RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 NAIF1Q69YI7 327 aaPredicted RBP11.27□□□□□ -0.61
DDX39A-203ENST00000454233 HEATR6Q6AI08 1181 aaKnown RBP11.27□□□□□ -0.61
DDX39A-203ENST00000454233 TTI2Q6NXR4 508 aa11.27□□□□□ -0.61
DDX39A-203ENST00000454233 FOXR2Q6PJQ5 311 aa11.27□□□□□ -0.61
DDX39A-203ENST00000454233 GPRIN1Q7Z2K8 1008 aa11.27□□□□□ -0.61
DDX39A-203ENST00000454233 TADA2BQ86TJ2 420 aa11.27□□□□□ -0.61
DDX39A-203ENST00000454233 ADGRG2Q8IZP9 1017 aa11.27□□□□□ -0.61
DDX39A-203ENST00000454233 SLC4A11Q8NBS3 891 aa11.27□□□□□ -0.61
DDX39A-203ENST00000454233 ACDQ96AP0 544 aa11.27□□□□□ -0.61
DDX39A-203ENST00000454233 ARID3AQ99856 593 aa11.27□□□□□ -0.61
DDX39A-203ENST00000454233 DUSP9Q99956 384 aaKnown RBP11.27□□□□□ -0.61
DDX39A-203ENST00000454233 FBRSL1Q9HCM7 1045 aaKnown RBP11.27□□□□□ -0.61
DDX39A-203ENST00000454233 GMEB2Q9UKD1 530 aa11.27□□□□□ -0.61
DDX39A-203ENST00000454233 EP300Q09472 2414 aaPredicted RBP11.27□□□□□ -0.61
DDX39A-203ENST00000454233 CYP26A1O43174 497 aa11.26□□□□□ -0.61
DDX39A-203ENST00000454233 FGFR1OPO95684 399 aaKnown RBP11.26□□□□□ -0.61
DDX39A-203ENST00000454233 GNA14O95837 355 aa11.26□□□□□ -0.61
DDX39A-203ENST00000454233 IRF1P10914 325 aa11.26□□□□□ -0.61
DDX39A-203ENST00000454233 RALAP11233 206 aa11.26□□□□□ -0.61
DDX39A-203ENST00000454233 ADH5P11766 374 aa11.26□□□□□ -0.61
DDX39A-203ENST00000454233 BMP6P22004 513 aa11.26□□□□□ -0.61
DDX39A-203ENST00000454233 OPRD1P41143 372 aa11.26□□□□□ -0.61
DDX39A-203ENST00000454233 PSEN1P49768 467 aa11.26□□□□□ -0.61
DDX39A-203ENST00000454233 KIF11P52732 1056 aa11.26□□□□□ -0.61
DDX39A-203ENST00000454233 DMWDQ09019 674 aa11.26□□□□□ -0.61
DDX39A-203ENST00000454233 LRMPQ12912 555 aa11.26□□□□□ -0.61
DDX39A-203ENST00000454233 SIM2Q14190 667 aaPredicted RBP11.26□□□□□ -0.61
DDX39A-203ENST00000454233 BTBD8Q5XKL5 378 aa11.26□□□□□ -0.61
DDX39A-203ENST00000454233 ARHGAP17Q68EM7 881 aa11.26□□□□□ -0.61
DDX39A-203ENST00000454233 PKN3Q6P5Z2 889 aa11.26□□□□□ -0.61
DDX39A-203ENST00000454233 PRR23BQ6ZRT6 265 aa11.26□□□□□ -0.61
DDX39A-203ENST00000454233 WDR5BQ86VZ2 330 aa11.26□□□□□ -0.61
DDX39A-203ENST00000454233 TRIML1Q8N9V2 468 aa11.26□□□□□ -0.61
DDX39A-203ENST00000454233 RPLP0P6Q8NHW5 317 aa11.26□□□□□ -0.61
DDX39A-203ENST00000454233 ZFRQ96KR1 1074 aaKnown RBP11.26□□□□□ -0.61
DDX39A-203ENST00000454233 NT5C1BQ96P26 610 aa11.26□□□□□ -0.61
DDX39A-203ENST00000454233 CYLDQ9NQC7 956 aa11.26□□□□□ -0.61
DDX39A-203ENST00000454233 C2orf42Q9NWW7 574 aa11.26□□□□□ -0.61
DDX39A-203ENST00000454233 HESX1Q9UBX0 185 aa11.26□□□□□ -0.61
DDX39A-203ENST00000454233 NAGPAQ9UK23 515 aa11.26□□□□□ -0.61
DDX39A-203ENST00000454233 LSM7Q9UK45 103 aaKnown RBP11.26□□□□□ -0.61
DDX39A-203ENST00000454233 GVINP1Q7Z2Y8 2422 aa11.25□□□□□ -0.61
DDX39A-203ENST00000454233 A0A1W2PQH9 124 aa11.25□□□□□ -0.61
DDX39A-203ENST00000454233 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.25□□□□□ -0.61
DDX39A-203ENST00000454233 PMM2O15305 246 aa11.25□□□□□ -0.61
DDX39A-203ENST00000454233 P4HA2O15460 535 aa11.25□□□□□ -0.61
DDX39A-203ENST00000454233 APODP05090 189 aa11.25□□□□□ -0.61
DDX39A-203ENST00000454233 RARGP13631 454 aa11.25□□□□□ -0.61
DDX39A-203ENST00000454233 CD19P15391 556 aa11.25□□□□□ -0.61
DDX39A-203ENST00000454233 ANP32AP39687 249 aaKnown RBP11.25□□□□□ -0.61
DDX39A-203ENST00000454233 EIF2DP41214 584 aaKnown RBP11.25□□□□□ -0.61
DDX39A-203ENST00000454233 STX17P56962 302 aa11.25□□□□□ -0.61
DDX39A-203ENST00000454233 GAD2Q05329 585 aa11.25□□□□□ -0.61
DDX39A-203ENST00000454233 SGO2Q562F6 1265 aa11.25□□□□□ -0.61
DDX39A-203ENST00000454233 C10orf120Q5SQS8 335 aa11.25□□□□□ -0.61
DDX39A-203ENST00000454233 LY6G5CQ5SRR4 150 aa11.25□□□□□ -0.61
DDX39A-203ENST00000454233 LAIR1Q6GTX8 287 aa11.25□□□□□ -0.61
DDX39A-203ENST00000454233 KLHDC10Q6PID8 442 aa11.25□□□□□ -0.61
DDX39A-203ENST00000454233 RHBDF2Q6PJF5 856 aa11.25□□□□□ -0.61
DDX39A-203ENST00000454233 CEP68Q76N32 757 aa11.25□□□□□ -0.61
DDX39A-203ENST00000454233 CCDC186Q7Z3E2 898 aa11.25□□□□□ -0.61
DDX39A-203ENST00000454233 KIAA2013Q8IYS2 634 aa11.25□□□□□ -0.61
DDX39A-203ENST00000454233 ARHGAP18Q8N392 663 aa11.25□□□□□ -0.61
DDX39A-203ENST00000454233 DCLK2Q8N568 766 aa11.25□□□□□ -0.61
DDX39A-203ENST00000454233 CAMKK1Q8N5S9 505 aa11.25□□□□□ -0.61
DDX39A-203ENST00000454233 GPR161Q8N6U8 529 aaKnown RBP11.25□□□□□ -0.61
DDX39A-203ENST00000454233 ANKRD52Q8NB46 1076 aa11.25□□□□□ -0.61
DDX39A-203ENST00000454233 CDK5RAP1Q96SZ6 601 aaKnown RBP11.25□□□□□ -0.61
DDX39A-203ENST00000454233 PNKPQ96T60 521 aa11.25□□□□□ -0.61
DDX39A-203ENST00000454233 UBXN6Q9BZV1 441 aa11.25□□□□□ -0.61
DDX39A-203ENST00000454233 DNMT3LQ9UJW3 386 aa11.25□□□□□ -0.61
DDX39A-203ENST00000454233 KIAA1257Q9ULG3 409 aa11.25□□□□□ -0.61
DDX39A-203ENST00000454233 OTOGLQ3ZCN5 2332 aa11.25□□□□□ -0.61
DDX39A-203ENST00000454233 MYO16Q9Y6X6 1858 aa11.25□□□□□ -0.61
DDX39A-203ENST00000454233 ATG2BQ96BY7 2078 aa11.24□□□□□ -0.61
DDX39A-203ENST00000454233 CCDC163A0A0D9SF12 145 aa11.24□□□□□ -0.61
DDX39A-203ENST00000454233 HRO43593 1189 aa11.24□□□□□ -0.61
DDX39A-203ENST00000454233 TBX18O95935 607 aa11.24□□□□□ -0.61
DDX39A-203ENST00000454233 CCDC192P0DO97 292 aa11.24□□□□□ -0.61
DDX39A-203ENST00000454233 VDRP11473 427 aa11.24□□□□□ -0.61
DDX39A-203ENST00000454233 PLA2G4AP47712 749 aa11.24□□□□□ -0.61
DDX39A-203ENST00000454233 PGFP49763 221 aa11.24□□□□□ -0.61
DDX39A-203ENST00000454233 BCAT1P54687 386 aa11.24□□□□□ -0.61
DDX39A-203ENST00000454233 SEC13P55735 322 aa11.24□□□□□ -0.61
DDX39A-203ENST00000454233 DMC1Q14565 340 aa11.24□□□□□ -0.61
DDX39A-203ENST00000454233 CAMK4Q16566 473 aa11.24□□□□□ -0.61
DDX39A-203ENST00000454233 LPAL2Q16609 132 aa11.24□□□□□ -0.61
DDX39A-203ENST00000454233 GOLGA7BQ2TAP0 167 aa11.24□□□□□ -0.61
DDX39A-203ENST00000454233 GAB4Q2WGN9 574 aa11.24□□□□□ -0.61
DDX39A-203ENST00000454233 PREPLQ4J6C6 727 aaPredicted RBP11.24□□□□□ -0.61
DDX39A-203ENST00000454233 NUDT18Q6ZVK8 323 aa11.24□□□□□ -0.61
DDX39A-203ENST00000454233 HTR3DQ70Z44 454 aa11.24□□□□□ -0.61
DDX39A-203ENST00000454233 SYT13Q7L8C5 426 aa11.24□□□□□ -0.61
DDX39A-203ENST00000454233 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.24□□□□□ -0.61
DDX39A-203ENST00000454233 PIGZQ86VD9 579 aa11.24□□□□□ -0.61
DDX39A-203ENST00000454233 BBS7Q8IWZ6 715 aa11.24□□□□□ -0.61
DDX39A-203ENST00000454233 PPM1KQ8N3J5 372 aa11.24□□□□□ -0.61
DDX39A-203ENST00000454233 EZH1Q92800 747 aaPredicted RBP11.24□□□□□ -0.61
DDX39A-203ENST00000454233 KLF16Q9BXK1 252 aaPredicted RBP11.24□□□□□ -0.61
DDX39A-203ENST00000454233 SRRTQ9BXP5 876 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms