RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 NAGPAQ9UK23 515 aa21.78■■□□□ 1.08
HSPG2-205ENST00000427897 LSM7Q9UK45 103 aaKnown RBP21.78■■□□□ 1.08
HSPG2-205ENST00000427897 KIAA1257Q9ULG3 409 aa21.78■■□□□ 1.08
HSPG2-205ENST00000427897 HHLA1C9JL84 531 aa21.77■■□□□ 1.08
HSPG2-205ENST00000427897 CYP26A1O43174 497 aa21.77■■□□□ 1.08
HSPG2-205ENST00000427897 ADH1CP00326 375 aa21.77■■□□□ 1.08
HSPG2-205ENST00000427897 EGFP01133 1207 aa21.77■■□□□ 1.08
HSPG2-205ENST00000427897 ZDHHC11BP0C7U3 371 aa21.77■■□□□ 1.08
HSPG2-205ENST00000427897 VDRP11473 427 aa21.77■■□□□ 1.08
HSPG2-205ENST00000427897 GOLGA7BQ2TAP0 167 aa21.77■■□□□ 1.08
HSPG2-205ENST00000427897 BTBD8Q5XKL5 378 aa21.77■■□□□ 1.08
HSPG2-205ENST00000427897 ARHGAP17Q68EM7 881 aa21.77■■□□□ 1.08
HSPG2-205ENST00000427897 MLKLQ8NB16 471 aa21.77■■□□□ 1.08
HSPG2-205ENST00000427897 ANKRD52Q8NB46 1076 aa21.77■■□□□ 1.08
HSPG2-205ENST00000427897 CCDC26Q8TAB7 109 aa21.77■■□□□ 1.08
HSPG2-205ENST00000427897 RAB23Q9ULC3 237 aa21.77■■□□□ 1.08
HSPG2-205ENST00000427897 SLC8A2Q9UPR5 921 aa21.77■■□□□ 1.08
HSPG2-205ENST00000427897 MYO16Q9Y6X6 1858 aa21.77■■□□□ 1.08
HSPG2-205ENST00000427897 A0A1W2PQH9 124 aa21.76■■□□□ 1.07
HSPG2-205ENST00000427897 GOLGA6L22H0YM25 854 aa21.76■■□□□ 1.07
HSPG2-205ENST00000427897 PMM2O15305 246 aa21.76■■□□□ 1.07
HSPG2-205ENST00000427897 RARGP13631 454 aa21.76■■□□□ 1.07
HSPG2-205ENST00000427897 KIF11P52732 1056 aa21.76■■□□□ 1.07
HSPG2-205ENST00000427897 GAS6Q14393 721 aa21.76■■□□□ 1.07
HSPG2-205ENST00000427897 DHCR24Q15392 516 aa21.76■■□□□ 1.07
HSPG2-205ENST00000427897 C10orf120Q5SQS8 335 aa21.76■■□□□ 1.07
HSPG2-205ENST00000427897 HEATR6Q6AI08 1181 aaKnown RBP21.76■■□□□ 1.07
HSPG2-205ENST00000427897 TMEM270Q6UE05 265 aa21.76■■□□□ 1.07
HSPG2-205ENST00000427897 TRIM59Q8IWR1 403 aa21.76■■□□□ 1.07
HSPG2-205ENST00000427897 ARHGAP18Q8N392 663 aa21.76■■□□□ 1.07
HSPG2-205ENST00000427897 EHBP1Q8NDI1 1231 aa21.76■■□□□ 1.07
HSPG2-205ENST00000427897 SECISBP2LQ93073 1101 aaKnown RBP21.76■■□□□ 1.07
HSPG2-205ENST00000427897 OTUB2Q96DC9 234 aa21.76■■□□□ 1.07
HSPG2-205ENST00000427897 UBXN6Q9BZV1 441 aa21.76■■□□□ 1.07
HSPG2-205ENST00000427897 CLSTN2Q9H4D0 955 aa21.76■■□□□ 1.07
HSPG2-205ENST00000427897 LRRC4Q9HBW1 653 aa21.76■■□□□ 1.07
HSPG2-205ENST00000427897 FBRSL1Q9HCM7 1045 aaKnown RBP21.76■■□□□ 1.07
HSPG2-205ENST00000427897 DACH1Q9UI36 760 aa21.76■■□□□ 1.07
HSPG2-205ENST00000427897 DNMT3LQ9UJW3 386 aa21.76■■□□□ 1.07
HSPG2-205ENST00000427897 TSPAN16Q9UKR8 245 aa21.76■■□□□ 1.07
HSPG2-205ENST00000427897 RNF40O75150 1001 aa21.75■■□□□ 1.07
HSPG2-205ENST00000427897 BCAT1P54687 386 aa21.75■■□□□ 1.07
HSPG2-205ENST00000427897 RRAGAQ7L523 313 aa21.75■■□□□ 1.07
HSPG2-205ENST00000427897 CDK5RAP1Q96SZ6 601 aaKnown RBP21.75■■□□□ 1.07
HSPG2-205ENST00000427897 NUP62CLQ9H1M0 184 aa21.75■■□□□ 1.07
HSPG2-205ENST00000427897 CACNA1IQ9P0X4 2223 aa21.74■■□□□ 1.07
HSPG2-205ENST00000427897 TBX18O95935 607 aa21.74■■□□□ 1.07
HSPG2-205ENST00000427897 CYP17A1P05093 508 aa21.74■■□□□ 1.07
HSPG2-205ENST00000427897 ADH5P11766 374 aa21.74■■□□□ 1.07
HSPG2-205ENST00000427897 MTIF2P46199 727 aaKnown RBP21.74■■□□□ 1.07
HSPG2-205ENST00000427897 PLA2G4AP47712 749 aa21.74■■□□□ 1.07
HSPG2-205ENST00000427897 MARSP56192 900 aaKnown RBP21.74■■□□□ 1.07
HSPG2-205ENST00000427897 GAD2Q05329 585 aa21.74■■□□□ 1.07
HSPG2-205ENST00000427897 BST2Q10589 180 aaKnown RBP21.74■■□□□ 1.07
HSPG2-205ENST00000427897 RSRC2Q7L4I2 434 aaKnown RBP21.74■■□□□ 1.07
HSPG2-205ENST00000427897 CCDC186Q7Z3E2 898 aa21.74■■□□□ 1.07
HSPG2-205ENST00000427897 PIGZQ86VD9 579 aa21.74■■□□□ 1.07
HSPG2-205ENST00000427897 ZBTB44Q8NCP5 570 aa21.74■■□□□ 1.07
HSPG2-205ENST00000427897 UBA3Q8TBC4 463 aa21.74■■□□□ 1.07
HSPG2-205ENST00000427897 CNOT6LQ96LI5 555 aaKnown RBP21.74■■□□□ 1.07
HSPG2-205ENST00000427897 NCDNQ9UBB6 729 aa21.74■■□□□ 1.07
HSPG2-205ENST00000427897 NUDT5Q9UKK9 219 aa21.74■■□□□ 1.07
HSPG2-205ENST00000427897 CHURC1-FNTBB4DL54 471 aa21.73■■□□□ 1.07
HSPG2-205ENST00000427897 PAEPP09466 180 aa21.73■■□□□ 1.07
HSPG2-205ENST00000427897 FNTBP49356 437 aa21.73■■□□□ 1.07
HSPG2-205ENST00000427897 TKTL1P51854 596 aa21.73■■□□□ 1.07
HSPG2-205ENST00000427897 PDE4CQ08493 712 aa21.73■■□□□ 1.07
HSPG2-205ENST00000427897 ANO4Q32M45 955 aa21.73■■□□□ 1.07
HSPG2-205ENST00000427897 PREPLQ4J6C6 727 aaPredicted RBP21.73■■□□□ 1.07
HSPG2-205ENST00000427897 RPLP0P6Q8NHW5 317 aa21.73■■□□□ 1.07
HSPG2-205ENST00000427897 PNKPQ96T60 521 aa21.73■■□□□ 1.07
HSPG2-205ENST00000427897 NMUR1Q9HB89 426 aa21.73■■□□□ 1.07
HSPG2-205ENST00000427897 CYLDQ9NQC7 956 aa21.73■■□□□ 1.07
HSPG2-205ENST00000427897 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.73■■□□□ 1.07
HSPG2-205ENST00000427897 XPO1O14980 1071 aaKnown RBP21.72■■□□□ 1.07
HSPG2-205ENST00000427897 APODP05090 189 aa21.72■■□□□ 1.07
HSPG2-205ENST00000427897 KRT5P13647 590 aa21.72■■□□□ 1.07
HSPG2-205ENST00000427897 PGFP49763 221 aa21.72■■□□□ 1.07
HSPG2-205ENST00000427897 LY6G5CQ5SRR4 150 aa21.72■■□□□ 1.07
HSPG2-205ENST00000427897 NAIF1Q69YI7 327 aaPredicted RBP21.72■■□□□ 1.07
HSPG2-205ENST00000427897 RHBDF2Q6PJF5 856 aa21.72■■□□□ 1.07
HSPG2-205ENST00000427897 NUDT18Q6ZVK8 323 aa21.72■■□□□ 1.07
HSPG2-205ENST00000427897 TTC30AQ86WT1 665 aa21.72■■□□□ 1.07
HSPG2-205ENST00000427897 MIB1Q86YT6 1006 aa21.72■■□□□ 1.07
HSPG2-205ENST00000427897 FAM114A1Q8IWE2 563 aa21.72■■□□□ 1.07
HSPG2-205ENST00000427897 BBS7Q8IWZ6 715 aa21.72■■□□□ 1.07
HSPG2-205ENST00000427897 SIX6OS1Q8N1H7 587 aa21.72■■□□□ 1.07
HSPG2-205ENST00000427897 RUBCNQ92622 972 aa21.72■■□□□ 1.07
HSPG2-205ENST00000427897 ZFRQ96KR1 1074 aaKnown RBP21.72■■□□□ 1.07
HSPG2-205ENST00000427897 KLF16Q9BXK1 252 aaPredicted RBP21.72■■□□□ 1.07
HSPG2-205ENST00000427897 INTS2Q9H0H0 1204 aaKnown RBP21.72■■□□□ 1.07
HSPG2-205ENST00000427897 UBE2TQ9NPD8 197 aaPredicted RBP21.72■■□□□ 1.07
HSPG2-205ENST00000427897 OSER1Q9NX31 292 aa21.72■■□□□ 1.07
HSPG2-205ENST00000427897 CLIC5Q9NZA1 410 aa21.72■■□□□ 1.07
HSPG2-205ENST00000427897 RASAL2Q9UJF2 1139 aa21.72■■□□□ 1.07
HSPG2-205ENST00000427897 STRIP2Q9ULQ0 834 aa21.72■■□□□ 1.07
HSPG2-205ENST00000427897 USP3Q9Y6I4 520 aa21.72■■□□□ 1.07
HSPG2-205ENST00000427897 F5P12259 2224 aa21.71■■□□□ 1.07
HSPG2-205ENST00000427897 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.71■■□□□ 1.07
HSPG2-205ENST00000427897 ZBED1O96006 694 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms