RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 SESTD1Q86VW0 696 aa17.27■□□□□ 0.36
TRIM39-205ENST00000396551 KBTBD7Q8WVZ9 684 aa17.27■□□□□ 0.36
TRIM39-205ENST00000396551 TEKT4Q8WW24 435 aa17.27■□□□□ 0.36
TRIM39-205ENST00000396551 USP6NLQ92738 828 aa17.27■□□□□ 0.36
TRIM39-205ENST00000396551 PAIP2Q9BPZ3 127 aaKnown RBP17.27■□□□□ 0.36
TRIM39-205ENST00000396551 ACSS3Q9H6R3 686 aa17.27■□□□□ 0.36
TRIM39-205ENST00000396551 PPCSQ9HAB8 311 aa17.27■□□□□ 0.36
TRIM39-205ENST00000396551 GNEQ9Y223 722 aaKnown RBP17.27■□□□□ 0.36
TRIM39-205ENST00000396551 NRCAMQ92823 1304 aa17.27■□□□□ 0.35
TRIM39-205ENST00000396551 SMIM35A0A1B0GVV1 85 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 H7C0C1 242 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 SPTLC1O15269 473 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 TYROBPO43914 113 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 CCDC130P13994 396 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 SDC4P31431 198 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 ATP5OP48047 213 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 IL9RQ01113 521 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 RNASELQ05823 741 aaKnown RBP17.26■□□□□ 0.35
TRIM39-205ENST00000396551 PDK2Q15119 407 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 BOLA3Q53S33 107 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 PNMA8AQ86V59 439 aaPredicted RBP17.26■□□□□ 0.35
TRIM39-205ENST00000396551 MZB1Q8WU39 189 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 SENP1Q9P0U3 644 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 HESX1Q9UBX0 185 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 FETUBQ9UGM5 382 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 CHMP2BQ9UQN3 213 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 A8MXQ7 604 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 MAP3K6O95382 1288 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 PHBP35232 272 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 SLC18A1P54219 525 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 SLC1A5Q15758 541 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 SLC9A4Q6AI14 798 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 UNC93AQ86WB7 457 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 PDIK1LQ8N165 341 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.26■□□□□ 0.35
TRIM39-205ENST00000396551 DNAJB3Q8WWF6 145 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 SMC6Q96SB8 1091 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 PAFAH2Q99487 392 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 KLK14Q9P0G3 267 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 SMAPO00193 183 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 SUN1O94901 812 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 LMO2P25791 158 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 ATXN1P54253 815 aaKnown RBP17.26■□□□□ 0.35
TRIM39-205ENST00000396551 XRCC4Q13426 336 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 MTFR1Q15390 333 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 FAM133BQ5BKY9 247 aaKnown RBP17.26■□□□□ 0.35
TRIM39-205ENST00000396551 ZNF618Q5T7W0 954 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 ADGRD1Q6QNK2 874 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 APBB1IPQ7Z5R6 666 aaPredicted RBP17.26■□□□□ 0.35
TRIM39-205ENST00000396551 AGGF1Q8N302 714 aaeCLIP17.26■□□□□ 0.35
TRIM39-205ENST00000396551 C7orf31Q8N865 590 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 LRRN4Q8WUT4 740 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 SPOCK2Q92563 424 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 PARK7Q99497 189 aaKnown RBP17.26■□□□□ 0.35
TRIM39-205ENST00000396551 MAGEB5Q9BZ81 275 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 RNF39Q9H2S5 420 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 SLC5A4Q9NY91 659 aa17.26■□□□□ 0.35
TRIM39-205ENST00000396551 SMG5Q9UPR3 1016 aaKnown RBP17.26■□□□□ 0.35
TRIM39-205ENST00000396551 PIRO00625 290 aa17.25■□□□□ 0.35
TRIM39-205ENST00000396551 UBOX5O94941 541 aa17.25■□□□□ 0.35
TRIM39-205ENST00000396551 GSTA1P08263 222 aa17.25■□□□□ 0.35
TRIM39-205ENST00000396551 PDGFRBP09619 1106 aa17.25■□□□□ 0.35
TRIM39-205ENST00000396551 RDXP35241 583 aaKnown RBP17.25■□□□□ 0.35
TRIM39-205ENST00000396551 ADAM17P78536 824 aa17.25■□□□□ 0.35
TRIM39-205ENST00000396551 MGAT5Q09328 741 aa17.25■□□□□ 0.35
TRIM39-205ENST00000396551 MAP7D3Q8IWC1 876 aa17.25■□□□□ 0.35
TRIM39-205ENST00000396551 STK32AQ8WU08 396 aa17.25■□□□□ 0.35
TRIM39-205ENST00000396551 DCAKDQ8WVC6 231 aa17.25■□□□□ 0.35
TRIM39-205ENST00000396551 C11orf84Q9BUA3 381 aaPredicted RBP17.25■□□□□ 0.35
TRIM39-205ENST00000396551 FLRT1Q9NZU1 646 aa17.25■□□□□ 0.35
TRIM39-205ENST00000396551 SLC15A5A6NIM6 579 aa17.25■□□□□ 0.35
TRIM39-205ENST00000396551 APOL1O14791 398 aa17.25■□□□□ 0.35
TRIM39-205ENST00000396551 RBL1P28749 1068 aa17.25■□□□□ 0.35
TRIM39-205ENST00000396551 ADORA2BP29275 332 aa17.25■□□□□ 0.35
TRIM39-205ENST00000396551 ELK3P41970 407 aa17.25■□□□□ 0.35
TRIM39-205ENST00000396551 ZNF200P98182 395 aaPredicted RBP17.25■□□□□ 0.35
TRIM39-205ENST00000396551 SPRYD7Q5W111 196 aa17.25■□□□□ 0.35
TRIM39-205ENST00000396551 FAM47EQ6ZV65 393 aa17.25■□□□□ 0.35
TRIM39-205ENST00000396551 PALM2Q8IXS6 379 aa17.25■□□□□ 0.35
TRIM39-205ENST00000396551 FUKQ8N0W3 1084 aa17.25■□□□□ 0.35
TRIM39-205ENST00000396551 UBQLN1Q9UMX0 589 aaKnown RBP17.25■□□□□ 0.35
TRIM39-205ENST00000396551 ARL2BPQ9Y2Y0 163 aa17.25■□□□□ 0.35
TRIM39-205ENST00000396551 HEY1Q9Y5J3 304 aa17.25■□□□□ 0.35
TRIM39-205ENST00000396551 SMIM28A0A1B0GU29 152 aa17.25■□□□□ 0.35
TRIM39-205ENST00000396551 MDM4O15151 490 aa17.25■□□□□ 0.35
TRIM39-205ENST00000396551 KCNN4O15554 427 aa17.25■□□□□ 0.35
TRIM39-205ENST00000396551 TGM2P21980 687 aa17.25■□□□□ 0.35
TRIM39-205ENST00000396551 OLFML2BQ68BL8 750 aa17.25■□□□□ 0.35
TRIM39-205ENST00000396551 EP400NLQ6ZTU2 488 aa17.25■□□□□ 0.35
TRIM39-205ENST00000396551 FAF2Q96CS3 445 aa17.25■□□□□ 0.35
TRIM39-205ENST00000396551 RTP4Q96DX8 246 aa17.25■□□□□ 0.35
TRIM39-205ENST00000396551 TBCBQ99426 244 aa17.25■□□□□ 0.35
TRIM39-205ENST00000396551 TRIM6Q9C030 488 aaPredicted RBP17.25■□□□□ 0.35
TRIM39-205ENST00000396551 GOLGA2P5Q9HBQ8 144 aa17.25■□□□□ 0.35
TRIM39-205ENST00000396551 CA4P22748 312 aa17.24■□□□□ 0.35
TRIM39-205ENST00000396551 BCAR1P56945 870 aa17.24■□□□□ 0.35
TRIM39-205ENST00000396551 CDC42EP1Q00587 391 aa17.24■□□□□ 0.35
TRIM39-205ENST00000396551 SOX4Q06945 474 aaPredicted RBP17.24■□□□□ 0.35
TRIM39-205ENST00000396551 MFSD10Q14728 455 aa17.24■□□□□ 0.35
TRIM39-205ENST00000396551 GALNTL6Q49A17 601 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms