RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 COPEO14579 308 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 PIM1P11309 404 aaPredicted RBP16.07■□□□□ 0.16
LIMS2-205ENST00000409455 RGS2P41220 211 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 TMPRSS15P98073 1019 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 XIAPP98170 497 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 KRT76Q01546 638 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 MTM1Q13496 603 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 WDR44Q5JSH3 913 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 MAP3K21Q5TCX8 1036 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 LRRC38Q5VT99 294 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 SATL1Q86VE3 508 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 PHF13Q86YI8 300 aaPredicted RBP16.07■□□□□ 0.16
LIMS2-205ENST00000409455 NAT8LQ8N9F0 302 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 MFSD14AQ96MC6 490 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 ACAP3Q96P50 834 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 KLHL4Q9C0H6 718 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 TBX20Q9UMR3 447 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 SOX13Q9UN79 622 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 TELO2Q9Y4R8 837 aa16.07■□□□□ 0.16
LIMS2-205ENST00000409455 DCAF8L1A6NGE4 600 aa16.06■□□□□ 0.16
LIMS2-205ENST00000409455 WDR64B1ANS9 1081 aa16.06■□□□□ 0.16
LIMS2-205ENST00000409455 TMCC1O94876 653 aa16.06■□□□□ 0.16
LIMS2-205ENST00000409455 ATP5BP06576 529 aaKnown RBP16.06■□□□□ 0.16
LIMS2-205ENST00000409455 FAM200BP0CF97 657 aa16.06■□□□□ 0.16
LIMS2-205ENST00000409455 PTPN7P35236 360 aa16.06■□□□□ 0.16
LIMS2-205ENST00000409455 ALDH18A1P54886 795 aaKnown RBP16.06■□□□□ 0.16
LIMS2-205ENST00000409455 ZNF200P98182 395 aaPredicted RBP16.06■□□□□ 0.16
LIMS2-205ENST00000409455 C1QBPQ07021 282 aaKnown RBP16.06■□□□□ 0.16
LIMS2-205ENST00000409455 SNAPC2Q13487 334 aa16.06■□□□□ 0.16
LIMS2-205ENST00000409455 STXBP2Q15833 593 aa16.06■□□□□ 0.16
LIMS2-205ENST00000409455 EFHC1Q5JVL4 640 aa16.06■□□□□ 0.16
LIMS2-205ENST00000409455 PPP1R2P3Q6NXS1 205 aa16.06■□□□□ 0.16
LIMS2-205ENST00000409455 GSTCDQ8NEC7 633 aa16.06■□□□□ 0.16
LIMS2-205ENST00000409455 POMGNT1Q8WZA1 660 aa16.06■□□□□ 0.16
LIMS2-205ENST00000409455 MPP4Q96JB8 637 aa16.06■□□□□ 0.16
LIMS2-205ENST00000409455 SRPK1Q96SB4 655 aaKnown RBP16.06■□□□□ 0.16
LIMS2-205ENST00000409455 GPRC5CQ9NQ84 441 aa16.06■□□□□ 0.16
LIMS2-205ENST00000409455 DNAAF2Q9NVR5 837 aaKnown RBP16.06■□□□□ 0.16
LIMS2-205ENST00000409455 TCEAL9Q9UHQ7 104 aa16.06■□□□□ 0.16
LIMS2-205ENST00000409455 TMEM150BA6NC51 233 aa16.06■□□□□ 0.16
LIMS2-205ENST00000409455 ARHGAP42A6NI28 874 aa16.06■□□□□ 0.16
LIMS2-205ENST00000409455 ATP9BO43861 1147 aa16.06■□□□□ 0.16
LIMS2-205ENST00000409455 JAK3P52333 1124 aa16.06■□□□□ 0.16
LIMS2-205ENST00000409455 USP46P62068 366 aa16.06■□□□□ 0.16
LIMS2-205ENST00000409455 FAAP100Q0VG06 881 aa16.06■□□□□ 0.16
LIMS2-205ENST00000409455 MMEL1Q495T6 779 aa16.06■□□□□ 0.16
LIMS2-205ENST00000409455 RBM12BQ8IXT5 1001 aaKnown RBP16.06■□□□□ 0.16
LIMS2-205ENST00000409455 ABRAQ8N0Z2 381 aa16.06■□□□□ 0.16
LIMS2-205ENST00000409455 PYDC1Q8WXC3 89 aa16.06■□□□□ 0.16
LIMS2-205ENST00000409455 NMD3Q96D46 503 aaKnown RBP16.06■□□□□ 0.16
LIMS2-205ENST00000409455 RILPQ96NA2 401 aa16.06■□□□□ 0.16
LIMS2-205ENST00000409455 EPB41L1Q9H4G0 881 aa16.06■□□□□ 0.16
LIMS2-205ENST00000409455 CHMP2BQ9UQN3 213 aa16.06■□□□□ 0.16
LIMS2-205ENST00000409455 GMEB1Q9Y692 573 aa16.06■□□□□ 0.16
LIMS2-205ENST00000409455 SPATA31C2B4DYI2 1134 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 STAM2O75886 525 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 VCLP18206 1134 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 OSBPP22059 807 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 GNA15P30679 374 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 YWHABP31946 246 aaKnown RBP16.05■□□□□ 0.16
LIMS2-205ENST00000409455 SFNP31947 248 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 GRIA2P42262 883 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 AQP5P55064 265 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 RPL7AP62424 266 aaKnown RBP16.05■□□□□ 0.16
LIMS2-205ENST00000409455 SP2Q02086 613 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 SP4Q02446 784 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 ITGA9Q13797 1035 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 MAP4K3Q8IVH8 894 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 SLC35B2Q8TB61 432 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 SLC44A1Q8WWI5 657 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 CCDC106Q9BWC9 280 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 PTTG2Q9NZH5 202 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 XPO7Q9UIA9 1087 aaKnown RBP16.05■□□□□ 0.16
LIMS2-205ENST00000409455 PPME1Q9Y570 386 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 PCDHA10Q9Y5I2 948 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 SOWAHBA6NEL2 793 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 PRR5-ARHGAP8B1AHC4 643 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 PFDN1O60925 122 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 LYPLA2O95372 231 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 ITGA2BP08514 1039 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 CFHP08603 1231 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 SSTR3P32745 418 aaPredicted RBP16.05■□□□□ 0.16
LIMS2-205ENST00000409455 CDKN2BP42772 138 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 PSMC5P62195 406 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 ARHGAP8P85298 464 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 BST1Q10588 318 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 SFT2D3Q587I9 215 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 FAM102BQ5T8I3 360 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 SH2D5Q6ZV89 423 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 C4orf19Q8IY42 314 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 RSAD2Q8WXG1 361 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 LZICQ8WZA0 190 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 E2F7Q96AV8 911 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 ACSF2Q96CM8 615 aaPredicted RBP16.05■□□□□ 0.16
LIMS2-205ENST00000409455 CDHR1Q96JP9 859 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 DDX56Q9NY93 547 aaKnown RBP16.05■□□□□ 0.16
LIMS2-205ENST00000409455 CLIC5Q9NZA1 410 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 LOC285556D6RIA3 1793 aa16.05■□□□□ 0.16
LIMS2-205ENST00000409455 TCRBV9S1A1TA0A576 114 aa16.04■□□□□ 0.16
LIMS2-205ENST00000409455 HNRNPRO43390 633 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms