RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.47□□□□□ -0.57
TNC-203ENST00000423613 PDGFRBP09619 1106 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 SCRN3Q0VDG4 424 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 ANKS6Q68DC2 871 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 PSMA8Q8TAA3 256 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 FAM192AQ9GZU8 254 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 JPH1Q9HDC5 661 aaPredicted RBP11.47□□□□□ -0.57
TNC-203ENST00000423613 RBM12Q9NTZ6 932 aaKnown RBP11.47□□□□□ -0.57
TNC-203ENST00000423613 ING4Q9UNL4 249 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 SCAF8Q9UPN6 1271 aaKnown RBP11.47□□□□□ -0.57
TNC-203ENST00000423613 BAIAP2Q9UQB8 552 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 CARD8Q9Y2G2 431 aa11.47□□□□□ -0.57
TNC-203ENST00000423613 GNB5O14775 395 aa11.46□□□□□ -0.57
TNC-203ENST00000423613 RAD51CO43502 376 aa11.46□□□□□ -0.57
TNC-203ENST00000423613 WEE2P0C1S8 567 aa11.46□□□□□ -0.57
TNC-203ENST00000423613 CETPP11597 493 aa11.46□□□□□ -0.57
TNC-203ENST00000423613 MZF1P28698 734 aaPredicted RBP11.46□□□□□ -0.57
TNC-203ENST00000423613 MCCD1P59942 119 aaPredicted RBP11.46□□□□□ -0.57
TNC-203ENST00000423613 DDR2Q16832 855 aa11.46□□□□□ -0.57
TNC-203ENST00000423613 WDR72Q3MJ13 1102 aa11.46□□□□□ -0.57
TNC-203ENST00000423613 MZT2BQ6NZ67 158 aa11.46□□□□□ -0.57
TNC-203ENST00000423613 TAF2Q6P1X5 1199 aa11.46□□□□□ -0.57
TNC-203ENST00000423613 SYDE1Q6ZW31 735 aaPredicted RBP11.46□□□□□ -0.57
TNC-203ENST00000423613 KCNB2Q92953 911 aa11.46□□□□□ -0.57
TNC-203ENST00000423613 REEP2Q9BRK0 252 aa11.46□□□□□ -0.57
TNC-203ENST00000423613 GGA3Q9NZ52 723 aa11.46□□□□□ -0.57
TNC-203ENST00000423613 CD274Q9NZQ7 290 aa11.46□□□□□ -0.57
TNC-203ENST00000423613 MLXQ9UH92 298 aa11.46□□□□□ -0.57
TNC-203ENST00000423613 PNMA8BQ9ULN7 279 aaPredicted RBP11.46□□□□□ -0.57
TNC-203ENST00000423613 NEU2Q9Y3R4 380 aa11.46□□□□□ -0.57
TNC-203ENST00000423613 DCDC2CA8MYV0 355 aa11.46□□□□□ -0.57
TNC-203ENST00000423613 RRM2P31350 389 aa11.46□□□□□ -0.57
TNC-203ENST00000423613 TUFMP49411 452 aaKnown RBP11.46□□□□□ -0.57
TNC-203ENST00000423613 LRRC74BQ6ZQY2 392 aa11.46□□□□□ -0.57
TNC-203ENST00000423613 SETD3Q86TU7 594 aaPredicted RBP11.46□□□□□ -0.57
TNC-203ENST00000423613 GIPC3Q8TF64 312 aa11.46□□□□□ -0.57
TNC-203ENST00000423613 C12orf4Q9NQ89 552 aa11.46□□□□□ -0.57
TNC-203ENST00000423613 VAV3Q9UKW4 847 aa11.46□□□□□ -0.57
TNC-203ENST00000423613 MYRFQ9Y2G1 1151 aa11.46□□□□□ -0.57
TNC-203ENST00000423613 NRKQ7Z2Y5 1582 aa11.46□□□□□ -0.57
TNC-203ENST00000423613 SYNCRIPO60506 623 aaKnown RBP11.46□□□□□ -0.57
TNC-203ENST00000423613 ETFBP38117 255 aa11.46□□□□□ -0.57
TNC-203ENST00000423613 ACOT2P49753 483 aa11.46□□□□□ -0.57
TNC-203ENST00000423613 EFNA5P52803 228 aa11.46□□□□□ -0.57
TNC-203ENST00000423613 TRAP1Q12931 704 aaKnown RBP11.46□□□□□ -0.57
TNC-203ENST00000423613 GNASQ5JWF2 1037 aa11.46□□□□□ -0.57
TNC-203ENST00000423613 TCHHL1Q5QJ38 904 aaPredicted RBP11.46□□□□□ -0.57
TNC-203ENST00000423613 ERICH5Q6P6B1 374 aa11.46□□□□□ -0.57
TNC-203ENST00000423613 MTDHQ86UE4 582 aaKnown RBP11.46□□□□□ -0.57
TNC-203ENST00000423613 C18orf8Q96DM3 657 aa11.46□□□□□ -0.57
TNC-203ENST00000423613 C7orf25Q9BPX7 421 aa11.46□□□□□ -0.57
TNC-203ENST00000423613 NFKBIZQ9BYH8 718 aa11.46□□□□□ -0.57
TNC-203ENST00000423613 TMEM117Q9H0C3 514 aa11.46□□□□□ -0.57
TNC-203ENST00000423613 ZNF609O15014 1411 aa11.46□□□□□ -0.58
TNC-203ENST00000423613 PNMA8CA0A1B0GUJ8 204 aa11.46□□□□□ -0.58
TNC-203ENST00000423613 FOXN3O00409 490 aaPredicted RBP11.46□□□□□ -0.58
TNC-203ENST00000423613 CCNCP24863 283 aa11.46□□□□□ -0.58
TNC-203ENST00000423613 GTF2H1P32780 548 aa11.46□□□□□ -0.58
TNC-203ENST00000423613 FXR1P51114 621 aaKnown RBP eCLIP11.46□□□□□ -0.58
TNC-203ENST00000423613 C1DQ13901 141 aaKnown RBP11.46□□□□□ -0.58
TNC-203ENST00000423613 PCSK7Q16549 785 aa11.46□□□□□ -0.58
TNC-203ENST00000423613 EFHC1Q5JVL4 640 aa11.46□□□□□ -0.58
TNC-203ENST00000423613 ERAP2Q6P179 960 aa11.46□□□□□ -0.58
TNC-203ENST00000423613 CDC73Q6P1J9 531 aa11.46□□□□□ -0.58
TNC-203ENST00000423613 NT5DC4Q86YG4 428 aa11.46□□□□□ -0.58
TNC-203ENST00000423613 SUGP1Q8IWZ8 645 aaKnown RBP11.46□□□□□ -0.58
TNC-203ENST00000423613 LSM14AQ8ND56 463 aaKnown RBP11.46□□□□□ -0.58
TNC-203ENST00000423613 NSUN4Q96CB9 384 aaKnown RBP11.46□□□□□ -0.58
TNC-203ENST00000423613 PABPC5Q96DU9 382 aaKnown RBP11.46□□□□□ -0.58
TNC-203ENST00000423613 AGAP3Q96P47 875 aa11.46□□□□□ -0.58
TNC-203ENST00000423613 RRN3Q9NYV6 651 aa11.46□□□□□ -0.58
TNC-203ENST00000423613 ITIH6Q6UXX5 1313 aa11.46□□□□□ -0.58
TNC-203ENST00000423613 CDH16O75309 829 aa11.46□□□□□ -0.58
TNC-203ENST00000423613 VIL1P09327 827 aaKnown RBP11.46□□□□□ -0.58
TNC-203ENST00000423613 MAGEA2P43356 314 aa11.46□□□□□ -0.58
TNC-203ENST00000423613 FMO5P49326 533 aa11.46□□□□□ -0.58
TNC-203ENST00000423613 RGS7P49802 495 aa11.46□□□□□ -0.58
TNC-203ENST00000423613 SUZ12Q15022 739 aaKnown RBP11.46□□□□□ -0.58
TNC-203ENST00000423613 TRIM74Q86UV6 250 aa11.46□□□□□ -0.58
TNC-203ENST00000423613 TRIM73Q86UV7 250 aa11.46□□□□□ -0.58
TNC-203ENST00000423613 ARID3BQ8IVW6 561 aaPredicted RBP11.46□□□□□ -0.58
TNC-203ENST00000423613 GALNT6Q8NCL4 622 aa11.46□□□□□ -0.58
TNC-203ENST00000423613 ZNF285Q96NJ3 590 aa11.46□□□□□ -0.58
TNC-203ENST00000423613 FAM118BQ9BPY3 351 aa11.46□□□□□ -0.58
TNC-203ENST00000423613 TSEN34Q9BSV6 310 aaKnown RBP11.46□□□□□ -0.58
TNC-203ENST00000423613 ING3Q9NXR8 418 aa11.46□□□□□ -0.58
TNC-203ENST00000423613 ZNRF3Q9ULT6 936 aa11.46□□□□□ -0.58
TNC-203ENST00000423613 AGAP1Q9UPQ3 857 aa11.46□□□□□ -0.58
TNC-203ENST00000423613 PKP3Q9Y446 797 aa11.46□□□□□ -0.58
TNC-203ENST00000423613 TSPOAP1O95153 1857 aa11.45□□□□□ -0.58
TNC-203ENST00000423613 UBOX5O94941 541 aa11.45□□□□□ -0.58
TNC-203ENST00000423613 DARSP14868 501 aaKnown RBP11.45□□□□□ -0.58
TNC-203ENST00000423613 HPCAP84074 193 aa11.45□□□□□ -0.58
TNC-203ENST00000423613 KRT78Q8N1N4 520 aa11.45□□□□□ -0.58
TNC-203ENST00000423613 FAM172AQ8WUF8 416 aa11.45□□□□□ -0.58
TNC-203ENST00000423613 PFDN2Q9UHV9 154 aa11.45□□□□□ -0.58
TNC-203ENST00000423613 UCHL3P15374 230 aa11.45□□□□□ -0.58
TNC-203ENST00000423613 MAPK9P45984 424 aa11.45□□□□□ -0.58
TNC-203ENST00000423613 HARS2P49590 506 aaKnown RBP11.45□□□□□ -0.58
TNC-203ENST00000423613 SLC34A1Q06495 639 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms