RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 DDTLA6NHG4 134 aaPredicted RBP12.13□□□□□ -0.47
SMPD4-209ENST00000439886 E9PBE3 544 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 ATP9BO43861 1147 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 KLHL41O60662 606 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 FKBP6O75344 327 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 PSMD10O75832 226 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 TPPPO94811 219 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 SAT1P21673 171 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 ECE1P42892 770 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 TBL3Q12788 808 aaKnown RBP12.13□□□□□ -0.47
SMPD4-209ENST00000439886 ORC1Q13415 861 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 IGDCC3Q8IVU1 814 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 KATNAL2Q8IYT4 538 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 TTC30BQ8N4P2 665 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 CPT1BQ92523 772 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 USP13Q92995 863 aaPredicted RBP12.13□□□□□ -0.47
SMPD4-209ENST00000439886 CCDC17Q96LX7 622 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 DCUN1D5Q9BTE7 237 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 Q9H521 79 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 CYLDQ9NQC7 956 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 POLLQ9UGP5 575 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 ZC3H7BQ9UGR2 993 aaKnown RBP12.13□□□□□ -0.47
SMPD4-209ENST00000439886 DOLKQ9UPQ8 538 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 SHOC2Q9UQ13 582 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 GOLGA8QA0A0J9YX86 632 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 GOLGA8OA6NCC3 632 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 GOLGA8NF8WBI6 632 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 DCXO43602 365 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 TMEM63AO94886 807 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 SRGAP2CP0DJJ0 459 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 SRGAP2BP0DMP2 458 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 ATP2B4P23634 1241 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 YWHABP31946 246 aaKnown RBP12.13□□□□□ -0.47
SMPD4-209ENST00000439886 TMED10P49755 219 aaKnown RBP12.13□□□□□ -0.47
SMPD4-209ENST00000439886 MRPS22P82650 360 aaKnown RBP12.13□□□□□ -0.47
SMPD4-209ENST00000439886 KLF1Q13351 362 aaPredicted RBP12.13□□□□□ -0.47
SMPD4-209ENST00000439886 PRKD1Q15139 912 aaPredicted RBP12.13□□□□□ -0.47
SMPD4-209ENST00000439886 AOC3Q16853 763 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 NADK2Q4G0N4 442 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 TFDP3Q5H9I0 405 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 SPATA18Q8TC71 538 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 DCAF4Q8WV16 495 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 CEP170P1Q96L14 293 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 CSRNP1Q96S65 589 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 CCT7Q99832 543 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 EURLQ9NYK6 297 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 STAT2P52630 851 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 PDK1Q15118 436 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 TMCO4Q5TGY1 634 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 ADGRD1Q6QNK2 874 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 MOXD1Q6UVY6 613 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 NPNTQ6UXI9 565 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 PTAR1Q7Z6K3 402 aaPredicted RBP12.13□□□□□ -0.47
SMPD4-209ENST00000439886 TDRPQ86YL5 185 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 DGCR14Q96DF8 476 aaKnown RBP12.13□□□□□ -0.47
SMPD4-209ENST00000439886 CAAP1Q9H8G2 361 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 COPS7BQ9H9Q2 264 aaPredicted RBP12.13□□□□□ -0.47
SMPD4-209ENST00000439886 INIPQ9NRY2 104 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 FBXO28Q9NVF7 368 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 BTBD7Q9P203 1132 aa12.13□□□□□ -0.47
SMPD4-209ENST00000439886 MAGEC1O60732 1142 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 RAD17O75943 681 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 SNRPAP09012 282 aaKnown RBP12.12□□□□□ -0.47
SMPD4-209ENST00000439886 GSTT2P0CG29 244 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 GSTT2BP0CG30 244 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 HSPA8P11142 646 aaKnown RBP12.12□□□□□ -0.47
SMPD4-209ENST00000439886 GTF2H1P32780 548 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 CIITAP33076 1130 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 SERPINB5P36952 375 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 CCR3P51677 355 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 SH3BGRP55822 239 aaPredicted RBP12.12□□□□□ -0.47
SMPD4-209ENST00000439886 PRAMEP78395 509 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 PHEXP78562 749 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 KRT81Q14533 505 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 OASLQ15646 514 aaKnown RBP12.12□□□□□ -0.47
SMPD4-209ENST00000439886 NRF1Q16656 503 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 SLC10A5Q5PT55 438 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 CCSAPQ6IQ19 270 aaPredicted RBP12.12□□□□□ -0.47
SMPD4-209ENST00000439886 KLHDC10Q6PID8 442 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 PCGF5Q86SE9 256 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 DCAKDQ8WVC6 231 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 PGBD4Q96DM1 585 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 CATSPER2Q96P56 530 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 RETREG1Q9H6L5 497 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 PCDH9Q9HC56 1237 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 TRPV5Q9NQA5 729 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 NXF1Q9UBU9 619 aaKnown RBP12.12□□□□□ -0.47
SMPD4-209ENST00000439886 NARFQ9UHQ1 456 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 SPATA31A1Q5TZJ5 1347 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 P4HBP07237 508 aaKnown RBP12.12□□□□□ -0.47
SMPD4-209ENST00000439886 ENO3P13929 434 aaPredicted RBP12.12□□□□□ -0.47
SMPD4-209ENST00000439886 HOXA10P31260 410 aaPredicted RBP12.12□□□□□ -0.47
SMPD4-209ENST00000439886 RGS2P41220 211 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 QARSP47897 775 aaKnown RBP12.12□□□□□ -0.47
SMPD4-209ENST00000439886 PKNOX1P55347 436 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 LRP8Q14114 963 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 C16orf72Q14CZ0 275 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 FAM98CQ17RN3 349 aaKnown RBP12.12□□□□□ -0.47
SMPD4-209ENST00000439886 C6orf52Q5T4I8 152 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 DEPDC1BQ8WUY9 529 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms