RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 USP13Q92995 863 aaPredicted RBP18.06■□□□□ 0.48
PTCHD3P3-201ENST00000403073 ELSPBP1Q96BH3 223 aa18.06■□□□□ 0.48
PTCHD3P3-201ENST00000403073 LRRC3BQ96PB8 259 aa18.06■□□□□ 0.48
PTCHD3P3-201ENST00000403073 CPXM1Q96SM3 734 aa18.06■□□□□ 0.48
PTCHD3P3-201ENST00000403073 PCDHB18PQ96TA0 734 aa18.06■□□□□ 0.48
PTCHD3P3-201ENST00000403073 AGPAT1Q99943 283 aa18.06■□□□□ 0.48
PTCHD3P3-201ENST00000403073 SMOC2Q9H3U7 446 aa18.06■□□□□ 0.48
PTCHD3P3-201ENST00000403073 CNGB3Q9NQW8 809 aa18.06■□□□□ 0.48
PTCHD3P3-201ENST00000403073 AIPL1Q9NZN9 384 aa18.06■□□□□ 0.48
PTCHD3P3-201ENST00000403073 MUTYHQ9UIF7 546 aa18.06■□□□□ 0.48
PTCHD3P3-201ENST00000403073 ZMYM5Q9UJ78 669 aa18.06■□□□□ 0.48
PTCHD3P3-201ENST00000403073 NUDT5Q9UKK9 219 aa18.06■□□□□ 0.48
PTCHD3P3-201ENST00000403073 LUC7L2Q9Y383 392 aaKnown RBP18.06■□□□□ 0.48
PTCHD3P3-201ENST00000403073 CEP83Q9Y592 693 aa18.06■□□□□ 0.48
PTCHD3P3-201ENST00000403073 TCF20Q9UGU0 1960 aaKnown RBP18.06■□□□□ 0.48
PTCHD3P3-201ENST00000403073 DOCK6Q96HP0 2047 aa18.05■□□□□ 0.48
PTCHD3P3-201ENST00000403073 YJEFN3A6XGL0 299 aa18.05■□□□□ 0.48
PTCHD3P3-201ENST00000403073 HEPACAM2A8MVW5 462 aa18.05■□□□□ 0.48
PTCHD3P3-201ENST00000403073 E7ENQ6 273 aa18.05■□□□□ 0.48
PTCHD3P3-201ENST00000403073 COCHO43405 550 aa18.05■□□□□ 0.48
PTCHD3P3-201ENST00000403073 SKILP12757 684 aa18.05■□□□□ 0.48
PTCHD3P3-201ENST00000403073 RARGP13631 454 aa18.05■□□□□ 0.48
PTCHD3P3-201ENST00000403073 CDH5P33151 784 aaPredicted RBP18.05■□□□□ 0.48
PTCHD3P3-201ENST00000403073 ACADSBP45954 432 aa18.05■□□□□ 0.48
PTCHD3P3-201ENST00000403073 ZBED6P86452 979 aa18.05■□□□□ 0.48
PTCHD3P3-201ENST00000403073 NAA35Q5VZE5 725 aa18.05■□□□□ 0.48
PTCHD3P3-201ENST00000403073 HFE2Q6ZVN8 426 aa18.05■□□□□ 0.48
PTCHD3P3-201ENST00000403073 SCML4Q8N228 414 aa18.05■□□□□ 0.48
PTCHD3P3-201ENST00000403073 ZNF397Q8NF99 534 aaPredicted RBP18.05■□□□□ 0.48
PTCHD3P3-201ENST00000403073 KHSRPQ92945 711 aaKnown RBP eCLIP18.05■□□□□ 0.48
PTCHD3P3-201ENST00000403073 NXPE3Q969Y0 559 aa18.05■□□□□ 0.48
PTCHD3P3-201ENST00000403073 IQCDQ96DY2 449 aa18.05■□□□□ 0.48
PTCHD3P3-201ENST00000403073 NOX5Q96PH1 765 aa18.05■□□□□ 0.48
PTCHD3P3-201ENST00000403073 TDP1Q9NUW8 608 aa18.05■□□□□ 0.48
PTCHD3P3-201ENST00000403073 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.05■□□□□ 0.48
PTCHD3P3-201ENST00000403073 DPYSL4O14531 572 aa18.04■□□□□ 0.48
PTCHD3P3-201ENST00000403073 PAPSS1O43252 624 aaPredicted RBP18.04■□□□□ 0.48
PTCHD3P3-201ENST00000403073 TLR5O60602 858 aa18.04■□□□□ 0.48
PTCHD3P3-201ENST00000403073 FBXO21O94952 628 aa18.04■□□□□ 0.48
PTCHD3P3-201ENST00000403073 LSM8O95777 96 aaKnown RBP18.04■□□□□ 0.48
PTCHD3P3-201ENST00000403073 OLFM2O95897 454 aa18.04■□□□□ 0.48
PTCHD3P3-201ENST00000403073 CYP1A1P04798 512 aaPredicted RBP18.04■□□□□ 0.48
PTCHD3P3-201ENST00000403073 MBL2P11226 248 aaPredicted RBP18.04■□□□□ 0.48
PTCHD3P3-201ENST00000403073 PFKLP17858 780 aa18.04■□□□□ 0.48
PTCHD3P3-201ENST00000403073 PSEN1P49768 467 aa18.04■□□□□ 0.48
PTCHD3P3-201ENST00000403073 TUBP50607 506 aa18.04■□□□□ 0.48
PTCHD3P3-201ENST00000403073 ZNF75DP51815 510 aa18.04■□□□□ 0.48
PTCHD3P3-201ENST00000403073 TDGQ13569 410 aa18.04■□□□□ 0.48
PTCHD3P3-201ENST00000403073 GRM2Q14416 872 aa18.04■□□□□ 0.48
PTCHD3P3-201ENST00000403073 PTPN20Q4JDL3 420 aa18.04■□□□□ 0.48
PTCHD3P3-201ENST00000403073 BSPRYQ5W0U4 402 aa18.04■□□□□ 0.48
PTCHD3P3-201ENST00000403073 VITQ6UXI7 678 aa18.04■□□□□ 0.48
PTCHD3P3-201ENST00000403073 FMNL3Q8IVF7 1028 aa18.04■□□□□ 0.48
PTCHD3P3-201ENST00000403073 ARHGAP18Q8N392 663 aa18.04■□□□□ 0.48
PTCHD3P3-201ENST00000403073 CELF5Q8N6W0 485 aaKnown RBP18.04■□□□□ 0.48
PTCHD3P3-201ENST00000403073 TTC16Q8NEE8 873 aa18.04■□□□□ 0.48
PTCHD3P3-201ENST00000403073 NACA2Q9H009 215 aa18.04■□□□□ 0.48
PTCHD3P3-201ENST00000403073 HAUS4Q9H6D7 363 aa18.04■□□□□ 0.48
PTCHD3P3-201ENST00000403073 CYLDQ9NQC7 956 aa18.04■□□□□ 0.48
PTCHD3P3-201ENST00000403073 SEPT11Q9NVA2 429 aaKnown RBP18.04■□□□□ 0.48
PTCHD3P3-201ENST00000403073 SMPD4Q9NXE4 827 aa18.04■□□□□ 0.48
PTCHD3P3-201ENST00000403073 CLIC5Q9NZA1 410 aa18.04■□□□□ 0.48
PTCHD3P3-201ENST00000403073 MDM4O15151 490 aa18.03■□□□□ 0.48
PTCHD3P3-201ENST00000403073 NARSO43776 548 aaKnown RBP18.03■□□□□ 0.48
PTCHD3P3-201ENST00000403073 ERBB2P04626 1255 aa18.03■□□□□ 0.48
PTCHD3P3-201ENST00000403073 RALAP11233 206 aa18.03■□□□□ 0.48
PTCHD3P3-201ENST00000403073 NOMO3P69849 1222 aa18.03■□□□□ 0.48
PTCHD3P3-201ENST00000403073 SLC7A9P82251 487 aa18.03■□□□□ 0.48
PTCHD3P3-201ENST00000403073 ZXDBP98169 803 aa18.03■□□□□ 0.48
PTCHD3P3-201ENST00000403073 GOLGA8FQ08AF8 430 aa18.03■□□□□ 0.48
PTCHD3P3-201ENST00000403073 GOLGA8DPQ0D2H9 430 aa18.03■□□□□ 0.48
PTCHD3P3-201ENST00000403073 KLHL30Q0D2K2 578 aa18.03■□□□□ 0.48
PTCHD3P3-201ENST00000403073 C2CD6Q53TS8 623 aa18.03■□□□□ 0.48
PTCHD3P3-201ENST00000403073 C10orf120Q5SQS8 335 aa18.03■□□□□ 0.48
PTCHD3P3-201ENST00000403073 BTBD8Q5XKL5 378 aa18.03■□□□□ 0.48
PTCHD3P3-201ENST00000403073 TMC6Q7Z403 805 aa18.03■□□□□ 0.48
PTCHD3P3-201ENST00000403073 ERICH1Q86X53 443 aa18.03■□□□□ 0.48
PTCHD3P3-201ENST00000403073 SLC30A5Q8TAD4 765 aa18.03■□□□□ 0.48
PTCHD3P3-201ENST00000403073 RIN3Q8TB24 985 aa18.03■□□□□ 0.48
PTCHD3P3-201ENST00000403073 IRGQQ8WZA9 623 aa18.03■□□□□ 0.48
PTCHD3P3-201ENST00000403073 EDEM1Q92611 657 aa18.03■□□□□ 0.48
PTCHD3P3-201ENST00000403073 E2F7Q96AV8 911 aa18.03■□□□□ 0.48
PTCHD3P3-201ENST00000403073 NUCKS1Q9H1E3 243 aaKnown RBP18.03■□□□□ 0.48
PTCHD3P3-201ENST00000403073 SYNCQ9H7C4 482 aa18.03■□□□□ 0.48
PTCHD3P3-201ENST00000403073 ARHGAP26Q9UNA1 814 aa18.03■□□□□ 0.48
PTCHD3P3-201ENST00000403073 SORCS3Q9UPU3 1222 aa18.03■□□□□ 0.48
PTCHD3P3-201ENST00000403073 CPQQ9Y646 472 aa18.03■□□□□ 0.48
PTCHD3P3-201ENST00000403073 UNGP13051 313 aaPredicted RBP18.02■□□□□ 0.48
PTCHD3P3-201ENST00000403073 TNFAIP3P21580 790 aa18.02■□□□□ 0.48
PTCHD3P3-201ENST00000403073 ATP5C1P36542 298 aaKnown RBP18.02■□□□□ 0.48
PTCHD3P3-201ENST00000403073 PRKCIP41743 596 aa18.02■□□□□ 0.48
PTCHD3P3-201ENST00000403073 GPC5P78333 572 aa18.02■□□□□ 0.48
PTCHD3P3-201ENST00000403073 ZNF268Q14587 947 aaPredicted RBP18.02■□□□□ 0.48
PTCHD3P3-201ENST00000403073 CLEC16AQ2KHT3 1053 aa18.02■□□□□ 0.48
PTCHD3P3-201ENST00000403073 OR6B2Q6IFH4 312 aa18.02■□□□□ 0.48
PTCHD3P3-201ENST00000403073 TRIM72Q6ZMU5 477 aa18.02■□□□□ 0.48
PTCHD3P3-201ENST00000403073 ZNF571Q7Z3V5 609 aaPredicted RBP18.02■□□□□ 0.48
PTCHD3P3-201ENST00000403073 MFSD6LQ8IWD5 586 aa18.02■□□□□ 0.48
PTCHD3P3-201ENST00000403073 BPIFB1Q8TDL5 484 aa18.02■□□□□ 0.48
PTCHD3P3-201ENST00000403073 SH3RF2Q8TEC5 729 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms