RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 PLEKHA7Q6IQ23 1121 aa14.1□□□□□ -0.15
PRPF39-202ENST00000424478 SCD5Q86SK9 330 aa14.1□□□□□ -0.15
PRPF39-202ENST00000424478 HSFY1Q96LI6 401 aa14.1□□□□□ -0.15
PRPF39-202ENST00000424478 GRID2IPA4D2P6 1211 aa14.1□□□□□ -0.15
PRPF39-202ENST00000424478 TRIM66O15016 1216 aa14.1□□□□□ -0.15
PRPF39-202ENST00000424478 CCDC85BQ15834 202 aaPredicted RBP14.1□□□□□ -0.15
PRPF39-202ENST00000424478 TAF12Q16514 161 aa14.1□□□□□ -0.15
PRPF39-202ENST00000424478 DCAF6Q58WW2 860 aa14.1□□□□□ -0.15
PRPF39-202ENST00000424478 STXBP5Q5T5C0 1151 aa14.1□□□□□ -0.15
PRPF39-202ENST00000424478 DNAJB7Q7Z6W7 309 aaPredicted RBP14.1□□□□□ -0.15
PRPF39-202ENST00000424478 DEFB106AQ8N104 65 aa14.1□□□□□ -0.15
PRPF39-202ENST00000424478 C3orf20Q8ND61 904 aa14.1□□□□□ -0.15
PRPF39-202ENST00000424478 PPM1EQ8WY54 764 aa14.1□□□□□ -0.15
PRPF39-202ENST00000424478 ZNF592Q92610 1267 aa14.1□□□□□ -0.15
PRPF39-202ENST00000424478 FBXO32Q969P5 355 aa14.1□□□□□ -0.15
PRPF39-202ENST00000424478 MCRS1Q96EZ8 462 aa14.1□□□□□ -0.15
PRPF39-202ENST00000424478 C8orf48Q96LL4 319 aa14.1□□□□□ -0.15
PRPF39-202ENST00000424478 MAGEB5Q9BZ81 275 aa14.1□□□□□ -0.15
PRPF39-202ENST00000424478 TMPRSS4Q9NRS4 437 aa14.1□□□□□ -0.15
PRPF39-202ENST00000424478 PJA2O43164 708 aa14.1□□□□□ -0.15
PRPF39-202ENST00000424478 KRT86O43790 486 aa14.1□□□□□ -0.15
PRPF39-202ENST00000424478 HMGA1P17096 107 aaKnown RBP14.1□□□□□ -0.15
PRPF39-202ENST00000424478 MAGEA11P43364 429 aa14.1□□□□□ -0.15
PRPF39-202ENST00000424478 CLUL1Q15846 466 aa14.1□□□□□ -0.15
PRPF39-202ENST00000424478 TCEAL8Q8IYN2 117 aa14.1□□□□□ -0.15
PRPF39-202ENST00000424478 SLC35F6Q8N357 371 aa14.1□□□□□ -0.15
PRPF39-202ENST00000424478 RXFP2Q8WXD0 754 aa14.1□□□□□ -0.15
PRPF39-202ENST00000424478 KCTD13Q8WZ19 329 aa14.1□□□□□ -0.15
PRPF39-202ENST00000424478 CORO1BQ9BR76 489 aa14.1□□□□□ -0.15
PRPF39-202ENST00000424478 ABCB6Q9NP58 842 aa14.1□□□□□ -0.15
PRPF39-202ENST00000424478 PARVAQ9NVD7 372 aa14.1□□□□□ -0.15
PRPF39-202ENST00000424478 KLHL11Q9NVR0 708 aa14.1□□□□□ -0.15
PRPF39-202ENST00000424478 MTCL1Q9Y4B5 1905 aaKnown RBP14.09□□□□□ -0.15
PRPF39-202ENST00000424478 NCAM1P13591 858 aa14.09□□□□□ -0.15
PRPF39-202ENST00000424478 SSR1P43307 286 aaKnown RBP14.09□□□□□ -0.15
PRPF39-202ENST00000424478 TUFMP49411 452 aaKnown RBP14.09□□□□□ -0.15
PRPF39-202ENST00000424478 GNG11P61952 73 aa14.09□□□□□ -0.15
PRPF39-202ENST00000424478 DLX2Q07687 328 aaPredicted RBP14.09□□□□□ -0.15
PRPF39-202ENST00000424478 PPP1R15BQ5SWA1 713 aa14.09□□□□□ -0.15
PRPF39-202ENST00000424478 BSPRYQ5W0U4 402 aa14.09□□□□□ -0.15
PRPF39-202ENST00000424478 DAAM2Q86T65 1068 aa14.09□□□□□ -0.15
PRPF39-202ENST00000424478 TPCN2Q8NHX9 752 aa14.09□□□□□ -0.15
PRPF39-202ENST00000424478 STK32AQ8WU08 396 aa14.09□□□□□ -0.15
PRPF39-202ENST00000424478 MRPL38Q96DV4 380 aaKnown RBP14.09□□□□□ -0.15
PRPF39-202ENST00000424478 CCSER2Q9H7U1 834 aa14.09□□□□□ -0.15
PRPF39-202ENST00000424478 LUC7LQ9NQ29 371 aaKnown RBP14.09□□□□□ -0.15
PRPF39-202ENST00000424478 SSX2IPQ9Y2D8 614 aa14.09□□□□□ -0.15
PRPF39-202ENST00000424478 NCANO14594 1321 aa14.09□□□□□ -0.15
PRPF39-202ENST00000424478 MSI1O43347 362 aaKnown RBP14.09□□□□□ -0.15
PRPF39-202ENST00000424478 GLP2RO95838 553 aa14.09□□□□□ -0.15
PRPF39-202ENST00000424478 LRG1P02750 347 aa14.09□□□□□ -0.15
PRPF39-202ENST00000424478 YWHAQP27348 245 aa14.09□□□□□ -0.15
PRPF39-202ENST00000424478 MARCKSL1P49006 195 aa14.09□□□□□ -0.15
PRPF39-202ENST00000424478 HYAL1Q12794 435 aa14.09□□□□□ -0.15
PRPF39-202ENST00000424478 ZNF512Q96ME7 567 aaPredicted RBP14.09□□□□□ -0.15
PRPF39-202ENST00000424478 SFMBT1Q9UHJ3 866 aa14.09□□□□□ -0.15
PRPF39-202ENST00000424478 TMEM59LQ9UK28 342 aa14.09□□□□□ -0.15
PRPF39-202ENST00000424478 CARNS1A5YM72 827 aa14.08□□□□□ -0.15
PRPF39-202ENST00000424478 PDGFRAP16234 1089 aa14.08□□□□□ -0.15
PRPF39-202ENST00000424478 CYP4F8P98187 520 aa14.08□□□□□ -0.15
PRPF39-202ENST00000424478 ZNF268Q14587 947 aaPredicted RBP14.08□□□□□ -0.15
PRPF39-202ENST00000424478 KCTD19Q17RG1 926 aaPredicted RBP14.08□□□□□ -0.15
PRPF39-202ENST00000424478 PPM1LQ5SGD2 360 aa14.08□□□□□ -0.15
PRPF39-202ENST00000424478 C10orf76Q5T2E6 689 aa14.08□□□□□ -0.15
PRPF39-202ENST00000424478 PRPF38BQ5VTL8 546 aaKnown RBP14.08□□□□□ -0.15
PRPF39-202ENST00000424478 TXNRD3NBQ6F5E7 133 aa14.08□□□□□ -0.15
PRPF39-202ENST00000424478 SYT10Q6XYQ8 523 aa14.08□□□□□ -0.15
PRPF39-202ENST00000424478 TCEAL4Q96EI5 215 aa14.08□□□□□ -0.15
PRPF39-202ENST00000424478 USP3Q9Y6I4 520 aa14.08□□□□□ -0.15
PRPF39-202ENST00000424478 TMEM191CA6NGB0 347 aa14.08□□□□□ -0.16
PRPF39-202ENST00000424478 MYL4P12829 197 aa14.08□□□□□ -0.16
PRPF39-202ENST00000424478 GGCXP38435 758 aa14.08□□□□□ -0.16
PRPF39-202ENST00000424478 CCR2P41597 374 aa14.08□□□□□ -0.16
PRPF39-202ENST00000424478 RPL34P49207 117 aaKnown RBP14.08□□□□□ -0.16
PRPF39-202ENST00000424478 RPL10AP62906 217 aaKnown RBP14.08□□□□□ -0.16
PRPF39-202ENST00000424478 NME3Q13232 169 aa14.08□□□□□ -0.16
PRPF39-202ENST00000424478 MSANTD4Q8NCY6 345 aa14.08□□□□□ -0.16
PRPF39-202ENST00000424478 CYP2S1Q96SQ9 504 aa14.08□□□□□ -0.16
PRPF39-202ENST00000424478 PCSK1NQ9UHG2 260 aa14.08□□□□□ -0.16
PRPF39-202ENST00000424478 STRIP2Q9ULQ0 834 aa14.08□□□□□ -0.16
PRPF39-202ENST00000424478 CCDC195A0A1B0GUA6 201 aa14.08□□□□□ -0.16
PRPF39-202ENST00000424478 C2orf78A6NCI8 922 aa14.08□□□□□ -0.16
PRPF39-202ENST00000424478 SIGLEC16A6NMB1 481 aa14.08□□□□□ -0.16
PRPF39-202ENST00000424478 CAPN9O14815 690 aa14.08□□□□□ -0.16
PRPF39-202ENST00000424478 TADA3O75528 432 aa14.08□□□□□ -0.16
PRPF39-202ENST00000424478 LTFP02788 710 aa14.08□□□□□ -0.16
PRPF39-202ENST00000424478 PSMA2P25787 234 aa14.08□□□□□ -0.16
PRPF39-202ENST00000424478 ACADSBP45954 432 aa14.08□□□□□ -0.16
PRPF39-202ENST00000424478 YWHAGP61981 247 aaKnown RBP eCLIP14.08□□□□□ -0.16
PRPF39-202ENST00000424478 YWHAZP63104 245 aaKnown RBP14.08□□□□□ -0.16
PRPF39-202ENST00000424478 ATP13A4Q4VNC1 1196 aa14.08□□□□□ -0.16
PRPF39-202ENST00000424478 ARFGAP1Q8N6T3 406 aa14.08□□□□□ -0.16
PRPF39-202ENST00000424478 ING5Q8WYH8 240 aa14.08□□□□□ -0.16
PRPF39-202ENST00000424478 SLC22A12Q96S37 553 aa14.08□□□□□ -0.16
PRPF39-202ENST00000424478 OXCT2Q9BYC2 517 aaPredicted RBP14.08□□□□□ -0.16
PRPF39-202ENST00000424478 A0A1W2PRU2 124 aa14.07□□□□□ -0.16
PRPF39-202ENST00000424478 CCP110O43303 1012 aa14.07□□□□□ -0.16
PRPF39-202ENST00000424478 HMBSP08397 361 aa14.07□□□□□ -0.16
PRPF39-202ENST00000424478 EPHB3P54753 998 aa14.07□□□□□ -0.16
PRPF39-202ENST00000424478 DUSP6Q16828 381 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms