RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 TRPM8Q7Z2W7 1104 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 PRUNE1Q86TP1 453 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 CDKL3Q8IVW4 592 aaPredicted RBP8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 PQLC3Q8N755 202 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 MZB1Q8WU39 189 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 FAM172AQ8WUF8 416 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 KBTBD7Q8WVZ9 684 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 KCTD13Q8WZ19 329 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 HSPH1Q92598 858 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 ACSF2Q96CM8 615 aaPredicted RBP8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 TNIP3Q96KP6 325 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 SMC6Q96SB8 1091 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 CYTH2Q99418 400 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 PTPN18Q99952 460 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 TRABDQ9H4I3 376 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 KCNK9Q9NPC2 374 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 DNAJC17Q9NVM6 304 aaKnown RBP8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 CTNNAL1Q9UBT7 734 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 NME7Q9Y5B8 376 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 SNX9Q9Y5X1 595 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 TEX264Q9Y6I9 313 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 CAPN7Q9Y6W3 813 aa8.55□□□□□ -1.04
SPIRE1-204ENST00000440472 SMIM28A0A1B0GU29 152 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 TCP11X1B4DZS4 312 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 XPO1O14980 1071 aaKnown RBP8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 TM9SF1O15321 606 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 DYNC1LI2O43237 492 aaPredicted RBP8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 ADCY6O43306 1168 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 GABBR2O75899 941 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 IL1BP01584 269 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 CREB1P16220 341 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 TPSB2P20231 275 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 GNL1P36915 607 aaPredicted RBP8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 TAF6P49848 677 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 HDAC4P56524 1084 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 WDR4P57081 412 aaKnown RBP8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 PDE4CQ08493 712 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 ORC1Q13415 861 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 KRT81Q14533 505 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 FASTKD3Q14CZ7 662 aaKnown RBP8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 TMED2Q15363 201 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 TPSAB1Q15661 275 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 PDK4Q16654 411 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 EFHC1Q5JVL4 640 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 FNBP1LQ5T0N5 605 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 ANKRD22Q5VYY1 191 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 DARS2Q6PI48 645 aaKnown RBP8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 PAXIP1Q6ZW49 1069 aaPredicted RBP8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 BZW1Q7L1Q6 419 aaKnown RBP8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 ACOT1Q86TX2 421 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 PACS2Q86VP3 889 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 SRRM1Q8IYB3 904 aaKnown RBP8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 ZNF398Q8TD17 642 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 MAGEC3Q8TD91 643 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 HNRNPABQ99729 332 aaKnown RBP8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 ELAC2Q9BQ52 826 aaKnown RBP8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 CALN1Q9BXU9 219 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 EIF2AQ9BY44 585 aaKnown RBP8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 VPS37BQ9H9H4 285 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 TUBGCP4Q9UGJ1 667 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 ZNF180Q9UJW8 692 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 KPNA7A9QM74 516 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 ANKRD65E5RJM6 399 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 DNM1LO00429 736 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 TMEM63AO94886 807 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 L1CAMP32004 1257 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 MAGEA3P43357 314 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 AIF1P55008 147 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 BCAR1P56945 870 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 CDK16Q00536 496 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 TAF5Q15542 800 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 C15orf59Q2T9L4 293 aaPredicted RBP8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 TAF2Q6P1X5 1199 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 SPATA21Q7Z572 469 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 RPAINQ86UA6 219 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 TLK2Q86UE8 772 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 HACE1Q8IYU2 909 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 C12orf29Q8N999 325 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 FAM71DQ8N9W8 422 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 PCDH19Q8TAB3 1148 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 NT5C3BQ969T7 300 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 TGS1Q96RS0 853 aaKnown RBP8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 WDR83Q9BRX9 315 aaKnown RBP8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 SNRNP25Q9BV90 132 aaKnown RBP8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 NRDE2Q9H7Z3 1164 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 MKS1Q9NXB0 559 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 XPO7Q9UIA9 1087 aaKnown RBP8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 RAD54BQ9Y620 910 aa8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.54□□□□□ -1.04
SPIRE1-204ENST00000440472 A8MXQ7 604 aa8.53□□□□□ -1.04
SPIRE1-204ENST00000440472 GABRDO14764 452 aa8.53□□□□□ -1.04
SPIRE1-204ENST00000440472 PPEF2O14830 753 aa8.53□□□□□ -1.04
SPIRE1-204ENST00000440472 DAB1O75553 588 aa8.53□□□□□ -1.04
SPIRE1-204ENST00000440472 ALADP13716 330 aa8.53□□□□□ -1.04
SPIRE1-204ENST00000440472 ZNF135P52742 658 aaPredicted RBP8.53□□□□□ -1.04
SPIRE1-204ENST00000440472 DYNLT1P63172 113 aa8.53□□□□□ -1.04
SPIRE1-204ENST00000440472 SLC18A2Q05940 514 aa8.53□□□□□ -1.04
SPIRE1-204ENST00000440472 MSS51Q4VC12 460 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms