464 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 RABGGTBP53611 331 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 KRT81Q14533 505 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 DSC3Q14574 896 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 LPIN1Q14693 890 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 PDK2Q15119 407 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 ANKRD20A8PQ5CZ79 823 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 HP1BP3Q5SSJ5 553 aaPredicted RBP10.61□□□□□ -0.71
MSH5-211ENST00000463144 C1orf228Q6PIY5 440 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 CROCCP2Q86T23 111 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 RSAD2Q8WXG1 361 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 CPT1BQ92523 772 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 MAK16Q9BXY0 300 aaKnown RBP10.61□□□□□ -0.71
MSH5-211ENST00000463144 EPN3Q9H201 632 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 SAYSD1Q9NPB0 183 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 SLC38A7Q9NVC3 462 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 DDX43Q9NXZ2 648 aaKnown RBP10.61□□□□□ -0.71
MSH5-211ENST00000463144 CTNNAL1Q9UBT7 734 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 GIT1Q9Y2X7 761 aa10.61□□□□□ -0.71
MSH5-211ENST00000463144 TCRBV7S3A2A0A539 114 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 CASTOR2A6NHX0 329 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 ZNF623O75123 536 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 TCEA3O75764 348 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 CST5P28325 142 aaPredicted RBP10.6□□□□□ -0.71
MSH5-211ENST00000463144 L1CAMP32004 1257 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 CTCFP49711 727 aaPredicted RBP10.6□□□□□ -0.71
MSH5-211ENST00000463144 SP3Q02447 781 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 TFDP2Q14188 446 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 TRIM71Q2Q1W2 868 aaKnown RBP10.6□□□□□ -0.71
MSH5-211ENST00000463144 CCDC38Q502W7 563 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 MDH1BQ5I0G3 518 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 CLEC20AQ6ZU45 233 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 EXOC3L1Q86VI1 746 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 ZC3H18Q86VM9 953 aaKnown RBP10.6□□□□□ -0.71
MSH5-211ENST00000463144 MAP7D3Q8IWC1 876 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 TAB3Q8N5C8 712 aaPredicted RBP10.6□□□□□ -0.71
MSH5-211ENST00000463144 NAT8LQ8N9F0 302 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 SERPINB12Q96P63 405 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 TBCBQ99426 244 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 TRMT13Q9NUP7 481 aaKnown RBP10.6□□□□□ -0.71
MSH5-211ENST00000463144 MTMR10Q9NXD2 777 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 SHOC2Q9UQ13 582 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 MYBPHLA2RUH7 354 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 MCF2LO15068 1137 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 ALOX15BO15296 676 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 CREB1P16220 341 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 NPR3P17342 541 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 PITX1P78337 314 aaPredicted RBP10.6□□□□□ -0.71
MSH5-211ENST00000463144 ADIGQ0VDE8 80 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 UPP1Q16831 310 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 ERMARDQ5T6L9 678 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 OTUD1Q5VV17 481 aaPredicted RBP10.6□□□□□ -0.71
MSH5-211ENST00000463144 SLC9A4Q6AI14 798 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 DARS2Q6PI48 645 aaKnown RBP10.6□□□□□ -0.71
MSH5-211ENST00000463144 CD300LGQ6UXG3 332 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 HACE1Q8IYU2 909 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 DEFB106AQ8N104 65 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 CYP4X1Q8N118 509 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 CCDC185Q8N715 623 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 P3H4Q92791 437 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 FAF2Q96CS3 445 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 USP29Q9HBJ7 922 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 TMEM30AQ9NV96 361 aa10.6□□□□□ -0.71
MSH5-211ENST00000463144 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.6□□□□□ -0.71
MSH5-211ENST00000463144 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.6□□□□□ -0.71
MSH5-211ENST00000463144 GOLGA8MH3BSY2 632 aa10.59□□□□□ -0.71
MSH5-211ENST00000463144 I3L4J1 428 aa10.59□□□□□ -0.71
MSH5-211ENST00000463144 BANF1O75531 89 aa10.59□□□□□ -0.71
MSH5-211ENST00000463144 MAP3K6O95382 1288 aa10.59□□□□□ -0.71
MSH5-211ENST00000463144 MATKP42679 507 aa10.59□□□□□ -0.71
MSH5-211ENST00000463144 CCT5P48643 541 aa10.59□□□□□ -0.71
MSH5-211ENST00000463144 CACNA2D1P54289 1103 aa10.59□□□□□ -0.71
MSH5-211ENST00000463144 MAP3K7CLP57077 242 aa10.59□□□□□ -0.71
MSH5-211ENST00000463144 MRPS5P82675 430 aaKnown RBP10.59□□□□□ -0.71
MSH5-211ENST00000463144 ROR1Q01973 937 aa10.59□□□□□ -0.71
MSH5-211ENST00000463144 ITGA7Q13683 1181 aa10.59□□□□□ -0.71
MSH5-211ENST00000463144 DPYSL2Q16555 572 aa10.59□□□□□ -0.71
MSH5-211ENST00000463144 MSS51Q4VC12 460 aa10.59□□□□□ -0.71
MSH5-211ENST00000463144 TIGD5Q53EQ6 642 aa10.59□□□□□ -0.71
MSH5-211ENST00000463144 PPP6R3Q5H9R7 873 aaPredicted RBP10.59□□□□□ -0.71
MSH5-211ENST00000463144 EFHC1Q5JVL4 640 aa10.59□□□□□ -0.71
MSH5-211ENST00000463144 FNBP1LQ5T0N5 605 aa10.59□□□□□ -0.71
MSH5-211ENST00000463144 MAP3K21Q5TCX8 1036 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms