RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 WDR78Q5VTH9 848 aa16.54■□□□□ 0.24
HOXD3-202ENST00000410016 OLFML1Q6UWY5 402 aa16.54■□□□□ 0.24
HOXD3-202ENST00000410016 PCDH19Q8TAB3 1148 aa16.54■□□□□ 0.24
HOXD3-202ENST00000410016 NSMCE1Q8WV22 266 aa16.54■□□□□ 0.24
HOXD3-202ENST00000410016 RAB6BQ9NRW1 208 aa16.54■□□□□ 0.24
HOXD3-202ENST00000410016 OTOFQ9HC10 1997 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 SPDYE5A6NIY4 337 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 LPXNO60711 386 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 SPAG6O75602 509 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 GABBR2O75899 941 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 WFS1O76024 890 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 ELF1P32519 619 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 IREB2P48200 963 aaKnown RBP16.53■□□□□ 0.24
HOXD3-202ENST00000410016 MOB2Q70IA6 237 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 MTDHQ86UE4 582 aaKnown RBP16.53■□□□□ 0.24
HOXD3-202ENST00000410016 MAP7D3Q8IWC1 876 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 GIMAP7Q8NHV1 300 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 RFWD2Q8NHY2 731 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 TBC1D10AQ9BXI6 508 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 ALG13Q9NP73 1137 aaKnown RBP16.53■□□□□ 0.24
HOXD3-202ENST00000410016 GPATCH2LQ9NWQ4 482 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 NOP53Q9NZM5 478 aaKnown RBP16.53■□□□□ 0.24
HOXD3-202ENST00000410016 CNTN3Q9P232 1028 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 PAK5Q9P286 719 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 AKT3Q9Y243 479 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 DPYSL4O14531 572 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 KCNN4O15554 427 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 RBL1P28749 1068 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 RGS7P49802 495 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 YWHAZP63104 245 aaKnown RBP16.53■□□□□ 0.24
HOXD3-202ENST00000410016 OVGP1Q12889 678 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 KYAT1Q16773 422 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 CA9Q16790 459 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 PPP1R26Q5T8A7 1209 aaPredicted RBP16.53■□□□□ 0.24
HOXD3-202ENST00000410016 FYB2Q5VWT5 728 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 SLC9A4Q6AI14 798 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 MAMDC4Q6UXC1 1216 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 CLNKQ7Z7G1 428 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 CAND1Q86VP6 1230 aaKnown RBP16.53■□□□□ 0.24
HOXD3-202ENST00000410016 TTC30AQ86WT1 665 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 LRRC6Q86X45 466 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 CHSY1Q86X52 802 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 SULF1Q8IWU6 871 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 NLGN2Q8NFZ4 835 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 USP6NLQ92738 828 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 ACAP3Q96P50 834 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 MIS12Q9H081 205 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 CXCL16Q9H2A7 254 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 MROH8Q9H579 483 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 CXorf56Q9H5V9 222 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 PCDH18Q9HCL0 1135 aa16.53■□□□□ 0.24
HOXD3-202ENST00000410016 PCNTO95613 3336 aa16.52■□□□□ 0.24
HOXD3-202ENST00000410016 LOC102724159A0A0B4J2E5 919 aa16.52■□□□□ 0.24
HOXD3-202ENST00000410016 TSPAN1O60635 241 aa16.52■□□□□ 0.24
HOXD3-202ENST00000410016 FAM155BO75949 473 aa16.52■□□□□ 0.24
HOXD3-202ENST00000410016 DDNO94850 711 aaPredicted RBP16.52■□□□□ 0.24
HOXD3-202ENST00000410016 INHBAP08476 426 aa16.52■□□□□ 0.24
HOXD3-202ENST00000410016 PYGBP11216 843 aa16.52■□□□□ 0.24
HOXD3-202ENST00000410016 MAGEA6P43360 314 aa16.52■□□□□ 0.24
HOXD3-202ENST00000410016 GCLCP48506 637 aaPredicted RBP16.52■□□□□ 0.24
HOXD3-202ENST00000410016 YWHAGP61981 247 aaKnown RBP eCLIP16.52■□□□□ 0.24
HOXD3-202ENST00000410016 PWP2Q15269 919 aaKnown RBP16.52■□□□□ 0.24
HOXD3-202ENST00000410016 TAPT1Q6NXT6 567 aa16.52■□□□□ 0.24
HOXD3-202ENST00000410016 ZNF449Q6P9G9 518 aa16.52■□□□□ 0.24
HOXD3-202ENST00000410016 TMEM110Q86TL2 294 aa16.52■□□□□ 0.24
HOXD3-202ENST00000410016 TTC39CQ8N584 583 aa16.52■□□□□ 0.24
HOXD3-202ENST00000410016 GPATCH11Q8N954 259 aa16.52■□□□□ 0.24
HOXD3-202ENST00000410016 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.52■□□□□ 0.24
HOXD3-202ENST00000410016 SLC35F5Q8WV83 523 aa16.52■□□□□ 0.24
HOXD3-202ENST00000410016 TEKT4Q8WW24 435 aa16.52■□□□□ 0.24
HOXD3-202ENST00000410016 DCPSQ96C86 337 aaKnown RBP16.52■□□□□ 0.24
HOXD3-202ENST00000410016 APOPT1Q96IL0 206 aa16.52■□□□□ 0.24
HOXD3-202ENST00000410016 SLC4A5Q9BY07 1137 aa16.52■□□□□ 0.24
HOXD3-202ENST00000410016 KCNK13Q9HB14 408 aa16.52■□□□□ 0.24
HOXD3-202ENST00000410016 DCTN4Q9UJW0 460 aa16.52■□□□□ 0.24
HOXD3-202ENST00000410016 TTLL3Q9Y4R7 772 aa16.52■□□□□ 0.24
HOXD3-202ENST00000410016 NME7Q9Y5B8 376 aa16.52■□□□□ 0.24
HOXD3-202ENST00000410016 BCLAF3A2AJT9 711 aaKnown RBP16.52■□□□□ 0.23
HOXD3-202ENST00000410016 RPSAP08865 295 aaKnown RBP16.52■□□□□ 0.23
HOXD3-202ENST00000410016 TGM2P21980 687 aa16.52■□□□□ 0.23
HOXD3-202ENST00000410016 LAMC2Q13753 1193 aa16.52■□□□□ 0.23
HOXD3-202ENST00000410016 KRT81Q14533 505 aa16.52■□□□□ 0.23
HOXD3-202ENST00000410016 PRKD1Q15139 912 aaPredicted RBP16.52■□□□□ 0.23
HOXD3-202ENST00000410016 GOLGA7BQ2TAP0 167 aa16.52■□□□□ 0.23
HOXD3-202ENST00000410016 SCYL2Q6P3W7 929 aa16.52■□□□□ 0.23
HOXD3-202ENST00000410016 ARMCX2Q7L311 632 aa16.52■□□□□ 0.23
HOXD3-202ENST00000410016 SCUBE3Q8IX30 993 aa16.52■□□□□ 0.23
HOXD3-202ENST00000410016 FAM172AQ8WUF8 416 aa16.52■□□□□ 0.23
HOXD3-202ENST00000410016 N4BP2L2Q92802 583 aaPredicted RBP16.52■□□□□ 0.23
HOXD3-202ENST00000410016 FAM111AQ96PZ2 611 aa16.52■□□□□ 0.23
HOXD3-202ENST00000410016 SAR1AQ9NR31 198 aa16.52■□□□□ 0.23
HOXD3-202ENST00000410016 ZFP69BQ9UJL9 534 aa16.52■□□□□ 0.23
HOXD3-202ENST00000410016 HEY1Q9Y5J3 304 aa16.52■□□□□ 0.23
HOXD3-202ENST00000410016 IKBKGQ9Y6K9 419 aa16.52■□□□□ 0.23
HOXD3-202ENST00000410016 TROVE2P10155 538 aaKnown RBP eCLIP16.51■□□□□ 0.23
HOXD3-202ENST00000410016 GM2AP17900 193 aa16.51■□□□□ 0.23
HOXD3-202ENST00000410016 BCAR1P56945 870 aa16.51■□□□□ 0.23
HOXD3-202ENST00000410016 STILQ15468 1287 aa16.51■□□□□ 0.23
HOXD3-202ENST00000410016 SLC26A11Q86WA9 606 aa16.51■□□□□ 0.23
HOXD3-202ENST00000410016 NT5DC4Q86YG4 428 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms