RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 SLFN11Q7Z7L1 901 aa12.02□□□□□ -0.49
TRAPPC9-202ENST00000438773 PRELID2Q8N945 189 aa12.02□□□□□ -0.49
TRAPPC9-202ENST00000438773 GSDMBQ8TAX9 411 aa12.02□□□□□ -0.49
TRAPPC9-202ENST00000438773 PLEKHO2Q8TD55 490 aa12.02□□□□□ -0.49
TRAPPC9-202ENST00000438773 C18orf25Q96B23 403 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC9-202ENST00000438773 FAM129AQ9BZQ8 928 aa12.02□□□□□ -0.49
TRAPPC9-202ENST00000438773 C2CD2LO14523 706 aa12.02□□□□□ -0.49
TRAPPC9-202ENST00000438773 MMP8P22894 467 aa12.02□□□□□ -0.49
TRAPPC9-202ENST00000438773 VCPP55072 806 aaKnown RBP12.02□□□□□ -0.49
TRAPPC9-202ENST00000438773 BIRC2Q13490 618 aa12.02□□□□□ -0.49
TRAPPC9-202ENST00000438773 C15orf59Q2T9L4 293 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC9-202ENST00000438773 MAP7D1Q3KQU3 841 aa12.02□□□□□ -0.49
TRAPPC9-202ENST00000438773 AGBL2Q5U5Z8 902 aa12.02□□□□□ -0.49
TRAPPC9-202ENST00000438773 CYB5D1Q6P9G0 228 aa12.02□□□□□ -0.49
TRAPPC9-202ENST00000438773 FAM228AQ86W67 206 aa12.02□□□□□ -0.49
TRAPPC9-202ENST00000438773 DTX3LQ8TDB6 740 aa12.02□□□□□ -0.49
TRAPPC9-202ENST00000438773 FBXL18Q96ME1 805 aa12.02□□□□□ -0.49
TRAPPC9-202ENST00000438773 CDC42EP4Q9H3Q1 356 aaKnown RBP12.02□□□□□ -0.49
TRAPPC9-202ENST00000438773 TRABDQ9H4I3 376 aa12.02□□□□□ -0.49
TRAPPC9-202ENST00000438773 CNTNAP2Q9UHC6 1331 aa12.02□□□□□ -0.49
TRAPPC9-202ENST00000438773 DNPEPQ9ULA0 475 aa12.02□□□□□ -0.49
TRAPPC9-202ENST00000438773 PFDN6O15212 129 aa12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 TSPAN1O60635 241 aa12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 YWHAZP63104 245 aaKnown RBP12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 LONP2Q86WA8 852 aa12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 UNC93AQ86WB7 457 aa12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 KATNAL2Q8IYT4 538 aa12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 C4orf33Q8N1A6 199 aa12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 ZNF516Q92618 1163 aa12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 LPPQ93052 612 aa12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 CHMP6Q96FZ7 201 aa12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 GCNAQ96QF7 691 aa12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 ROPN1BQ9BZX4 212 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 VPS11Q9H270 941 aa12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 ACTR5Q9H9F9 607 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 ROPN1Q9HAT0 212 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 COG5Q9UP83 839 aa12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 TCP11X1B4DZS4 312 aa12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 ALDH7A1P49419 539 aaKnown RBP12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 ZNF200P98182 395 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 SLC6A3Q01959 620 aa12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 YWHAHQ04917 246 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 FUKQ8N0W3 1084 aa12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 EDEM1Q92611 657 aa12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 COLEC11Q9BWP8 271 aa12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 ZFATQ9P243 1243 aa12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 NOCTQ9UK39 431 aaKnown RBP12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 ADAMTS5Q9UNA0 930 aa12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 ATP11BQ9Y2G3 1177 aa12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 CHN1P15882 459 aa12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 ATP4AP20648 1035 aa12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 TMPRSS15P98073 1019 aa12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 CCL14Q16627 93 aa12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 YTHDF3Q7Z739 585 aaKnown RBP12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 LRRC43Q8N309 656 aa12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 DCLK2Q8N568 766 aa12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 PDCD6IPQ8WUM4 868 aaKnown RBP12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 TRIM4Q9C037 500 aa12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 MINDY3Q9H8M7 445 aa12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 GOLGA2P5Q9HBQ8 144 aa12.01□□□□□ -0.49
TRAPPC9-202ENST00000438773 CCDC78A2IDD5 438 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 F9P00740 461 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 CD52P31358 61 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 ANKRD20A8PQ5CZ79 823 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 UBAP2Q5T6F2 1119 aaKnown RBP12□□□□□ -0.49
TRAPPC9-202ENST00000438773 NXNQ6DKJ4 435 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 LRRC57Q8N9N7 239 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 EPS8L3Q8TE67 593 aaKnown RBP12□□□□□ -0.49
TRAPPC9-202ENST00000438773 NUDCD1Q96RS6 583 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 NOP53Q9NZM5 478 aaKnown RBP12□□□□□ -0.49
TRAPPC9-202ENST00000438773 SENP1Q9P0U3 644 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 SAE1Q9UBE0 346 aaPredicted RBP12□□□□□ -0.49
TRAPPC9-202ENST00000438773 DSEQ9UL01 958 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 PQBP1O60828 265 aaKnown RBP12□□□□□ -0.49
TRAPPC9-202ENST00000438773 DUSP11O75319 330 aaKnown RBP12□□□□□ -0.49
TRAPPC9-202ENST00000438773 LGR5O75473 907 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 TMC3Q7Z5M5 1100 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 MIB1Q86YT6 1006 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 DEFB106AQ8N104 65 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 ATPAF2Q8N5M1 289 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 LRRC52Q8N7C0 313 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 TFB1MQ8WVM0 346 aaKnown RBP12□□□□□ -0.49
TRAPPC9-202ENST00000438773 PABPC5Q96DU9 382 aaKnown RBP12□□□□□ -0.49
TRAPPC9-202ENST00000438773 SLITRK1Q96PX8 696 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 TGS1Q96RS0 853 aaKnown RBP12□□□□□ -0.49
TRAPPC9-202ENST00000438773 FIZ1Q96SL8 496 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 HTATIP2Q9BUP3 242 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 KIF9Q9HAQ2 790 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 TUBGCP4Q9UGJ1 667 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 TMEM59LQ9UK28 342 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 ATXN2Q99700 1313 aaKnown RBP12□□□□□ -0.49
TRAPPC9-202ENST00000438773 SMAPO00193 183 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 FBXO21O94952 628 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 ATG7O95352 703 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 PIGRP01833 764 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 SHBGP04278 402 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 RAG1P15918 1043 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 PMLP29590 882 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 TAS2R40P59535 323 aa12□□□□□ -0.49
TRAPPC9-202ENST00000438773 SLC10A6Q3KNW5 377 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms