RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 TCHHL1Q5QJ38 904 aaPredicted RBP23.17■■□□□ 1.3
CUEDC1-202ENST00000407144 MCOLN2Q8IZK6 566 aa23.17■■□□□ 1.3
CUEDC1-202ENST00000407144 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.17■■□□□ 1.3
CUEDC1-202ENST00000407144 GBA3Q9H227 469 aa23.17■■□□□ 1.3
CUEDC1-202ENST00000407144 PARVGQ9HBI0 331 aa23.17■■□□□ 1.3
CUEDC1-202ENST00000407144 K7EPI3 171 aa23.17■■□□□ 1.3
CUEDC1-202ENST00000407144 ADRA2BP18089 450 aa23.17■■□□□ 1.3
CUEDC1-202ENST00000407144 EIF2B2P49770 351 aaKnown RBP23.17■■□□□ 1.3
CUEDC1-202ENST00000407144 SLC5A3P53794 718 aa23.17■■□□□ 1.3
CUEDC1-202ENST00000407144 CDKL1Q00532 357 aa23.17■■□□□ 1.3
CUEDC1-202ENST00000407144 PPP3CAQ08209 521 aa23.17■■□□□ 1.3
CUEDC1-202ENST00000407144 FAAP100Q0VG06 881 aa23.17■■□□□ 1.3
CUEDC1-202ENST00000407144 ZBTB17Q13105 803 aa23.17■■□□□ 1.3
CUEDC1-202ENST00000407144 WDR75Q8IWA0 830 aaKnown RBP23.17■■□□□ 1.3
CUEDC1-202ENST00000407144 FBXO36Q8NEA4 188 aa23.17■■□□□ 1.3
CUEDC1-202ENST00000407144 HM13Q8TCT9 377 aa23.17■■□□□ 1.3
CUEDC1-202ENST00000407144 TMEM174Q8WUU8 243 aa23.17■■□□□ 1.3
CUEDC1-202ENST00000407144 NLRP7Q8WX94 980 aa23.17■■□□□ 1.3
CUEDC1-202ENST00000407144 NKD2Q969F2 451 aaPredicted RBP23.17■■□□□ 1.3
CUEDC1-202ENST00000407144 FIZ1Q96SL8 496 aa23.17■■□□□ 1.3
CUEDC1-202ENST00000407144 ARPC5LQ9BPX5 153 aa23.17■■□□□ 1.3
CUEDC1-202ENST00000407144 EBF4Q9BQW3 602 aa23.17■■□□□ 1.3
CUEDC1-202ENST00000407144 TMEM117Q9H0C3 514 aa23.17■■□□□ 1.3
CUEDC1-202ENST00000407144 XPOTO43592 962 aaKnown RBP23.16■■□□□ 1.3
CUEDC1-202ENST00000407144 INHBBP09529 407 aa23.16■■□□□ 1.3
CUEDC1-202ENST00000407144 POLD1P28340 1107 aa23.16■■□□□ 1.3
CUEDC1-202ENST00000407144 VAMP7P51809 220 aa23.16■■□□□ 1.3
CUEDC1-202ENST00000407144 NFX1Q12986 1120 aaKnown RBP23.16■■□□□ 1.3
CUEDC1-202ENST00000407144 CES4AQ5XG92 561 aa23.16■■□□□ 1.3
CUEDC1-202ENST00000407144 DENND5BQ6ZUT9 1274 aa23.16■■□□□ 1.3
CUEDC1-202ENST00000407144 ARCQ7LC44 396 aa23.16■■□□□ 1.3
CUEDC1-202ENST00000407144 NUDCD3Q8IVD9 361 aa23.16■■□□□ 1.3
CUEDC1-202ENST00000407144 CSRNP1Q96S65 589 aa23.16■■□□□ 1.3
CUEDC1-202ENST00000407144 WDR83Q9BRX9 315 aaKnown RBP23.16■■□□□ 1.3
CUEDC1-202ENST00000407144 TPK1Q9H3S4 243 aa23.16■■□□□ 1.3
CUEDC1-202ENST00000407144 HIPK3Q9H422 1215 aa23.16■■□□□ 1.3
CUEDC1-202ENST00000407144 PSTPIP2Q9H939 334 aa23.16■■□□□ 1.3
CUEDC1-202ENST00000407144 TRNAU1APQ9NX07 287 aaKnown RBP23.16■■□□□ 1.3
CUEDC1-202ENST00000407144 BCAP29Q9UHQ4 241 aa23.16■■□□□ 1.3
CUEDC1-202ENST00000407144 CCPG1Q9ULG6 757 aa23.16■■□□□ 1.3
CUEDC1-202ENST00000407144 INHBAP08476 426 aa23.16■■□□□ 1.3
CUEDC1-202ENST00000407144 KITP10721 976 aa23.16■■□□□ 1.3
CUEDC1-202ENST00000407144 KCNQ4P56696 695 aa23.16■■□□□ 1.3
CUEDC1-202ENST00000407144 FNBP1LQ5T0N5 605 aa23.16■■□□□ 1.3
CUEDC1-202ENST00000407144 ITPRIPL1Q6GPH6 555 aa23.16■■□□□ 1.3
CUEDC1-202ENST00000407144 C16orf86Q6ZW13 317 aa23.16■■□□□ 1.3
CUEDC1-202ENST00000407144 RCOR2Q8IZ40 523 aa23.16■■□□□ 1.3
CUEDC1-202ENST00000407144 FAM96AQ9H5X1 160 aa23.16■■□□□ 1.3
CUEDC1-202ENST00000407144 THAP1Q9NVV9 213 aa23.16■■□□□ 1.3
CUEDC1-202ENST00000407144 STK39Q9UEW8 545 aa23.16■■□□□ 1.3
CUEDC1-202ENST00000407144 APOBEC2Q9Y235 224 aaKnown RBP23.16■■□□□ 1.3
CUEDC1-202ENST00000407144 ZHX2Q9Y6X8 837 aa23.16■■□□□ 1.3
CUEDC1-202ENST00000407144 SFI1A8K8P3 1242 aa23.15■■□□□ 1.3
CUEDC1-202ENST00000407144 H3BNH8 94 aa23.15■■□□□ 1.3
CUEDC1-202ENST00000407144 SULT1C4O75897 302 aa23.15■■□□□ 1.3
CUEDC1-202ENST00000407144 KRT38O76015 456 aa23.15■■□□□ 1.3
CUEDC1-202ENST00000407144 CDK8P49336 464 aa23.15■■□□□ 1.3
CUEDC1-202ENST00000407144 DLG4P78352 724 aa23.15■■□□□ 1.3
CUEDC1-202ENST00000407144 MSS51Q4VC12 460 aa23.15■■□□□ 1.3
CUEDC1-202ENST00000407144 NAT8LQ8N9F0 302 aa23.15■■□□□ 1.3
CUEDC1-202ENST00000407144 ISOC1Q96CN7 298 aa23.15■■□□□ 1.3
CUEDC1-202ENST00000407144 ZNFX1Q9P2E3 1918 aaKnown RBP23.14■■□□□ 1.3
CUEDC1-202ENST00000407144 FRMPD2Q68DX3 1309 aaPredicted RBP23.14■■□□□ 1.3
CUEDC1-202ENST00000407144 NAV1Q8NEY1 1877 aa23.14■■□□□ 1.3
CUEDC1-202ENST00000407144 ZBTB11O95625 1053 aaPredicted RBP23.14■■□□□ 1.3
CUEDC1-202ENST00000407144 SNHG28P0DPA3 235 aa23.14■■□□□ 1.3
CUEDC1-202ENST00000407144 TAS2R40P59535 323 aa23.14■■□□□ 1.3
CUEDC1-202ENST00000407144 CDHR3Q6ZTQ4 885 aa23.14■■□□□ 1.3
CUEDC1-202ENST00000407144 FASTKD5Q7L8L6 764 aaKnown RBP23.14■■□□□ 1.3
CUEDC1-202ENST00000407144 RHPN2Q8IUC4 686 aa23.14■■□□□ 1.3
CUEDC1-202ENST00000407144 TRIM56Q9BRZ2 755 aaKnown RBP23.14■■□□□ 1.3
CUEDC1-202ENST00000407144 MECRQ9BV79 373 aa23.14■■□□□ 1.3
CUEDC1-202ENST00000407144 GCOM2Q9BZD3 368 aaPredicted RBP23.14■■□□□ 1.3
CUEDC1-202ENST00000407144 DRC3Q9H069 523 aa23.14■■□□□ 1.3
CUEDC1-202ENST00000407144 DHX33Q9H6R0 707 aaKnown RBP23.14■■□□□ 1.3
CUEDC1-202ENST00000407144 CYP4F11Q9HBI6 524 aa23.14■■□□□ 1.3
CUEDC1-202ENST00000407144 MARCOQ9UEW3 520 aaPredicted RBP23.14■■□□□ 1.3
CUEDC1-202ENST00000407144 MYRFQ9Y2G1 1151 aa23.14■■□□□ 1.3
CUEDC1-202ENST00000407144 PPP1R11O60927 126 aaPredicted RBP23.14■■□□□ 1.29
CUEDC1-202ENST00000407144 SIN3BO75182 1162 aa23.14■■□□□ 1.29
CUEDC1-202ENST00000407144 UNGP13051 313 aaPredicted RBP23.14■■□□□ 1.29
CUEDC1-202ENST00000407144 PTPN2P17706 415 aa23.14■■□□□ 1.29
CUEDC1-202ENST00000407144 STAT2P52630 851 aa23.14■■□□□ 1.29
CUEDC1-202ENST00000407144 NDUFA5Q16718 116 aa23.14■■□□□ 1.29
CUEDC1-202ENST00000407144 PARP10Q53GL7 1025 aa23.14■■□□□ 1.29
CUEDC1-202ENST00000407144 DCAF6Q58WW2 860 aa23.14■■□□□ 1.29
CUEDC1-202ENST00000407144 TTC39BQ5VTQ0 682 aaPredicted RBP23.14■■□□□ 1.29
CUEDC1-202ENST00000407144 C1orf186Q6ZWK4 172 aa23.14■■□□□ 1.29
CUEDC1-202ENST00000407144 HSPH1Q92598 858 aa23.14■■□□□ 1.29
CUEDC1-202ENST00000407144 CAMKK2Q96RR4 588 aa23.14■■□□□ 1.29
CUEDC1-202ENST00000407144 JMJD4Q9H9V9 463 aa23.14■■□□□ 1.29
CUEDC1-202ENST00000407144 PRPF19Q9UMS4 504 aaKnown RBP23.14■■□□□ 1.29
CUEDC1-202ENST00000407144 ARHGAP26Q9UNA1 814 aa23.14■■□□□ 1.29
CUEDC1-202ENST00000407144 B3GNT3Q9Y2A9 372 aa23.14■■□□□ 1.29
CUEDC1-202ENST00000407144 ZBTB1Q9Y2K1 713 aa23.14■■□□□ 1.29
CUEDC1-202ENST00000407144 RNF11Q9Y3C5 154 aa23.14■■□□□ 1.29
CUEDC1-202ENST00000407144 LY75O60449 1722 aa23.13■■□□□ 1.29
CUEDC1-202ENST00000407144 WTIPA6NIX2 430 aaPredicted RBP23.13■■□□□ 1.29
CUEDC1-202ENST00000407144 BAG6P46379 1132 aa23.13■■□□□ 1.29
CUEDC1-202ENST00000407144 STX3Q13277 289 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms