RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 CTNNBL1Q8WYA6 563 aaPredicted RBP13.95□□□□□ -0.18
CNN3-203ENST00000415017 RFFLQ8WZ73 363 aa13.95□□□□□ -0.18
CNN3-203ENST00000415017 ZNF653Q96CK0 615 aa13.95□□□□□ -0.18
CNN3-203ENST00000415017 CALR3Q96L12 384 aaKnown RBP13.95□□□□□ -0.18
CNN3-203ENST00000415017 SLC2A13Q96QE2 648 aa13.95□□□□□ -0.18
CNN3-203ENST00000415017 PRKD2Q9BZL6 878 aa13.95□□□□□ -0.18
CNN3-203ENST00000415017 DZANK1Q9NVP4 752 aa13.95□□□□□ -0.18
CNN3-203ENST00000415017 CLIC5Q9NZA1 410 aa13.95□□□□□ -0.18
CNN3-203ENST00000415017 DUSP10Q9Y6W6 482 aa13.95□□□□□ -0.18
CNN3-203ENST00000415017 HELZP42694 1942 aaKnown RBP13.95□□□□□ -0.18
CNN3-203ENST00000415017 PIK3R2O00459 728 aa13.94□□□□□ -0.18
CNN3-203ENST00000415017 NCK2O43639 380 aa13.94□□□□□ -0.18
CNN3-203ENST00000415017 TADA3O75528 432 aa13.94□□□□□ -0.18
CNN3-203ENST00000415017 RFPL2O75678 378 aa13.94□□□□□ -0.18
CNN3-203ENST00000415017 USP17L7P0C7H9 530 aa13.94□□□□□ -0.18
CNN3-203ENST00000415017 ABCB4P21439 1286 aa13.94□□□□□ -0.18
CNN3-203ENST00000415017 RFC1P35251 1148 aaPredicted RBP13.94□□□□□ -0.18
CNN3-203ENST00000415017 PSEN1P49768 467 aa13.94□□□□□ -0.18
CNN3-203ENST00000415017 YWHAZP63104 245 aaKnown RBP13.94□□□□□ -0.18
CNN3-203ENST00000415017 RBM10P98175 930 aaKnown RBP13.94□□□□□ -0.18
CNN3-203ENST00000415017 EIF4EBP2Q13542 120 aaPredicted RBP13.94□□□□□ -0.18
CNN3-203ENST00000415017 TAF5Q15542 800 aa13.94□□□□□ -0.18
CNN3-203ENST00000415017 PPM1LQ5SGD2 360 aa13.94□□□□□ -0.18
CNN3-203ENST00000415017 SIX6OS1Q8N1H7 587 aa13.94□□□□□ -0.18
CNN3-203ENST00000415017 RNF10Q8N5U6 811 aaKnown RBP13.94□□□□□ -0.18
CNN3-203ENST00000415017 STKLD1Q8NE28 680 aa13.94□□□□□ -0.18
CNN3-203ENST00000415017 SLC35G2Q8TBE7 412 aa13.94□□□□□ -0.18
CNN3-203ENST00000415017 GIPC2Q8TF65 315 aa13.94□□□□□ -0.18
CNN3-203ENST00000415017 CASP10Q92851 521 aa13.94□□□□□ -0.18
CNN3-203ENST00000415017 NMUR1Q9HB89 426 aa13.94□□□□□ -0.18
CNN3-203ENST00000415017 ZNF334Q9HCZ1 680 aaPredicted RBP13.94□□□□□ -0.18
CNN3-203ENST00000415017 MRPL47Q9HD33 250 aaKnown RBP13.94□□□□□ -0.18
CNN3-203ENST00000415017 SCINQ9Y6U3 715 aa13.94□□□□□ -0.18
CNN3-203ENST00000415017 C2CD4BA6NLJ0 364 aa13.93□□□□□ -0.18
CNN3-203ENST00000415017 USP27XA6NNY8 438 aa13.93□□□□□ -0.18
CNN3-203ENST00000415017 SOBPA7XYQ1 873 aa13.93□□□□□ -0.18
CNN3-203ENST00000415017 DPYSL4O14531 572 aa13.93□□□□□ -0.18
CNN3-203ENST00000415017 ZSCAN12O43309 604 aa13.93□□□□□ -0.18
CNN3-203ENST00000415017 ATMINO43313 823 aaPredicted RBP13.93□□□□□ -0.18
CNN3-203ENST00000415017 HSF2BPO75031 334 aa13.93□□□□□ -0.18
CNN3-203ENST00000415017 DAB1O75553 588 aa13.93□□□□□ -0.18
CNN3-203ENST00000415017 ENDOD1O94919 500 aa13.93□□□□□ -0.18
CNN3-203ENST00000415017 CSPG5O95196 566 aa13.93□□□□□ -0.18
CNN3-203ENST00000415017 LRG1P02750 347 aa13.93□□□□□ -0.18
CNN3-203ENST00000415017 LTFP02788 710 aa13.93□□□□□ -0.18
CNN3-203ENST00000415017 KRT3P12035 628 aa13.93□□□□□ -0.18
CNN3-203ENST00000415017 LTBRP36941 435 aa13.93□□□□□ -0.18
CNN3-203ENST00000415017 PPP3CCP48454 512 aa13.93□□□□□ -0.18
CNN3-203ENST00000415017 RPL7AP62424 266 aaKnown RBP13.93□□□□□ -0.18
CNN3-203ENST00000415017 ZNF252P-AS1Q0IIN9 211 aa13.93□□□□□ -0.18
CNN3-203ENST00000415017 KIF5AQ12840 1032 aa13.93□□□□□ -0.18
CNN3-203ENST00000415017 TAF10Q12962 218 aa13.93□□□□□ -0.18
CNN3-203ENST00000415017 VEPH1Q14D04 833 aa13.93□□□□□ -0.18
CNN3-203ENST00000415017 OR6B2Q6IFH4 312 aa13.93□□□□□ -0.18
CNN3-203ENST00000415017 SYCE2Q6PIF2 218 aa13.93□□□□□ -0.18
CNN3-203ENST00000415017 ELMSAN1Q6PJG2 1045 aa13.93□□□□□ -0.18
CNN3-203ENST00000415017 HFE2Q6ZVN8 426 aa13.93□□□□□ -0.18
CNN3-203ENST00000415017 NIPA2Q8N8Q9 360 aa13.93□□□□□ -0.18
CNN3-203ENST00000415017 PDZD8Q8NEN9 1154 aa13.93□□□□□ -0.18
CNN3-203ENST00000415017 JOSD2Q8TAC2 188 aa13.93□□□□□ -0.18
CNN3-203ENST00000415017 FEZF2Q8TBJ5 459 aa13.93□□□□□ -0.18
CNN3-203ENST00000415017 NDRG1Q92597 394 aaKnown RBP13.93□□□□□ -0.18
CNN3-203ENST00000415017 CENPIQ92674 756 aaPredicted RBP13.93□□□□□ -0.18
CNN3-203ENST00000415017 DDX23Q9BUQ8 820 aaKnown RBP13.93□□□□□ -0.18
CNN3-203ENST00000415017 NUP85Q9BW27 656 aa13.93□□□□□ -0.18
CNN3-203ENST00000415017 TSGA10Q9BZW7 698 aa13.93□□□□□ -0.18
CNN3-203ENST00000415017 SYNCQ9H7C4 482 aa13.93□□□□□ -0.18
CNN3-203ENST00000415017 SFXN1Q9H9B4 322 aa13.93□□□□□ -0.18
CNN3-203ENST00000415017 OSGEPQ9NPF4 335 aa13.93□□□□□ -0.18
CNN3-203ENST00000415017 OSER1Q9NX31 292 aa13.93□□□□□ -0.18
CNN3-203ENST00000415017 CLEC1BQ9P126 229 aa13.93□□□□□ -0.18
CNN3-203ENST00000415017 NUP210Q8TEM1 1887 aaPredicted RBP13.93□□□□□ -0.18
CNN3-203ENST00000415017 DOCK8Q8NF50 2099 aa13.92□□□□□ -0.18
CNN3-203ENST00000415017 FAM170AA1A519 330 aa13.92□□□□□ -0.18
CNN3-203ENST00000415017 ZNF840PA6NDX5 716 aa13.92□□□□□ -0.18
CNN3-203ENST00000415017 LINC01565O15544 149 aa13.92□□□□□ -0.18
CNN3-203ENST00000415017 MOSPD3O75425 235 aa13.92□□□□□ -0.18
CNN3-203ENST00000415017 OLFM2O95897 454 aa13.92□□□□□ -0.18
CNN3-203ENST00000415017 IGLV3-25P01717 112 aa13.92□□□□□ -0.18
CNN3-203ENST00000415017 HOXB8P17481 243 aaPredicted RBP13.92□□□□□ -0.18
CNN3-203ENST00000415017 PTPN2P17706 415 aa13.92□□□□□ -0.18
CNN3-203ENST00000415017 NOS2P35228 1153 aa13.92□□□□□ -0.18
CNN3-203ENST00000415017 FLT3P36888 993 aa13.92□□□□□ -0.18
CNN3-203ENST00000415017 PTPN9P43378 593 aa13.92□□□□□ -0.18
CNN3-203ENST00000415017 TUBP50607 506 aa13.92□□□□□ -0.18
CNN3-203ENST00000415017 YWHAGP61981 247 aaKnown RBP eCLIP13.92□□□□□ -0.18
CNN3-203ENST00000415017 OGDHQ02218 1023 aa13.92□□□□□ -0.18
CNN3-203ENST00000415017 PRSS36Q5K4E3 855 aa13.92□□□□□ -0.18
CNN3-203ENST00000415017 FAM102AQ5T9C2 384 aaPredicted RBP13.92□□□□□ -0.18
CNN3-203ENST00000415017 OTUD1Q5VV17 481 aaPredicted RBP13.92□□□□□ -0.18
CNN3-203ENST00000415017 BSPRYQ5W0U4 402 aa13.92□□□□□ -0.18
CNN3-203ENST00000415017 ANKRD54Q6NXT1 300 aa13.92□□□□□ -0.18
CNN3-203ENST00000415017 MSANTD2Q6P1R3 559 aa13.92□□□□□ -0.18
CNN3-203ENST00000415017 DNAJC24Q6P3W2 148 aa13.92□□□□□ -0.18
CNN3-203ENST00000415017 GAREM2Q75VX8 874 aa13.92□□□□□ -0.18
CNN3-203ENST00000415017 SLFN11Q7Z7L1 901 aa13.92□□□□□ -0.18
CNN3-203ENST00000415017 KIAA1328Q86T90 577 aa13.92□□□□□ -0.18
CNN3-203ENST00000415017 ARHGAP18Q8N392 663 aa13.92□□□□□ -0.18
CNN3-203ENST00000415017 LEMD2Q8NC56 503 aa13.92□□□□□ -0.18
CNN3-203ENST00000415017 TRIM44Q96DX7 344 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms