RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 ABHD11Q8NFV4 315 aa4.94□□□□□ -1.62
CMC1-202ENST00000396610 RSPRY1Q96DX4 576 aa4.94□□□□□ -1.62
CMC1-202ENST00000396610 LENG8Q96PV6 779 aaPredicted RBP4.94□□□□□ -1.62
CMC1-202ENST00000396610 HIST1H2AAQ96QV6 131 aa4.94□□□□□ -1.62
CMC1-202ENST00000396610 LPAR3Q9UBY5 353 aa4.94□□□□□ -1.62
CMC1-202ENST00000396610 FAM234BA2RU67 622 aa4.93□□□□□ -1.62
CMC1-202ENST00000396610 EXOC5O00471 708 aa4.93□□□□□ -1.62
CMC1-202ENST00000396610 CES2O00748 559 aa4.93□□□□□ -1.62
CMC1-202ENST00000396610 SPRY2O43597 315 aa4.93□□□□□ -1.62
CMC1-202ENST00000396610 PMPCBO75439 489 aa4.93□□□□□ -1.62
CMC1-202ENST00000396610 DLDP09622 509 aaKnown RBP4.93□□□□□ -1.62
CMC1-202ENST00000396610 FAM163BP0C2L3 166 aa4.93□□□□□ -1.62
CMC1-202ENST00000396610 HSPA7P48741 367 aa4.93□□□□□ -1.62
CMC1-202ENST00000396610 SUMO2P61956 95 aaKnown RBP4.93□□□□□ -1.62
CMC1-202ENST00000396610 GPS1Q13098 491 aa4.93□□□□□ -1.62
CMC1-202ENST00000396610 MPEG1Q2M385 716 aa4.93□□□□□ -1.62
CMC1-202ENST00000396610 L1TD1Q5T7N2 865 aaKnown RBP4.93□□□□□ -1.62
CMC1-202ENST00000396610 CEP85Q6P2H3 762 aa4.93□□□□□ -1.62
CMC1-202ENST00000396610 KIRREL2Q6UWL6 708 aa4.93□□□□□ -1.62
CMC1-202ENST00000396610 CLEC9AQ6UXN8 241 aa4.93□□□□□ -1.62
CMC1-202ENST00000396610 CCDC28AQ8IWP9 274 aa4.93□□□□□ -1.62
CMC1-202ENST00000396610 DEPTORQ8TB45 409 aa4.93□□□□□ -1.62
CMC1-202ENST00000396610 BRI3BPQ8WY22 251 aa4.93□□□□□ -1.62
CMC1-202ENST00000396610 REPS1Q96D71 796 aa4.93□□□□□ -1.62
CMC1-202ENST00000396610 FAM227BQ96M60 508 aa4.93□□□□□ -1.62
CMC1-202ENST00000396610 GDF15Q99988 308 aa4.93□□□□□ -1.62
CMC1-202ENST00000396610 THAP7Q9BT49 309 aaPredicted RBP4.93□□□□□ -1.62
CMC1-202ENST00000396610 ZNF700Q9H0M5 742 aa4.93□□□□□ -1.62
CMC1-202ENST00000396610 NLRC4Q9NPP4 1024 aa4.93□□□□□ -1.62
CMC1-202ENST00000396610 SH3BP4Q9P0V3 963 aa4.93□□□□□ -1.62
CMC1-202ENST00000396610 SLC27A6Q9Y2P4 619 aa4.93□□□□□ -1.62
CMC1-202ENST00000396610 POLR2AP24928 1970 aaKnown RBP4.93□□□□□ -1.62
CMC1-202ENST00000396610 PODXLO00592 558 aa4.92□□□□□ -1.62
CMC1-202ENST00000396610 SNX2O60749 519 aa4.92□□□□□ -1.62
CMC1-202ENST00000396610 EEF1GP26641 437 aaKnown RBP4.92□□□□□ -1.62
CMC1-202ENST00000396610 MCM5P33992 734 aa4.92□□□□□ -1.62
CMC1-202ENST00000396610 ELLP55199 621 aaPredicted RBP4.92□□□□□ -1.62
CMC1-202ENST00000396610 SOX10P56693 466 aa4.92□□□□□ -1.62
CMC1-202ENST00000396610 HDAC1Q13547 482 aaPredicted RBP4.92□□□□□ -1.62
CMC1-202ENST00000396610 RNASE12Q5GAN4 147 aaKnown RBP4.92□□□□□ -1.62
CMC1-202ENST00000396610 FAXCQ5TGI0 409 aa4.92□□□□□ -1.62
CMC1-202ENST00000396610 RAP1GAP2Q684P5 730 aa4.92□□□□□ -1.62
CMC1-202ENST00000396610 ABLIM2Q6H8Q1 611 aa4.92□□□□□ -1.62
CMC1-202ENST00000396610 KIAA0408Q6ZU52 694 aa4.92□□□□□ -1.62
CMC1-202ENST00000396610 PTCHD4Q6ZW05 846 aa4.92□□□□□ -1.62
CMC1-202ENST00000396610 MORC1Q86VD1 984 aa4.92□□□□□ -1.62
CMC1-202ENST00000396610 DNAJC10Q8IXB1 793 aa4.92□□□□□ -1.62
CMC1-202ENST00000396610 SIRT6Q8N6T7 355 aa4.92□□□□□ -1.62
CMC1-202ENST00000396610 GLIS1Q8NBF1 620 aa4.92□□□□□ -1.62
CMC1-202ENST00000396610 CCDC150Q8NCX0 1101 aa4.92□□□□□ -1.62
CMC1-202ENST00000396610 MBD3L2Q8NHZ7 208 aaPredicted RBP4.92□□□□□ -1.62
CMC1-202ENST00000396610 ZNF566Q969W8 418 aa4.92□□□□□ -1.62
CMC1-202ENST00000396610 C18orf8Q96DM3 657 aa4.92□□□□□ -1.62
CMC1-202ENST00000396610 ZDHHC12Q96GR4 267 aa4.92□□□□□ -1.62
CMC1-202ENST00000396610 CRAMP1Q96RY5 1269 aa4.92□□□□□ -1.62
CMC1-202ENST00000396610 MMS19Q96T76 1030 aa4.92□□□□□ -1.62
CMC1-202ENST00000396610 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.92□□□□□ -1.62
CMC1-202ENST00000396610 PCDHAC1Q9H158 963 aa4.92□□□□□ -1.62
CMC1-202ENST00000396610 ZBTB26Q9HCK0 441 aa4.92□□□□□ -1.62
CMC1-202ENST00000396610 SLC52A1Q9NWF4 448 aa4.92□□□□□ -1.62
CMC1-202ENST00000396610 AMFRQ9UKV5 643 aa4.92□□□□□ -1.62
CMC1-202ENST00000396610 M0R3H8 397 aa4.91□□□□□ -1.62
CMC1-202ENST00000396610 KCNQ3O43525 872 aa4.91□□□□□ -1.62
CMC1-202ENST00000396610 PECAM1P16284 738 aaPredicted RBP4.91□□□□□ -1.62
CMC1-202ENST00000396610 DIO1P49895 249 aa4.91□□□□□ -1.62
CMC1-202ENST00000396610 FHL3Q13643 280 aa4.91□□□□□ -1.62
CMC1-202ENST00000396610 BRD3Q15059 726 aa4.91□□□□□ -1.62
CMC1-202ENST00000396610 ARHGAP15Q53QZ3 475 aa4.91□□□□□ -1.62
CMC1-202ENST00000396610 DGKKQ5KSL6 1271 aa4.91□□□□□ -1.62
CMC1-202ENST00000396610 MRNIPQ6NTE8 343 aa4.91□□□□□ -1.62
CMC1-202ENST00000396610 FBXO38Q6PIJ6 1188 aa4.91□□□□□ -1.62
CMC1-202ENST00000396610 USP17L6PQ6QN14 398 aa4.91□□□□□ -1.62
CMC1-202ENST00000396610 SKAP1Q86WV1 359 aa4.91□□□□□ -1.62
CMC1-202ENST00000396610 RAB11FIP4Q86YS3 637 aa4.91□□□□□ -1.62
CMC1-202ENST00000396610 FSTL5Q8N475 847 aaPredicted RBP4.91□□□□□ -1.62
CMC1-202ENST00000396610 CYP2W1Q8TAV3 490 aa4.91□□□□□ -1.62
CMC1-202ENST00000396610 ZNF384Q8TF68 577 aa4.91□□□□□ -1.62
CMC1-202ENST00000396610 CTHRC1Q96CG8 243 aa4.91□□□□□ -1.62
CMC1-202ENST00000396610 SLC39A13Q96H72 371 aa4.91□□□□□ -1.62
CMC1-202ENST00000396610 SNX27Q96L92 541 aa4.91□□□□□ -1.62
CMC1-202ENST00000396610 CIPCQ9C0C6 399 aa4.91□□□□□ -1.62
CMC1-202ENST00000396610 ZCWPW1Q9H0M4 648 aa4.91□□□□□ -1.62
CMC1-202ENST00000396610 TRIM36Q9NQ86 728 aa4.91□□□□□ -1.62
CMC1-202ENST00000396610 RGL1Q9NZL6 768 aa4.91□□□□□ -1.62
CMC1-202ENST00000396610 STEAP1Q9UHE8 339 aa4.91□□□□□ -1.62
CMC1-202ENST00000396610 CDC23Q9UJX2 597 aa4.91□□□□□ -1.62
CMC1-202ENST00000396610 ZMYND8Q9ULU4 1186 aaPredicted RBP4.91□□□□□ -1.62
CMC1-202ENST00000396610 CEP83Q9Y592 693 aa4.91□□□□□ -1.62
CMC1-202ENST00000396610 COX11Q9Y6N1 276 aa4.91□□□□□ -1.62
CMC1-202ENST00000396610 TARM1B6A8C7 271 aa4.9□□□□□ -1.63
CMC1-202ENST00000396610 SMIM22K7EJ46 135 aa4.9□□□□□ -1.63
CMC1-202ENST00000396610 EXOC3O60645 756 aa4.9□□□□□ -1.63
CMC1-202ENST00000396610 FGAP02671 866 aa4.9□□□□□ -1.63
CMC1-202ENST00000396610 NHLRC4P0CG21 123 aaPredicted RBP4.9□□□□□ -1.63
CMC1-202ENST00000396610 CREB1P16220 341 aa4.9□□□□□ -1.63
CMC1-202ENST00000396610 EGR1P18146 543 aa4.9□□□□□ -1.63
CMC1-202ENST00000396610 EIF4A1P60842 406 aaKnown RBP4.9□□□□□ -1.63
CMC1-202ENST00000396610 LMAN2Q12907 356 aa4.9□□□□□ -1.63
CMC1-202ENST00000396610 CLCA4Q14CN2 919 aa4.9□□□□□ -1.63
CMC1-202ENST00000396610 SLC5A9Q2M3M2 681 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms