RNA–Protein interactions for RNA: ENST00000424089.5

POLR1A-204, Transcript of RNA polymerase I subunit A, human

TSL 3

Gene POLR1A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR1A-204	ENST00000424089	SMAD2	Q15796	467 aa	Known RBP	10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	SV2C	Q496J9	727 aa		10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	TTMP	Q5BVD1	217 aa		10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	FBXO47	Q5MNV8	452 aa		10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	ZFYVE27	Q5T4F4	411 aa		10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	C6orf118	Q5T5N4	469 aa		10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	IER5L	Q5T953	404 aa		10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	CYP4A22	Q5TCH4	519 aa		10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	DENND2C	Q68D51	928 aa		10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	LIMS2	Q7Z4I7	341 aa		10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	TMEM110	Q86TL2	294 aa		10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	RELL1	Q8IUW5	271 aa		10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	SUGP1	Q8IWZ8	645 aa	Known RBP	10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	CMAS	Q8NFW8	434 aa	Predicted RBP	10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	NKD2	Q969F2	451 aa	Predicted RBP	10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	TOP1MT	Q969P6	601 aa		10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	PBXIP1	Q96AQ6	731 aa		10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	TNIP3	Q96KP6	325 aa		10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	ZMAT2	Q96NC0	199 aa	Known RBP	10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	CNPY3	Q9BT09	278 aa		10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	CAPS2	Q9BXY5	557 aa		10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	SLC4A5	Q9BY07	1137 aa		10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	ROPN1B	Q9BZX4	212 aa	Predicted RBP	10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	LMAN2L	Q9H0V9	348 aa		10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	ROPN1	Q9HAT0	212 aa	Predicted RBP	10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	CDHR5	Q9HBB8	845 aa		10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	CHST7	Q9NS84	486 aa		10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	SLC38A7	Q9NVC3	462 aa		10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	FAM86C1	Q9NVL1	165 aa		10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	ASIC3	Q9UHC3	531 aa		10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	TSPAN16	Q9UKR8	245 aa		10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	ATP8A1	Q9Y2Q0	1164 aa		10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	NEU2	Q9Y3R4	380 aa		10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	SNX9	Q9Y5X1	595 aa		10.51	□□□□□ -0.73
POLR1A-204	ENST00000424089	hCG_1818297	A0A087WSY0	165 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	KPNA7	A9QM74	516 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	GOLGA8S	H3BPF8	625 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	SMAP	O00193	183 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	DPYSL4	O14531	572 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	LIAS	O43766	372 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	CAND2	O75155	1236 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	LRCH4	O75427	683 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	RB1	P06400	928 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	ITGAV	P06756	1048 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	GPD1	P21695	349 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	IVD	P26440	423 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	LRPAP1	P30533	357 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	FLT3	P36888	993 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	ADCY8	P40145	1251 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	ACADSB	P45954	432 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	TAF6	P49848	677 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	GYS2	P54840	703 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	MRPS6	P82932	125 aa	Known RBP	10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	SLC25A11	Q02978	314 aa	Known RBP	10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	ADCY2	Q08462	1091 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	ZNF844	Q08AG5	666 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	BYSL	Q13895	437 aa	Known RBP	10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	MBTPS1	Q14703	1052 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	COL19A1	Q14993	1142 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	PKDCC	Q504Y2	493 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	BOLA3	Q53S33	107 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	PLEKHG4	Q58EX7	1191 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	UBXN11	Q5T124	520 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	RHBDF2	Q6PJF5	856 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	TRAF7	Q6Q0C0	670 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	MFSD7	Q6UXD7	560 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	BBS12	Q6ZW61	710 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	SERINC5	Q86VE9	423 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	MAP7D3	Q8IWC1	876 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	FIBCD1	Q8N539	461 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	TOP6BL	Q8N6T0	577 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	APBB2	Q92870	758 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	PPP2R3C	Q969Q6	453 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	RNF25	Q96BH1	459 aa	Predicted RBP	10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	ARL8A	Q96BM9	186 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	PGM2	Q96G03	612 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	HSFY1	Q96LI6	401 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	TBCB	Q99426	244 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	C11orf84	Q9BUA3	381 aa	Predicted RBP	10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	HEMGN	Q9BXL5	484 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	SNX25	Q9H3E2	840 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	RSAD1	Q9HA92	442 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	CWC15	Q9P013	229 aa	Known RBP	10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	HMGXB4	Q9UGU5	601 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	CYTH4	Q9UIA0	394 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	MUTYH	Q9UIF7	546 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	ANAPC5	Q9UJX4	755 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	TRPV2	Q9Y5S1	764 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	ATG2A	Q2TAZ0	1938 aa		10.5	□□□□□ -0.73
POLR1A-204	ENST00000424089	LRRD1	A4D1F6	860 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	C3orf70	A6NLC5	250 aa	Predicted RBP	10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	C2CD4B	A6NLJ0	364 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089		A8MXQ7	604 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	ZNF487	B1APH4	448 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	GPR182	O15218	404 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	MBTPS2	O43462	519 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	HUS1	O60921	280 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	TRUB2	O95900	331 aa	Known RBP	10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	NR1D1	P20393	614 aa		10.49	□□□□□ -0.73
POLR1A-204	ENST00000424089	WARS	P23381	471 aa	Known RBP	10.49	□□□□□ -0.73

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