RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 GSTCDQ8NEC7 633 aa12.95□□□□□ -0.34
HDAC4-208ENST00000463007 SPATA18Q8TC71 538 aa12.95□□□□□ -0.34
HDAC4-208ENST00000463007 EBF4Q9BQW3 602 aa12.95□□□□□ -0.34
HDAC4-208ENST00000463007 MTMR12Q9C0I1 747 aa12.95□□□□□ -0.34
HDAC4-208ENST00000463007 TCRBV9S1A1TA0A576 114 aa12.95□□□□□ -0.34
HDAC4-208ENST00000463007 I3L4J1 428 aa12.95□□□□□ -0.34
HDAC4-208ENST00000463007 K7ERI5 159 aa12.95□□□□□ -0.34
HDAC4-208ENST00000463007 RAB27AP51159 221 aa12.95□□□□□ -0.34
HDAC4-208ENST00000463007 CCNG1P51959 295 aa12.95□□□□□ -0.34
HDAC4-208ENST00000463007 CDH8P55286 799 aa12.95□□□□□ -0.34
HDAC4-208ENST00000463007 CDK16Q00536 496 aa12.95□□□□□ -0.34
HDAC4-208ENST00000463007 SH3PXD2AQ5TCZ1 1133 aa12.95□□□□□ -0.34
HDAC4-208ENST00000463007 RIPOR1Q6ZS17 1223 aa12.95□□□□□ -0.34
HDAC4-208ENST00000463007 POLNQ7Z5Q5 900 aa12.95□□□□□ -0.34
HDAC4-208ENST00000463007 SMC1BQ8NDV3 1235 aa12.95□□□□□ -0.34
HDAC4-208ENST00000463007 SLC26A7Q8TE54 656 aa12.95□□□□□ -0.34
HDAC4-208ENST00000463007 CNKSR2Q8WXI2 1034 aa12.95□□□□□ -0.34
HDAC4-208ENST00000463007 TUBGCP5Q96RT8 1024 aa12.95□□□□□ -0.34
HDAC4-208ENST00000463007 KCNK13Q9HB14 408 aa12.95□□□□□ -0.34
HDAC4-208ENST00000463007 KRT82Q9NSB4 513 aa12.95□□□□□ -0.34
HDAC4-208ENST00000463007 SENP1Q9P0U3 644 aa12.95□□□□□ -0.34
HDAC4-208ENST00000463007 PPM1HQ9ULR3 514 aa12.95□□□□□ -0.34
HDAC4-208ENST00000463007 SCINQ9Y6U3 715 aa12.95□□□□□ -0.34
HDAC4-208ENST00000463007 IGKV6-21A0A0C4DH24 114 aa12.94□□□□□ -0.34
HDAC4-208ENST00000463007 MAFO75444 373 aaPredicted RBP12.94□□□□□ -0.34
HDAC4-208ENST00000463007 APRTP07741 180 aa12.94□□□□□ -0.34
HDAC4-208ENST00000463007 ABHD2P08910 425 aa12.94□□□□□ -0.34
HDAC4-208ENST00000463007 RANBP1P43487 201 aa12.94□□□□□ -0.34
HDAC4-208ENST00000463007 MYL6P60660 151 aa12.94□□□□□ -0.34
HDAC4-208ENST00000463007 BST1Q10588 318 aa12.94□□□□□ -0.34
HDAC4-208ENST00000463007 EML3Q32P44 896 aa12.94□□□□□ -0.34
HDAC4-208ENST00000463007 LPCAT4Q643R3 524 aa12.94□□□□□ -0.34
HDAC4-208ENST00000463007 C16orf46Q6P387 395 aa12.94□□□□□ -0.34
HDAC4-208ENST00000463007 DLK2Q6UY11 383 aa12.94□□□□□ -0.34
HDAC4-208ENST00000463007 ENDOVQ8N8Q3 282 aaKnown RBP12.94□□□□□ -0.34
HDAC4-208ENST00000463007 BANPQ8N9N5 519 aa12.94□□□□□ -0.34
HDAC4-208ENST00000463007 FAF2Q96CS3 445 aa12.94□□□□□ -0.34
HDAC4-208ENST00000463007 SRPK1Q96SB4 655 aaKnown RBP12.94□□□□□ -0.34
HDAC4-208ENST00000463007 CGRRF1Q99675 332 aa12.94□□□□□ -0.34
HDAC4-208ENST00000463007 RAB6BQ9NRW1 208 aa12.94□□□□□ -0.34
HDAC4-208ENST00000463007 GPATCH2LQ9NWQ4 482 aa12.94□□□□□ -0.34
HDAC4-208ENST00000463007 SLC17A6Q9P2U8 582 aa12.94□□□□□ -0.34
HDAC4-208ENST00000463007 A0A0G2JLL6 359 aaPredicted RBP12.94□□□□□ -0.34
HDAC4-208ENST00000463007 CXorf49A8MYA2 514 aaPredicted RBP12.94□□□□□ -0.34
HDAC4-208ENST00000463007 PRR5-ARHGAP8B1AHC4 643 aa12.94□□□□□ -0.34
HDAC4-208ENST00000463007 MSCO60682 206 aa12.94□□□□□ -0.34
HDAC4-208ENST00000463007 CSDE1O75534 798 aaKnown RBP12.94□□□□□ -0.34
HDAC4-208ENST00000463007 LYPLA1O75608 230 aaPredicted RBP12.94□□□□□ -0.34
HDAC4-208ENST00000463007 CIB2O75838 187 aa12.94□□□□□ -0.34
HDAC4-208ENST00000463007 FESP07332 822 aa12.94□□□□□ -0.34
HDAC4-208ENST00000463007 CDKN2BP42772 138 aa12.94□□□□□ -0.34
HDAC4-208ENST00000463007 ARHGAP8P85298 464 aa12.94□□□□□ -0.34
HDAC4-208ENST00000463007 ZRSR2Q15696 482 aaKnown RBP12.94□□□□□ -0.34
HDAC4-208ENST00000463007 PRRT2Q7Z6L0 340 aaPredicted RBP12.94□□□□□ -0.34
HDAC4-208ENST00000463007 PPIL6Q8IXY8 311 aa12.94□□□□□ -0.34
HDAC4-208ENST00000463007 THNSL1Q8IYQ7 743 aa12.94□□□□□ -0.34
HDAC4-208ENST00000463007 DEPTORQ8TB45 409 aa12.94□□□□□ -0.34
HDAC4-208ENST00000463007 ZNF184Q99676 751 aaPredicted RBP12.94□□□□□ -0.34
HDAC4-208ENST00000463007 TCRBV5S1A1TA0A578 114 aa12.93□□□□□ -0.34
HDAC4-208ENST00000463007 TMEM191CA6NGB0 347 aa12.93□□□□□ -0.34
HDAC4-208ENST00000463007 KIF3CO14782 793 aa12.93□□□□□ -0.34
HDAC4-208ENST00000463007 ADCY3O60266 1144 aa12.93□□□□□ -0.34
HDAC4-208ENST00000463007 TMEM191BP0C7N4 346 aa12.93□□□□□ -0.34
HDAC4-208ENST00000463007 SRGAP2CP0DJJ0 459 aa12.93□□□□□ -0.34
HDAC4-208ENST00000463007 MSX2P35548 267 aaPredicted RBP12.93□□□□□ -0.34
HDAC4-208ENST00000463007 ZNF200P98182 395 aaPredicted RBP12.93□□□□□ -0.34
HDAC4-208ENST00000463007 GRM1Q13255 1194 aa12.93□□□□□ -0.34
HDAC4-208ENST00000463007 EFHC2Q5JST6 749 aa12.93□□□□□ -0.34
HDAC4-208ENST00000463007 CWF19L1Q69YN2 538 aaKnown RBP12.93□□□□□ -0.34
HDAC4-208ENST00000463007 OR52E8Q6IFG1 317 aa12.93□□□□□ -0.34
HDAC4-208ENST00000463007 PLEKHA7Q6IQ23 1121 aa12.93□□□□□ -0.34
HDAC4-208ENST00000463007 EEPD1Q7L9B9 569 aa12.93□□□□□ -0.34
HDAC4-208ENST00000463007 DCAKDQ8WVC6 231 aa12.93□□□□□ -0.34
HDAC4-208ENST00000463007 TFAP2BQ92481 460 aa12.93□□□□□ -0.34
HDAC4-208ENST00000463007 ATXN7L3BQ96GX2 97 aa12.93□□□□□ -0.34
HDAC4-208ENST00000463007 ETAA1Q9NY74 926 aa12.93□□□□□ -0.34
HDAC4-208ENST00000463007 IL1RAPL1Q9NZN1 696 aa12.93□□□□□ -0.34
HDAC4-208ENST00000463007 MCM3APO60318 1980 aa12.93□□□□□ -0.34
HDAC4-208ENST00000463007 AHCYL1O43865 530 aa12.93□□□□□ -0.34
HDAC4-208ENST00000463007 DLDP09622 509 aaKnown RBP12.93□□□□□ -0.34
HDAC4-208ENST00000463007 KRT3P12035 628 aa12.93□□□□□ -0.34
HDAC4-208ENST00000463007 SERPINB6P35237 376 aa12.93□□□□□ -0.34
HDAC4-208ENST00000463007 OASLQ15646 514 aaKnown RBP12.93□□□□□ -0.34
HDAC4-208ENST00000463007 SLFN12LQ6IEE8 588 aa12.93□□□□□ -0.34
HDAC4-208ENST00000463007 IRGCQ6NXR0 463 aa12.93□□□□□ -0.34
HDAC4-208ENST00000463007 CASC4Q6P4E1 433 aa12.93□□□□□ -0.34
HDAC4-208ENST00000463007 NUDCD3Q8IVD9 361 aa12.93□□□□□ -0.34
HDAC4-208ENST00000463007 SCUBE1Q8IWY4 988 aa12.93□□□□□ -0.34
HDAC4-208ENST00000463007 CCDC110Q8TBZ0 833 aa12.93□□□□□ -0.34
HDAC4-208ENST00000463007 PTCD3Q96EY7 689 aaKnown RBP12.93□□□□□ -0.34
HDAC4-208ENST00000463007 SLC24A2Q9UI40 661 aa12.93□□□□□ -0.34
HDAC4-208ENST00000463007 PPME1Q9Y570 386 aa12.93□□□□□ -0.34
HDAC4-208ENST00000463007 LIN7AO14910 233 aaPredicted RBP12.93□□□□□ -0.34
HDAC4-208ENST00000463007 GSTT1P30711 240 aa12.93□□□□□ -0.34
HDAC4-208ENST00000463007 PSMC1P62191 440 aaKnown RBP12.93□□□□□ -0.34
HDAC4-208ENST00000463007 CRADDP78560 199 aa12.93□□□□□ -0.34
HDAC4-208ENST00000463007 RALGPS1Q5JS13 557 aa12.93□□□□□ -0.34
HDAC4-208ENST00000463007 TCHHL1Q5QJ38 904 aaPredicted RBP12.93□□□□□ -0.34
HDAC4-208ENST00000463007 C6orf163Q5TEZ5 329 aa12.93□□□□□ -0.34
HDAC4-208ENST00000463007 ZPBP2Q6X784 338 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms