RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 ZDHHC11BP0C7U3 371 aa22.54■■□□□ 1.2
PTPN4-202ENST00000420482 ADH5P11766 374 aa22.54■■□□□ 1.2
PTPN4-202ENST00000420482 CD58P19256 250 aa22.54■■□□□ 1.2
PTPN4-202ENST00000420482 OPRD1P41143 372 aa22.54■■□□□ 1.2
PTPN4-202ENST00000420482 MXI1P50539 228 aa22.54■■□□□ 1.2
PTPN4-202ENST00000420482 ATXN1P54253 815 aaKnown RBP22.54■■□□□ 1.2
PTPN4-202ENST00000420482 GAD2Q05329 585 aa22.54■■□□□ 1.2
PTPN4-202ENST00000420482 ZNF658Q5TYW1 1059 aaPredicted RBP22.54■■□□□ 1.2
PTPN4-202ENST00000420482 TADA2BQ86TJ2 420 aa22.54■■□□□ 1.2
PTPN4-202ENST00000420482 FMR1NBQ8N0W7 255 aaPredicted RBP22.54■■□□□ 1.2
PTPN4-202ENST00000420482 FBXL13Q8NEE6 735 aa22.54■■□□□ 1.2
PTPN4-202ENST00000420482 ZMIZ2Q8NF64 920 aa22.54■■□□□ 1.2
PTPN4-202ENST00000420482 HHIPQ96QV1 700 aa22.54■■□□□ 1.2
PTPN4-202ENST00000420482 DUSP9Q99956 384 aaKnown RBP22.54■■□□□ 1.2
PTPN4-202ENST00000420482 RTKNQ9BST9 563 aa22.54■■□□□ 1.2
PTPN4-202ENST00000420482 FAM124BQ9H5Z6 455 aaPredicted RBP22.54■■□□□ 1.2
PTPN4-202ENST00000420482 CCSER2Q9H7U1 834 aa22.54■■□□□ 1.2
PTPN4-202ENST00000420482 EBF1Q9UH73 591 aa22.54■■□□□ 1.2
PTPN4-202ENST00000420482 CACNA1BQ00975 2339 aa22.54■■□□□ 1.2
PTPN4-202ENST00000420482 TLR5O60602 858 aa22.53■■□□□ 1.2
PTPN4-202ENST00000420482 CILPO75339 1184 aa22.53■■□□□ 1.2
PTPN4-202ENST00000420482 MRPS21P82921 87 aaKnown RBP22.53■■□□□ 1.2
PTPN4-202ENST00000420482 PNOCQ13519 176 aa22.53■■□□□ 1.2
PTPN4-202ENST00000420482 HSF5Q4G112 596 aaPredicted RBP22.53■■□□□ 1.2
PTPN4-202ENST00000420482 CLEC20AQ6ZU45 233 aa22.53■■□□□ 1.2
PTPN4-202ENST00000420482 C11orf74Q86VG3 221 aa22.53■■□□□ 1.2
PTPN4-202ENST00000420482 TSTD1Q8NFU3 115 aa22.53■■□□□ 1.2
PTPN4-202ENST00000420482 NETO1Q8TDF5 533 aa22.53■■□□□ 1.2
PTPN4-202ENST00000420482 USP33Q8TEY7 942 aa22.53■■□□□ 1.2
PTPN4-202ENST00000420482 APOBEC3GQ9HC16 384 aaKnown RBP22.53■■□□□ 1.2
PTPN4-202ENST00000420482 LSM7Q9UK45 103 aaKnown RBP22.53■■□□□ 1.2
PTPN4-202ENST00000420482 EPG5Q9HCE0 2579 aa22.52■■□□□ 1.2
PTPN4-202ENST00000420482 BEST1O76090 585 aa22.52■■□□□ 1.2
PTPN4-202ENST00000420482 ACO1P21399 889 aaKnown RBP22.52■■□□□ 1.2
PTPN4-202ENST00000420482 ATP5C1P36542 298 aaKnown RBP22.52■■□□□ 1.2
PTPN4-202ENST00000420482 PSEN1P49768 467 aa22.52■■□□□ 1.2
PTPN4-202ENST00000420482 SEC13P55735 322 aa22.52■■□□□ 1.2
PTPN4-202ENST00000420482 SLC8A3P57103 927 aa22.52■■□□□ 1.2
PTPN4-202ENST00000420482 FKBP3Q00688 224 aaKnown RBP22.52■■□□□ 1.2
PTPN4-202ENST00000420482 STIM1Q13586 685 aa22.52■■□□□ 1.2
PTPN4-202ENST00000420482 ELF2Q15723 593 aa22.52■■□□□ 1.2
PTPN4-202ENST00000420482 COBLL1Q53SF7 1204 aa22.52■■□□□ 1.2
PTPN4-202ENST00000420482 C2orf27AQ580R0 203 aa22.52■■□□□ 1.2
PTPN4-202ENST00000420482 RHBDF2Q6PJF5 856 aa22.52■■□□□ 1.2
PTPN4-202ENST00000420482 PRR23CQ6ZRP0 262 aa22.52■■□□□ 1.2
PTPN4-202ENST00000420482 SMYD4Q8IYR2 804 aaPredicted RBP22.52■■□□□ 1.2
PTPN4-202ENST00000420482 EZH1Q92800 747 aaPredicted RBP22.52■■□□□ 1.2
PTPN4-202ENST00000420482 SMARCE1Q969G3 411 aa22.52■■□□□ 1.2
PTPN4-202ENST00000420482 ARHGEF4Q9NR80 690 aa22.52■■□□□ 1.2
PTPN4-202ENST00000420482 RAB20Q9NX57 234 aa22.52■■□□□ 1.2
PTPN4-202ENST00000420482 SCML2Q9UQR0 700 aa22.52■■□□□ 1.2
PTPN4-202ENST00000420482 ACACBO00763 2458 aa22.52■■□□□ 1.2
PTPN4-202ENST00000420482 MYH10P35580 1976 aa22.51■■□□□ 1.19
PTPN4-202ENST00000420482 K7EQS6 105 aa22.51■■□□□ 1.19
PTPN4-202ENST00000420482 SCAMP3O14828 347 aaKnown RBP22.51■■□□□ 1.19
PTPN4-202ENST00000420482 SLC16A3O15427 465 aaKnown RBP22.51■■□□□ 1.19
PTPN4-202ENST00000420482 ALDH1A2O94788 518 aa22.51■■□□□ 1.19
PTPN4-202ENST00000420482 RHOBTB1O94844 696 aa22.51■■□□□ 1.19
PTPN4-202ENST00000420482 KAT7O95251 611 aa22.51■■□□□ 1.19
PTPN4-202ENST00000420482 GRIA2P42262 883 aa22.51■■□□□ 1.19
PTPN4-202ENST00000420482 DGKEP52429 567 aa22.51■■□□□ 1.19
PTPN4-202ENST00000420482 MCCD1P59942 119 aaPredicted RBP22.51■■□□□ 1.19
PTPN4-202ENST00000420482 USP39Q53GS9 565 aaKnown RBP22.51■■□□□ 1.19
PTPN4-202ENST00000420482 LY6G5CQ5SRR4 150 aa22.51■■□□□ 1.19
PTPN4-202ENST00000420482 TCERG1LQ5VWI1 586 aa22.51■■□□□ 1.19
PTPN4-202ENST00000420482 JAKMIP2Q96AA8 810 aa22.51■■□□□ 1.19
PTPN4-202ENST00000420482 ZC3H10Q96K80 434 aaKnown RBP22.51■■□□□ 1.19
PTPN4-202ENST00000420482 ZFRQ96KR1 1074 aaKnown RBP22.51■■□□□ 1.19
PTPN4-202ENST00000420482 TIGD1Q96MW7 591 aa22.51■■□□□ 1.19
PTPN4-202ENST00000420482 TWNKQ96RR1 684 aa22.51■■□□□ 1.19
PTPN4-202ENST00000420482 CDK5RAP1Q96SZ6 601 aaKnown RBP22.51■■□□□ 1.19
PTPN4-202ENST00000420482 CYLDQ9NQC7 956 aa22.51■■□□□ 1.19
PTPN4-202ENST00000420482 MMP17Q9ULZ9 603 aa22.51■■□□□ 1.19
PTPN4-202ENST00000420482 PCDHGA5Q9Y5G8 931 aa22.51■■□□□ 1.19
PTPN4-202ENST00000420482 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.51■■□□□ 1.19
PTPN4-202ENST00000420482 EML5Q05BV3 1969 aa22.5■■□□□ 1.19
PTPN4-202ENST00000420482 IRF1P10914 325 aa22.5■■□□□ 1.19
PTPN4-202ENST00000420482 PPP1R2P41236 205 aa22.5■■□□□ 1.19
PTPN4-202ENST00000420482 PRCPP42785 496 aa22.5■■□□□ 1.19
PTPN4-202ENST00000420482 TNFRSF4P43489 277 aa22.5■■□□□ 1.19
PTPN4-202ENST00000420482 LRRC63Q05C16 580 aa22.5■■□□□ 1.19
PTPN4-202ENST00000420482 GAB4Q2WGN9 574 aa22.5■■□□□ 1.19
PTPN4-202ENST00000420482 DCAF17Q5H9S7 520 aaPredicted RBP22.5■■□□□ 1.19
PTPN4-202ENST00000420482 KBTBD6Q86V97 674 aa22.5■■□□□ 1.19
PTPN4-202ENST00000420482 C12orf50Q8NA57 414 aaPredicted RBP22.5■■□□□ 1.19
PTPN4-202ENST00000420482 HEXIM2Q96MH2 286 aaKnown RBP22.5■■□□□ 1.19
PTPN4-202ENST00000420482 DUSP16Q9BY84 665 aa22.5■■□□□ 1.19
PTPN4-202ENST00000420482 SPHK2Q9NRA0 654 aa22.5■■□□□ 1.19
PTPN4-202ENST00000420482 EPN2O95208 641 aa22.49■■□□□ 1.19
PTPN4-202ENST00000420482 YWHAEP62258 255 aaKnown RBP22.49■■□□□ 1.19
PTPN4-202ENST00000420482 ANO4Q32M45 955 aa22.49■■□□□ 1.19
PTPN4-202ENST00000420482 ZNF394Q53GI3 561 aa22.49■■□□□ 1.19
PTPN4-202ENST00000420482 KLHDC10Q6PID8 442 aa22.49■■□□□ 1.19
PTPN4-202ENST00000420482 TRMT11Q7Z4G4 463 aaKnown RBP22.49■■□□□ 1.19
PTPN4-202ENST00000420482 EEF2KMTQ96G04 330 aa22.49■■□□□ 1.19
PTPN4-202ENST00000420482 ARRDC1-AS1Q9H2J1 176 aa22.49■■□□□ 1.19
PTPN4-202ENST00000420482 POLMQ9NP87 494 aaPredicted RBP22.49■■□□□ 1.19
PTPN4-202ENST00000420482 DEC1Q9P2X7 70 aa22.49■■□□□ 1.19
PTPN4-202ENST00000420482 DNMT3LQ9UJW3 386 aa22.49■■□□□ 1.19
PTPN4-202ENST00000420482 ATG2BQ96BY7 2078 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms