RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 CEP68Q76N32 757 aa12.48□□□□□ -0.41
SOX2-OT-201ENST00000460739 GPRIN1Q7Z2K8 1008 aa12.48□□□□□ -0.41
SOX2-OT-201ENST00000460739 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.48□□□□□ -0.41
SOX2-OT-201ENST00000460739 TTC39CQ8N584 583 aa12.48□□□□□ -0.41
SOX2-OT-201ENST00000460739 FAM160A2Q8N612 972 aaPredicted RBP12.48□□□□□ -0.41
SOX2-OT-201ENST00000460739 FBXL13Q8NEE6 735 aa12.48□□□□□ -0.41
SOX2-OT-201ENST00000460739 USP33Q8TEY7 942 aa12.48□□□□□ -0.41
SOX2-OT-201ENST00000460739 SEMA4DQ92854 862 aa12.48□□□□□ -0.41
SOX2-OT-201ENST00000460739 TIGD1Q96MW7 591 aa12.48□□□□□ -0.41
SOX2-OT-201ENST00000460739 GTPBP4Q9BZE4 634 aaKnown RBP12.48□□□□□ -0.41
SOX2-OT-201ENST00000460739 DNAI2Q9GZS0 605 aa12.48□□□□□ -0.41
SOX2-OT-201ENST00000460739 FAM124BQ9H5Z6 455 aaPredicted RBP12.48□□□□□ -0.41
SOX2-OT-201ENST00000460739 TLR8Q9NR97 1041 aaKnown RBP12.48□□□□□ -0.41
SOX2-OT-201ENST00000460739 POLR3BQ9NW08 1133 aaPredicted RBP12.48□□□□□ -0.41
SOX2-OT-201ENST00000460739 USP18Q9UMW8 372 aa12.48□□□□□ -0.41
SOX2-OT-201ENST00000460739 SCML2Q9UQR0 700 aa12.48□□□□□ -0.41
SOX2-OT-201ENST00000460739 A0A0A0MRY4 1105 aa12.47□□□□□ -0.41
SOX2-OT-201ENST00000460739 SCAMP3O14828 347 aaKnown RBP12.47□□□□□ -0.41
SOX2-OT-201ENST00000460739 SLC16A3O15427 465 aaKnown RBP12.47□□□□□ -0.41
SOX2-OT-201ENST00000460739 TLR5O60602 858 aa12.47□□□□□ -0.41
SOX2-OT-201ENST00000460739 RPP40O75818 363 aaKnown RBP12.47□□□□□ -0.41
SOX2-OT-201ENST00000460739 ADH1CP00326 375 aa12.47□□□□□ -0.41
SOX2-OT-201ENST00000460739 ADH5P11766 374 aa12.47□□□□□ -0.41
SOX2-OT-201ENST00000460739 FKBP3Q00688 224 aaKnown RBP12.47□□□□□ -0.41
SOX2-OT-201ENST00000460739 DMC1Q14565 340 aa12.47□□□□□ -0.41
SOX2-OT-201ENST00000460739 ANKRD40Q6AI12 368 aa12.47□□□□□ -0.41
SOX2-OT-201ENST00000460739 SMARCE1Q969G3 411 aa12.47□□□□□ -0.41
SOX2-OT-201ENST00000460739 HHIPQ96QV1 700 aa12.47□□□□□ -0.41
SOX2-OT-201ENST00000460739 PNKPQ96T60 521 aa12.47□□□□□ -0.41
SOX2-OT-201ENST00000460739 TSG101Q99816 390 aa12.47□□□□□ -0.41
SOX2-OT-201ENST00000460739 CYLDQ9NQC7 956 aa12.47□□□□□ -0.41
SOX2-OT-201ENST00000460739 RAB20Q9NX57 234 aa12.47□□□□□ -0.41
SOX2-OT-201ENST00000460739 EBF1Q9UH73 591 aa12.47□□□□□ -0.41
SOX2-OT-201ENST00000460739 SH3BP1Q9Y3L3 701 aa12.47□□□□□ -0.41
SOX2-OT-201ENST00000460739 PCDHA5Q9Y5H7 936 aa12.47□□□□□ -0.41
SOX2-OT-201ENST00000460739 AXIN1O15169 862 aa12.46□□□□□ -0.41
SOX2-OT-201ENST00000460739 CYP26A1O43174 497 aa12.46□□□□□ -0.41
SOX2-OT-201ENST00000460739 GREM1O60565 184 aa12.46□□□□□ -0.41
SOX2-OT-201ENST00000460739 APBB3O95704 486 aa12.46□□□□□ -0.41
SOX2-OT-201ENST00000460739 ACO1P21399 889 aaKnown RBP12.46□□□□□ -0.41
SOX2-OT-201ENST00000460739 SLC6A11P48066 632 aa12.46□□□□□ -0.41
SOX2-OT-201ENST00000460739 PMS1P54277 932 aaKnown RBP12.46□□□□□ -0.41
SOX2-OT-201ENST00000460739 MRPS21P82921 87 aaKnown RBP12.46□□□□□ -0.41
SOX2-OT-201ENST00000460739 LRRC63Q05C16 580 aa12.46□□□□□ -0.41
SOX2-OT-201ENST00000460739 CSRP2Q16527 193 aa12.46□□□□□ -0.41
SOX2-OT-201ENST00000460739 C2orf27AQ580R0 203 aa12.46□□□□□ -0.41
SOX2-OT-201ENST00000460739 LY6G5CQ5SRR4 150 aa12.46□□□□□ -0.41
SOX2-OT-201ENST00000460739 PPP1R26Q5T8A7 1209 aaPredicted RBP12.46□□□□□ -0.41
SOX2-OT-201ENST00000460739 DGLUCYQ7Z3D6 616 aa12.46□□□□□ -0.41
SOX2-OT-201ENST00000460739 CACNA2D4Q7Z3S7 1137 aa12.46□□□□□ -0.41
SOX2-OT-201ENST00000460739 C12orf40Q86WS4 652 aa12.46□□□□□ -0.41
SOX2-OT-201ENST00000460739 BBS7Q8IWZ6 715 aa12.46□□□□□ -0.41
SOX2-OT-201ENST00000460739 ELOA2Q8IYF1 753 aaPredicted RBP12.46□□□□□ -0.41
SOX2-OT-201ENST00000460739 ERCC4Q92889 916 aaPredicted RBP12.46□□□□□ -0.41
SOX2-OT-201ENST00000460739 WBP2Q969T9 261 aa12.46□□□□□ -0.41
SOX2-OT-201ENST00000460739 LOXL4Q96JB6 756 aa12.46□□□□□ -0.41
SOX2-OT-201ENST00000460739 ZC3H10Q96K80 434 aaKnown RBP12.46□□□□□ -0.41
SOX2-OT-201ENST00000460739 KLF16Q9BXK1 252 aaPredicted RBP12.46□□□□□ -0.41
SOX2-OT-201ENST00000460739 DUSP16Q9BY84 665 aa12.46□□□□□ -0.41
SOX2-OT-201ENST00000460739 NACA2Q9H009 215 aa12.46□□□□□ -0.41
SOX2-OT-201ENST00000460739 CISHQ9NSE2 258 aa12.46□□□□□ -0.41
SOX2-OT-201ENST00000460739 SEMA4GQ9NTN9 838 aa12.46□□□□□ -0.41
SOX2-OT-201ENST00000460739 OSER1Q9NX31 292 aa12.46□□□□□ -0.41
SOX2-OT-201ENST00000460739 HOOK1Q9UJC3 728 aaKnown RBP12.46□□□□□ -0.41
SOX2-OT-201ENST00000460739 COQ4Q9Y3A0 265 aa12.46□□□□□ -0.41
SOX2-OT-201ENST00000460739 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 HOXC11O43248 304 aaPredicted RBP12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 FOXD2O60548 495 aaPredicted RBP12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 KAT7O95251 611 aa12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 TBX18O95935 607 aa12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 APODP05090 189 aa12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 CCDC192P0DO97 292 aa12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 CHRM1P11229 460 aaPredicted RBP12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 ATP5C1P36542 298 aaKnown RBP12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 PSEN1P49768 467 aa12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 KIF11P52732 1056 aa12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 RAD23BP54727 409 aa12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 SEC13P55735 322 aa12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 GAD2Q05329 585 aa12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 MESP2Q0VG99 397 aa12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 CBWD6Q4V339 395 aa12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 ZNF394Q53GI3 561 aa12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 CBWD3Q5JTY5 395 aa12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 CBWD5Q5RIA9 395 aa12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 TCERG1LQ5VWI1 586 aa12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 KLHDC10Q6PID8 442 aa12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 HTR3DQ70Z44 454 aa12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 CCDC186Q7Z3E2 898 aa12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 KBTBD6Q86V97 674 aa12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 ETFBKMTQ8IXQ9 262 aa12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 PHTF2Q8N3S3 785 aa12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 ZNF276Q8N554 614 aa12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 SLC4A11Q8NBS3 891 aa12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 TATDN2Q93075 761 aa12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 JAKMIP2Q96AA8 810 aa12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 TMEM176AQ96HP8 235 aa12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 HEXIM2Q96MH2 286 aaKnown RBP12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 ARID3AQ99856 593 aa12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 NMUR1Q9HB89 426 aa12.45□□□□□ -0.42
SOX2-OT-201ENST00000460739 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms