RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 BEST1O76090 585 aa18.77■□□□□ 0.6
GPC1-203ENST00000425056 RHOBTB1O94844 696 aa18.77■□□□□ 0.6
GPC1-203ENST00000425056 APODP05090 189 aa18.77■□□□□ 0.6
GPC1-203ENST00000425056 NR2F2P24468 414 aa18.77■□□□□ 0.6
GPC1-203ENST00000425056 SLC6A11P48066 632 aa18.77■□□□□ 0.6
GPC1-203ENST00000425056 VAMP7P51809 220 aa18.77■□□□□ 0.6
GPC1-203ENST00000425056 ENPEPQ07075 957 aa18.77■□□□□ 0.6
GPC1-203ENST00000425056 DPYDQ12882 1025 aa18.77■□□□□ 0.6
GPC1-203ENST00000425056 LY6G5CQ5SRR4 150 aa18.77■□□□□ 0.6
GPC1-203ENST00000425056 C11orf74Q86VG3 221 aa18.77■□□□□ 0.6
GPC1-203ENST00000425056 PHTF2Q8N3S3 785 aa18.77■□□□□ 0.6
GPC1-203ENST00000425056 MDGA1Q8NFP4 955 aa18.77■□□□□ 0.6
GPC1-203ENST00000425056 CCDC47Q96A33 483 aaKnown RBP18.77■□□□□ 0.6
GPC1-203ENST00000425056 TPSD1Q9BZJ3 242 aa18.77■□□□□ 0.6
GPC1-203ENST00000425056 FBXO44Q9H4M3 255 aa18.77■□□□□ 0.6
GPC1-203ENST00000425056 FAM49BQ9NUQ9 324 aa18.77■□□□□ 0.6
GPC1-203ENST00000425056 SH3BP1Q9Y3L3 701 aa18.77■□□□□ 0.6
GPC1-203ENST00000425056 CNOT1A5YKK6 2376 aaKnown RBP18.77■□□□□ 0.6
GPC1-203ENST00000425056 ABCA7Q8IZY2 2146 aa18.76■□□□□ 0.59
GPC1-203ENST00000425056 THADAQ6YHU6 1953 aa18.76■□□□□ 0.59
GPC1-203ENST00000425056 HOXC11O43248 304 aaPredicted RBP18.76■□□□□ 0.59
GPC1-203ENST00000425056 FAM200BP0CF97 657 aa18.76■□□□□ 0.59
GPC1-203ENST00000425056 GRIA2P42262 883 aa18.76■□□□□ 0.59
GPC1-203ENST00000425056 KIR2DL1P43626 348 aaPredicted RBP18.76■□□□□ 0.59
GPC1-203ENST00000425056 MAP3K7CLP57077 242 aa18.76■□□□□ 0.59
GPC1-203ENST00000425056 GAD2Q05329 585 aa18.76■□□□□ 0.59
GPC1-203ENST00000425056 USP39Q53GS9 565 aaKnown RBP18.76■□□□□ 0.59
GPC1-203ENST00000425056 PMS2CLQ68D20 193 aa18.76■□□□□ 0.59
GPC1-203ENST00000425056 IL31Q6EBC2 164 aa18.76■□□□□ 0.59
GPC1-203ENST00000425056 ANO7Q6IWH7 933 aa18.76■□□□□ 0.59
GPC1-203ENST00000425056 INTS8Q75QN2 995 aaKnown RBP18.76■□□□□ 0.59
GPC1-203ENST00000425056 ETFBKMTQ8IXQ9 262 aa18.76■□□□□ 0.59
GPC1-203ENST00000425056 CCDC33Q8N5R6 958 aa18.76■□□□□ 0.59
GPC1-203ENST00000425056 C12orf29Q8N999 325 aa18.76■□□□□ 0.59
GPC1-203ENST00000425056 IL17RCQ8NAC3 791 aa18.76■□□□□ 0.59
GPC1-203ENST00000425056 IMPG2Q9BZV3 1241 aa18.76■□□□□ 0.59
GPC1-203ENST00000425056 SMOC1Q9H4F8 434 aa18.76■□□□□ 0.59
GPC1-203ENST00000425056 ARHGEF4Q9NR80 690 aa18.76■□□□□ 0.59
GPC1-203ENST00000425056 ACACBO00763 2458 aa18.75■□□□□ 0.59
GPC1-203ENST00000425056 A0A1W2PQ27 194 aa18.75■□□□□ 0.59
GPC1-203ENST00000425056 A0A1W2PQ64 194 aa18.75■□□□□ 0.59
GPC1-203ENST00000425056 A0A1W2PQD8 194 aa18.75■□□□□ 0.59
GPC1-203ENST00000425056 BCLAF3A2AJT9 711 aaKnown RBP18.75■□□□□ 0.59
GPC1-203ENST00000425056 TLR5O60602 858 aa18.75■□□□□ 0.59
GPC1-203ENST00000425056 TRIM49P0CI25 452 aa18.75■□□□□ 0.59
GPC1-203ENST00000425056 TRIM49CP0CI26 452 aa18.75■□□□□ 0.59
GPC1-203ENST00000425056 HNRNPLP14866 589 aaKnown RBP eCLIP18.75■□□□□ 0.59
GPC1-203ENST00000425056 TRIM21P19474 475 aaKnown RBP18.75■□□□□ 0.59
GPC1-203ENST00000425056 PGFP49763 221 aa18.75■□□□□ 0.59
GPC1-203ENST00000425056 KDSRQ06136 332 aa18.75■□□□□ 0.59
GPC1-203ENST00000425056 TMEM92Q6UXU6 159 aa18.75■□□□□ 0.59
GPC1-203ENST00000425056 CLEC20AQ6ZU45 233 aa18.75■□□□□ 0.59
GPC1-203ENST00000425056 GPRIN1Q7Z2K8 1008 aa18.75■□□□□ 0.59
GPC1-203ENST00000425056 BBS7Q8IWZ6 715 aa18.75■□□□□ 0.59
GPC1-203ENST00000425056 GUF1Q8N442 669 aaKnown RBP18.75■□□□□ 0.59
GPC1-203ENST00000425056 ALLCQ8N6M5 410 aa18.75■□□□□ 0.59
GPC1-203ENST00000425056 TXNDC5Q8NBS9 432 aaKnown RBP18.75■□□□□ 0.59
GPC1-203ENST00000425056 TAS1R2Q8TE23 839 aa18.75■□□□□ 0.59
GPC1-203ENST00000425056 TWNKQ96RR1 684 aa18.75■□□□□ 0.59
GPC1-203ENST00000425056 HNRNPABQ99729 332 aaKnown RBP18.75■□□□□ 0.59
GPC1-203ENST00000425056 CYP3A43Q9HB55 503 aa18.75■□□□□ 0.59
GPC1-203ENST00000425056 APOBEC3GQ9HC16 384 aaKnown RBP18.75■□□□□ 0.59
GPC1-203ENST00000425056 PNPLA8Q9NP80 782 aa18.75■□□□□ 0.59
GPC1-203ENST00000425056 CYLDQ9NQC7 956 aa18.75■□□□□ 0.59
GPC1-203ENST00000425056 TLR8Q9NR97 1041 aaKnown RBP18.75■□□□□ 0.59
GPC1-203ENST00000425056 MYO18AQ92614 2054 aaKnown RBP18.75■□□□□ 0.59
GPC1-203ENST00000425056 HHLA1C9JL84 531 aa18.74■□□□□ 0.59
GPC1-203ENST00000425056 TM4SF5O14894 197 aa18.74■□□□□ 0.59
GPC1-203ENST00000425056 KLF8O95600 359 aaPredicted RBP18.74■□□□□ 0.59
GPC1-203ENST00000425056 ADORA2BP29275 332 aa18.74■□□□□ 0.59
GPC1-203ENST00000425056 GBP1P32455 592 aa18.74■□□□□ 0.59
GPC1-203ENST00000425056 TIE1P35590 1138 aa18.74■□□□□ 0.59
GPC1-203ENST00000425056 TNFRSF4P43489 277 aa18.74■□□□□ 0.59
GPC1-203ENST00000425056 GCLMP48507 274 aa18.74■□□□□ 0.59
GPC1-203ENST00000425056 CREB5Q02930 508 aa18.74■□□□□ 0.59
GPC1-203ENST00000425056 PPP3CAQ08209 521 aa18.74■□□□□ 0.59
GPC1-203ENST00000425056 ZCWPW2Q504Y3 356 aa18.74■□□□□ 0.59
GPC1-203ENST00000425056 STPG1Q5TH74 334 aa18.74■□□□□ 0.59
GPC1-203ENST00000425056 KRBA2Q6ZNG9 492 aa18.74■□□□□ 0.59
GPC1-203ENST00000425056 FAM186BQ8IYM0 893 aa18.74■□□□□ 0.59
GPC1-203ENST00000425056 OLIG1Q8TAK6 271 aa18.74■□□□□ 0.59
GPC1-203ENST00000425056 WBP2Q969T9 261 aa18.74■□□□□ 0.59
GPC1-203ENST00000425056 CNTNAP3BQ96NU0 1288 aa18.74■□□□□ 0.59
GPC1-203ENST00000425056 NT5C1AQ9BXI3 368 aa18.74■□□□□ 0.59
GPC1-203ENST00000425056 CNTNAP3Q9BZ76 1288 aa18.74■□□□□ 0.59
GPC1-203ENST00000425056 NIF3L1Q9GZT8 377 aa18.74■□□□□ 0.59
GPC1-203ENST00000425056 SCAND2PQ9GZW5 306 aaPredicted RBP18.74■□□□□ 0.59
GPC1-203ENST00000425056 NACA2Q9H009 215 aa18.74■□□□□ 0.59
GPC1-203ENST00000425056 GOLPH3LQ9H4A5 285 aa18.74■□□□□ 0.59
GPC1-203ENST00000425056 SPHK2Q9NRA0 654 aa18.74■□□□□ 0.59
GPC1-203ENST00000425056 MAPK8IP1Q9UQF2 711 aa18.74■□□□□ 0.59
GPC1-203ENST00000425056 SCML2Q9UQR0 700 aa18.74■□□□□ 0.59
GPC1-203ENST00000425056 TNRC6BQ9UPQ9 1833 aaKnown RBP18.73■□□□□ 0.59
GPC1-203ENST00000425056 SGK1O00141 431 aa18.73■□□□□ 0.59
GPC1-203ENST00000425056 GREM1O60565 184 aa18.73■□□□□ 0.59
GPC1-203ENST00000425056 TULP3O75386 442 aa18.73■□□□□ 0.59
GPC1-203ENST00000425056 ALDH1A2O94788 518 aa18.73■□□□□ 0.59
GPC1-203ENST00000425056 IRF1P10914 325 aa18.73■□□□□ 0.59
GPC1-203ENST00000425056 KRT13P13646 458 aa18.73■□□□□ 0.59
GPC1-203ENST00000425056 BCKDHBP21953 392 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms