RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 CCDC125Q86Z20 511 aa12.38□□□□□ -0.43
PCNX4-204ENST00000406949 C18orf25Q96B23 403 aaPredicted RBP12.38□□□□□ -0.43
PCNX4-204ENST00000406949 MRPL45Q9BRJ2 306 aaKnown RBP12.38□□□□□ -0.43
PCNX4-204ENST00000406949 YY1AP1Q9H869 796 aa12.38□□□□□ -0.43
PCNX4-204ENST00000406949 CYP3A43Q9HB55 503 aa12.38□□□□□ -0.43
PCNX4-204ENST00000406949 LRRC4Q9HBW1 653 aa12.38□□□□□ -0.43
PCNX4-204ENST00000406949 NR2E3Q9Y5X4 410 aa12.38□□□□□ -0.43
PCNX4-204ENST00000406949 LOXHD1Q8IVV2 1947 aa12.38□□□□□ -0.43
PCNX4-204ENST00000406949 ZWINTO95229 277 aa12.38□□□□□ -0.43
PCNX4-204ENST00000406949 C22orf31O95567 290 aa12.38□□□□□ -0.43
PCNX4-204ENST00000406949 GRM1Q13255 1194 aa12.38□□□□□ -0.43
PCNX4-204ENST00000406949 BOLA3Q53S33 107 aa12.38□□□□□ -0.43
PCNX4-204ENST00000406949 TAF1BQ53T94 588 aaPredicted RBP12.38□□□□□ -0.43
PCNX4-204ENST00000406949 TWF2Q6IBS0 349 aaKnown RBP12.38□□□□□ -0.43
PCNX4-204ENST00000406949 LRRC6Q86X45 466 aa12.38□□□□□ -0.43
PCNX4-204ENST00000406949 ARMC2Q8NEN0 867 aa12.38□□□□□ -0.43
PCNX4-204ENST00000406949 AGAP3Q96P47 875 aa12.38□□□□□ -0.43
PCNX4-204ENST00000406949 LHX5Q9H2C1 402 aa12.38□□□□□ -0.43
PCNX4-204ENST00000406949 CNTN6Q9UQ52 1028 aa12.38□□□□□ -0.43
PCNX4-204ENST00000406949 HCRTO43612 131 aa12.37□□□□□ -0.43
PCNX4-204ENST00000406949 EDNRBP24530 442 aa12.37□□□□□ -0.43
PCNX4-204ENST00000406949 CPA2P48052 419 aa12.37□□□□□ -0.43
PCNX4-204ENST00000406949 ATXN1P54253 815 aaKnown RBP12.37□□□□□ -0.43
PCNX4-204ENST00000406949 DCAF6Q58WW2 860 aa12.37□□□□□ -0.43
PCNX4-204ENST00000406949 PMF1Q6P1K2 205 aa12.37□□□□□ -0.43
PCNX4-204ENST00000406949 SNRNP25Q9BV90 132 aaKnown RBP12.37□□□□□ -0.43
PCNX4-204ENST00000406949 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.37□□□□□ -0.43
PCNX4-204ENST00000406949 NOP53Q9NZM5 478 aaKnown RBP12.37□□□□□ -0.43
PCNX4-204ENST00000406949 A0A0G2JLL6 359 aaPredicted RBP12.37□□□□□ -0.43
PCNX4-204ENST00000406949 PPEF2O14830 753 aa12.37□□□□□ -0.43
PCNX4-204ENST00000406949 HAUS5O94927 633 aa12.37□□□□□ -0.43
PCNX4-204ENST00000406949 RARBP10826 455 aa12.37□□□□□ -0.43
PCNX4-204ENST00000406949 CYP2C9P11712 490 aa12.37□□□□□ -0.43
PCNX4-204ENST00000406949 ATICP31939 592 aa12.37□□□□□ -0.43
PCNX4-204ENST00000406949 PCK1P35558 622 aa12.37□□□□□ -0.43
PCNX4-204ENST00000406949 GPX6P59796 221 aa12.37□□□□□ -0.43
PCNX4-204ENST00000406949 C9orf131Q5VYM1 1079 aa12.37□□□□□ -0.43
PCNX4-204ENST00000406949 DENND5BQ6ZUT9 1274 aa12.37□□□□□ -0.43
PCNX4-204ENST00000406949 PRRT2Q7Z6L0 340 aaPredicted RBP12.37□□□□□ -0.43
PCNX4-204ENST00000406949 LONP2Q86WA8 852 aa12.37□□□□□ -0.43
PCNX4-204ENST00000406949 SIX6OS1Q8N1H7 587 aa12.37□□□□□ -0.43
PCNX4-204ENST00000406949 CCDC134Q9H6E4 229 aa12.37□□□□□ -0.43
PCNX4-204ENST00000406949 PPARGC1AQ9UBK2 798 aaKnown RBP12.37□□□□□ -0.43
PCNX4-204ENST00000406949 TUBGCP4Q9UGJ1 667 aa12.37□□□□□ -0.43
PCNX4-204ENST00000406949 ACTL7BQ9Y614 415 aa12.37□□□□□ -0.43
PCNX4-204ENST00000406949 CCL15-CCL14A0A0B4J2E2 113 aa12.37□□□□□ -0.43
PCNX4-204ENST00000406949 TCRBV9S1A1TA0A576 114 aa12.37□□□□□ -0.43
PCNX4-204ENST00000406949 CCDC78A2IDD5 438 aa12.37□□□□□ -0.43
PCNX4-204ENST00000406949 HUS1O60921 280 aa12.37□□□□□ -0.43
PCNX4-204ENST00000406949 CYP2F1P24903 491 aa12.37□□□□□ -0.43
PCNX4-204ENST00000406949 GPD2P43304 727 aa12.37□□□□□ -0.43
PCNX4-204ENST00000406949 CRADDP78560 199 aa12.37□□□□□ -0.43
PCNX4-204ENST00000406949 CCL15Q16663 113 aa12.37□□□□□ -0.43
PCNX4-204ENST00000406949 ILDR2Q71H61 639 aa12.37□□□□□ -0.43
PCNX4-204ENST00000406949 AGAP11Q8TF27 550 aa12.37□□□□□ -0.43
PCNX4-204ENST00000406949 PEBP4Q96S96 227 aa12.37□□□□□ -0.43
PCNX4-204ENST00000406949 HEY2Q9UBP5 337 aa12.37□□□□□ -0.43
PCNX4-204ENST00000406949 ITGA11Q9UKX5 1188 aa12.37□□□□□ -0.43
PCNX4-204ENST00000406949 ASMTLO95671 621 aa12.36□□□□□ -0.43
PCNX4-204ENST00000406949 ESRRAP11474 423 aaPredicted RBP12.36□□□□□ -0.43
PCNX4-204ENST00000406949 ACAT1P24752 427 aaKnown RBP12.36□□□□□ -0.43
PCNX4-204ENST00000406949 GNL1P36915 607 aaPredicted RBP12.36□□□□□ -0.43
PCNX4-204ENST00000406949 PDK4Q16654 411 aa12.36□□□□□ -0.43
PCNX4-204ENST00000406949 PRAMEF19Q5SWL8 479 aa12.36□□□□□ -0.43
PCNX4-204ENST00000406949 ARFGAP1Q8N6T3 406 aa12.36□□□□□ -0.43
PCNX4-204ENST00000406949 DNAAF3Q8N9W5 541 aa12.36□□□□□ -0.43
PCNX4-204ENST00000406949 NDRG1Q92597 394 aaKnown RBP12.36□□□□□ -0.43
PCNX4-204ENST00000406949 STMN2Q93045 179 aa12.36□□□□□ -0.43
PCNX4-204ENST00000406949 RNF157Q96PX1 679 aa12.36□□□□□ -0.43
PCNX4-204ENST00000406949 ACSS3Q9H6R3 686 aa12.36□□□□□ -0.43
PCNX4-204ENST00000406949 IFT122Q9HBG6 1241 aa12.36□□□□□ -0.43
PCNX4-204ENST00000406949 RABGEF1Q9UJ41 708 aa12.36□□□□□ -0.43
PCNX4-204ENST00000406949 CLUHO75153 1309 aa12.36□□□□□ -0.43
PCNX4-204ENST00000406949 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.36□□□□□ -0.43
PCNX4-204ENST00000406949 ZBTB42B2RXF5 422 aa12.36□□□□□ -0.43
PCNX4-204ENST00000406949 KRT38O76015 456 aa12.36□□□□□ -0.43
PCNX4-204ENST00000406949 MYL3P08590 195 aa12.36□□□□□ -0.43
PCNX4-204ENST00000406949 SULT1E1P49888 294 aa12.36□□□□□ -0.43
PCNX4-204ENST00000406949 DRICH1Q6PGQ1 229 aaPredicted RBP12.36□□□□□ -0.43
PCNX4-204ENST00000406949 OTOAQ7RTW8 1153 aa12.36□□□□□ -0.43
PCNX4-204ENST00000406949 RPAINQ86UA6 219 aa12.36□□□□□ -0.43
PCNX4-204ENST00000406949 NUDCD3Q8IVD9 361 aa12.36□□□□□ -0.43
PCNX4-204ENST00000406949 CDKL3Q8IVW4 592 aaPredicted RBP12.36□□□□□ -0.43
PCNX4-204ENST00000406949 NDUFAF2Q8N183 169 aa12.36□□□□□ -0.43
PCNX4-204ENST00000406949 GOLGA2P5Q9HBQ8 144 aa12.36□□□□□ -0.43
PCNX4-204ENST00000406949 SLC12A4Q9UP95 1085 aa12.36□□□□□ -0.43
PCNX4-204ENST00000406949 AP4E1Q9UPM8 1137 aa12.36□□□□□ -0.43
PCNX4-204ENST00000406949 PPME1Q9Y570 386 aa12.36□□□□□ -0.43
PCNX4-204ENST00000406949 SPDYE5A6NIY4 337 aa12.36□□□□□ -0.43
PCNX4-204ENST00000406949 PDHXO00330 501 aa12.36□□□□□ -0.43
PCNX4-204ENST00000406949 GYG2O15488 501 aa12.36□□□□□ -0.43
PCNX4-204ENST00000406949 AMPD1P23109 780 aa12.36□□□□□ -0.43
PCNX4-204ENST00000406949 CA9Q16790 459 aa12.36□□□□□ -0.43
PCNX4-204ENST00000406949 CLEC4CQ8WTT0 213 aa12.36□□□□□ -0.43
PCNX4-204ENST00000406949 NSMCE1Q8WV22 266 aa12.36□□□□□ -0.43
PCNX4-204ENST00000406949 TRIM56Q9BRZ2 755 aaKnown RBP12.36□□□□□ -0.43
PCNX4-204ENST00000406949 NXF3Q9H4D5 531 aaKnown RBP12.36□□□□□ -0.43
PCNX4-204ENST00000406949 A0A1B0GUA9 196 aa12.35□□□□□ -0.43
PCNX4-204ENST00000406949 C2orf71A6NGG8 1288 aa12.35□□□□□ -0.43
PCNX4-204ENST00000406949 LGR5O75473 907 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms