RNA–Protein interactions for RNA: ENST00000429921.5

RPE-206, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-206ENST00000429921 DCAF6Q58WW2 860 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 SYPL2Q5VXT5 272 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 DSTYKQ6XUX3 929 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 APBB1IPQ7Z5R6 666 aaPredicted RBP10.57□□□□□ -0.72
RPE-206ENST00000429921 HOOK3Q86VS8 718 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 NLRP14Q86W24 1093 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 NT5DC4Q86YG4 428 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 TP53INP2Q8IXH6 220 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 DEFB106AQ8N104 65 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 PCDH19Q8TAB3 1148 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 CCT8L2Q96SF2 557 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 TMEM209Q96SK2 561 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 PRMT1Q99873 361 aaKnown RBP10.57□□□□□ -0.72
RPE-206ENST00000429921 TRIM56Q9BRZ2 755 aaKnown RBP10.57□□□□□ -0.72
RPE-206ENST00000429921 CRTAC1Q9NQ79 661 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 HOMER3Q9NSC5 361 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 DDX43Q9NXZ2 648 aaKnown RBP10.57□□□□□ -0.72
RPE-206ENST00000429921 DERAQ9Y315 318 aa10.57□□□□□ -0.72
RPE-206ENST00000429921 ZNF638Q14966 1978 aaKnown RBP10.57□□□□□ -0.72
RPE-206ENST00000429921 SPAG7O75391 227 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 TRPA1O75762 1119 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 STAU1O95793 577 aaKnown RBP10.56□□□□□ -0.72
RPE-206ENST00000429921 AMHP03971 560 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 ITGB1P05556 798 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 KCNE1P15382 129 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 PTPN1P18031 435 aaKnown RBP10.56□□□□□ -0.72
RPE-206ENST00000429921 AMPD1P23109 780 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 RBL1P28749 1068 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 EIF3BP55884 814 aaKnown RBP10.56□□□□□ -0.72
RPE-206ENST00000429921 GJA9P57773 515 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 GBE1Q04446 702 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 BST2Q10589 180 aaKnown RBP10.56□□□□□ -0.72
RPE-206ENST00000429921 BBS9Q3SYG4 887 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 RNASEH2BQ5TBB1 312 aaKnown RBP10.56□□□□□ -0.72
RPE-206ENST00000429921 BBS12Q6ZW61 710 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 POLNQ7Z5Q5 900 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 TMEM110Q86TL2 294 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 PQLC3Q8N755 202 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 ANKRD52Q8NB46 1076 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 ZNF473Q8WTR7 871 aaKnown RBP10.56□□□□□ -0.72
RPE-206ENST00000429921 CPT1BQ92523 772 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 P3H4Q92791 437 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 PPP1R10Q96QC0 940 aaKnown RBP10.56□□□□□ -0.72
RPE-206ENST00000429921 PCDH18Q9HCL0 1135 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 SNX10Q9Y5X0 201 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 NRP1O14786 923 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 KCNN4O15554 427 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 TMEM63AO94886 807 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 AXLP30530 894 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 COPS2P61201 443 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 CDC42EP1Q00587 391 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 SREBF2Q12772 1141 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 SLC10A2Q12908 348 aaPredicted RBP10.56□□□□□ -0.72
RPE-206ENST00000429921 MPP2Q14168 576 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 SV2CQ496J9 727 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 ANKRD20A8PQ5CZ79 823 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 SYDE1Q6ZW31 735 aaPredicted RBP10.56□□□□□ -0.72
RPE-206ENST00000429921 TRMT10CQ7L0Y3 403 aaKnown RBP10.56□□□□□ -0.72
RPE-206ENST00000429921 IGDCC3Q8IVU1 814 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 SRRM1Q8IYB3 904 aaKnown RBP10.56□□□□□ -0.72
RPE-206ENST00000429921 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.56□□□□□ -0.72
RPE-206ENST00000429921 CCDC110Q8TBZ0 833 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 FNIP1Q8TF40 1166 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 EDEM1Q92611 657 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 ARHGEF2Q92974 986 aaKnown RBP10.56□□□□□ -0.72
RPE-206ENST00000429921 RNF157Q96PX1 679 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 TRPV6Q9H1D0 765 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 EPN3Q9H201 632 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 C12orf65Q9H3J6 166 aaKnown RBP10.56□□□□□ -0.72
RPE-206ENST00000429921 KRT82Q9NSB4 513 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 KIAA1257Q9ULG3 409 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 NAALADL1Q9UQQ1 740 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 NOD1Q9Y239 953 aa10.56□□□□□ -0.72
RPE-206ENST00000429921 IGHA2P01877 340 aa10.55□□□□□ -0.72
RPE-206ENST00000429921 ITGAVP06756 1048 aa10.55□□□□□ -0.72
RPE-206ENST00000429921 THP07101 528 aa10.55□□□□□ -0.72
RPE-206ENST00000429921 GOT1P17174 413 aa10.55□□□□□ -0.72
RPE-206ENST00000429921 NUMBP49757 651 aa10.55□□□□□ -0.72
RPE-206ENST00000429921 SULT1E1P49888 294 aa10.55□□□□□ -0.72
RPE-206ENST00000429921 BCAR1P56945 870 aa10.55□□□□□ -0.72
RPE-206ENST00000429921 C6orf118Q5T5N4 469 aa10.55□□□□□ -0.72
RPE-206ENST00000429921 ZCCHC9Q8N567 271 aaKnown RBP10.55□□□□□ -0.72
RPE-206ENST00000429921 PLD5Q8N7P1 536 aa10.55□□□□□ -0.72
RPE-206ENST00000429921 MYCBPAPQ8TBZ2 947 aa10.55□□□□□ -0.72
RPE-206ENST00000429921 CD99L2Q8TCZ2 262 aa10.55□□□□□ -0.72
RPE-206ENST00000429921 PRCCQ92733 491 aaPredicted RBP10.55□□□□□ -0.72
RPE-206ENST00000429921 ZNF560Q96MR9 790 aa10.55□□□□□ -0.72
RPE-206ENST00000429921 ADAM2Q99965 735 aa10.55□□□□□ -0.72
RPE-206ENST00000429921 PAIP2Q9BPZ3 127 aaKnown RBP10.55□□□□□ -0.72
RPE-206ENST00000429921 WDR83Q9BRX9 315 aaKnown RBP10.55□□□□□ -0.72
RPE-206ENST00000429921 SENP6Q9GZR1 1112 aaPredicted RBP10.55□□□□□ -0.72
RPE-206ENST00000429921 XPO7Q9UIA9 1087 aaKnown RBP10.55□□□□□ -0.72
RPE-206ENST00000429921 HGSO14964 777 aaPredicted RBP10.55□□□□□ -0.72
RPE-206ENST00000429921 MCF2LO15068 1137 aa10.55□□□□□ -0.72
RPE-206ENST00000429921 SEPT4O43236 478 aa10.55□□□□□ -0.72
RPE-206ENST00000429921 CREB3O43889 395 aa10.55□□□□□ -0.72
RPE-206ENST00000429921 ADAMTS4O75173 837 aa10.55□□□□□ -0.72
RPE-206ENST00000429921 USP17L7P0C7H9 530 aa10.55□□□□□ -0.72
RPE-206ENST00000429921 CYP2F1P24903 491 aa10.55□□□□□ -0.72
RPE-206ENST00000429921 GBP1P32455 592 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms