RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 DNAJC3Q13217 504 aa16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 BMPR2Q13873 1038 aa16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 TTC13Q8NBP0 860 aa16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 SYT15Q9BQS2 421 aa16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 MTG1Q9BT17 334 aaPredicted RBP16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 RASSF4Q9H2L5 321 aa16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 LRRC19Q9H756 370 aa16.56■□□□□ 0.24
SMARCD1-202ENST00000394963 PAEPP09466 180 aa16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 GOT1P17174 413 aa16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 CCND3P30281 292 aaPredicted RBP16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 PITX1P78337 314 aaPredicted RBP16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 GBE1Q04446 702 aa16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 GDF6Q6KF10 455 aaPredicted RBP16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 LRRC34Q8IZ02 419 aa16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 B3GALNT2Q8NCR0 500 aa16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 APBA2Q99767 749 aa16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 FOCADQ5VW36 1801 aa16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 GOLGA8TH3BQL2 631 aa16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 PAPSS1O43252 624 aaPredicted RBP16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 TADA2AO75478 443 aa16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 LILRA4P59901 499 aa16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 SLC6A3Q01959 620 aa16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 ZNF268Q14587 947 aaPredicted RBP16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 ZNF449Q6P9G9 518 aa16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 SAPCD2Q86UD0 394 aa16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 MYCBPAPQ8TBZ2 947 aa16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 TBCBQ99426 244 aa16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 SEPT5Q99719 369 aaPredicted RBP16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 BEGAINQ9BUH8 593 aa16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 KLC2Q9H0B6 622 aa16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 TRABDQ9H4I3 376 aa16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 PADI3Q9ULW8 664 aa16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 STAP1Q9ULZ2 295 aa16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 C2CD2Q9Y426 696 aa16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 RPL22P35268 128 aaKnown RBP16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 BCAT1P54687 386 aa16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 OVGP1Q12889 678 aa16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 EFHC2Q5JST6 749 aa16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 VPS52Q8N1B4 723 aa16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 LRRC8CQ8TDW0 803 aa16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 FBF1Q8TES7 1133 aa16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 KAT2BQ92831 832 aa16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 XPO6Q96QU8 1125 aaKnown RBP16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 TRPV6Q9H1D0 765 aa16.55■□□□□ 0.24
SMARCD1-202ENST00000394963 FGFR1P11362 822 aa16.54■□□□□ 0.24
SMARCD1-202ENST00000394963 ZNF252P-AS1Q0IIN9 211 aa16.54■□□□□ 0.24
SMARCD1-202ENST00000394963 BST2Q10589 180 aaKnown RBP16.54■□□□□ 0.24
SMARCD1-202ENST00000394963 SEPT6Q14141 434 aa16.54■□□□□ 0.24
SMARCD1-202ENST00000394963 MROH9Q5TGP6 573 aa16.54■□□□□ 0.24
SMARCD1-202ENST00000394963 IL31Q6EBC2 164 aa16.54■□□□□ 0.24
SMARCD1-202ENST00000394963 ARRDC4Q8NCT1 418 aa16.54■□□□□ 0.24
SMARCD1-202ENST00000394963 TGS1Q96RS0 853 aaKnown RBP16.54■□□□□ 0.24
SMARCD1-202ENST00000394963 UNKQ9C0B0 810 aaKnown RBP16.54■□□□□ 0.24
SMARCD1-202ENST00000394963 EPN3Q9H201 632 aa16.54■□□□□ 0.24
SMARCD1-202ENST00000394963 ATXN3LQ9H3M9 355 aa16.54■□□□□ 0.24
SMARCD1-202ENST00000394963 MARCOQ9UEW3 520 aaPredicted RBP16.54■□□□□ 0.24
SMARCD1-202ENST00000394963 A0A087WUV0 522 aaPredicted RBP16.54■□□□□ 0.24
SMARCD1-202ENST00000394963 PTPN1P18031 435 aaKnown RBP16.54■□□□□ 0.24
SMARCD1-202ENST00000394963 KRT4P19013 534 aa16.54■□□□□ 0.24
SMARCD1-202ENST00000394963 ECHS1P30084 290 aa16.54■□□□□ 0.24
SMARCD1-202ENST00000394963 ELK3P41970 407 aa16.54■□□□□ 0.24
SMARCD1-202ENST00000394963 CCL23P55773 120 aa16.54■□□□□ 0.24
SMARCD1-202ENST00000394963 TPI1P60174 286 aa16.54■□□□□ 0.24
SMARCD1-202ENST00000394963 CD99L2Q8TCZ2 262 aa16.54■□□□□ 0.24
SMARCD1-202ENST00000394963 PTPRHQ9HD43 1115 aa16.54■□□□□ 0.24
SMARCD1-202ENST00000394963 G3BP2Q9UN86 482 aaKnown RBP16.54■□□□□ 0.24
SMARCD1-202ENST00000394963 GON4LQ3T8J9 2241 aa16.54■□□□□ 0.24
SMARCD1-202ENST00000394963 KNL1Q8NG31 2342 aa16.54■□□□□ 0.24
SMARCD1-202ENST00000394963 F8W810 466 aa16.54■□□□□ 0.24
SMARCD1-202ENST00000394963 BNIP3LO60238 219 aa16.54■□□□□ 0.24
SMARCD1-202ENST00000394963 CDKN2BP42772 138 aa16.54■□□□□ 0.24
SMARCD1-202ENST00000394963 PKN2Q16513 984 aaKnown RBP16.54■□□□□ 0.24
SMARCD1-202ENST00000394963 KCNT2Q6UVM3 1135 aa16.54■□□□□ 0.24
SMARCD1-202ENST00000394963 CD101Q93033 1021 aa16.54■□□□□ 0.24
SMARCD1-202ENST00000394963 CHMP6Q96FZ7 201 aa16.54■□□□□ 0.24
SMARCD1-202ENST00000394963 PITPNM3Q9BZ71 974 aa16.54■□□□□ 0.24
SMARCD1-202ENST00000394963 ZC3H7BQ9UGR2 993 aaKnown RBP16.54■□□□□ 0.24
SMARCD1-202ENST00000394963 TRUB2O95900 331 aaKnown RBP16.53■□□□□ 0.24
SMARCD1-202ENST00000394963 KYAT1Q16773 422 aa16.53■□□□□ 0.24
SMARCD1-202ENST00000394963 FAM228AQ86W67 206 aa16.53■□□□□ 0.24
SMARCD1-202ENST00000394963 CCDC197Q8NCU1 140 aa16.53■□□□□ 0.24
SMARCD1-202ENST00000394963 TRIB2Q92519 343 aa16.53■□□□□ 0.24
SMARCD1-202ENST00000394963 MFHAS1Q9Y4C4 1052 aa16.53■□□□□ 0.24
SMARCD1-202ENST00000394963 A0A0G2JND7 137 aa16.53■□□□□ 0.24
SMARCD1-202ENST00000394963 TCRBV7S3A2A0A539 114 aa16.53■□□□□ 0.24
SMARCD1-202ENST00000394963 TPH1P17752 444 aa16.53■□□□□ 0.24
SMARCD1-202ENST00000394963 MRPS6P82932 125 aaKnown RBP16.53■□□□□ 0.24
SMARCD1-202ENST00000394963 TSPY1Q01534 308 aa16.53■□□□□ 0.24
SMARCD1-202ENST00000394963 HIC1Q14526 733 aa16.53■□□□□ 0.24
SMARCD1-202ENST00000394963 MGAT5BQ3V5L5 792 aa16.53■□□□□ 0.24
SMARCD1-202ENST00000394963 GLB1LQ6UWU2 654 aa16.53■□□□□ 0.24
SMARCD1-202ENST00000394963 RASAL3Q86YV0 1011 aa16.53■□□□□ 0.24
SMARCD1-202ENST00000394963 SPATA2LQ8IUW3 424 aaPredicted RBP16.53■□□□□ 0.24
SMARCD1-202ENST00000394963 AGO3Q9H9G7 860 aaKnown RBP16.53■□□□□ 0.24
SMARCD1-202ENST00000394963 EEF2KO00418 725 aaKnown RBP16.52■□□□□ 0.24
SMARCD1-202ENST00000394963 YWHAZP63104 245 aaKnown RBP16.52■□□□□ 0.24
SMARCD1-202ENST00000394963 PCSK7Q16549 785 aa16.52■□□□□ 0.24
SMARCD1-202ENST00000394963 BOLA3Q53S33 107 aa16.52■□□□□ 0.24
SMARCD1-202ENST00000394963 BTBD8Q5XKL5 378 aa16.52■□□□□ 0.24
SMARCD1-202ENST00000394963 FBXW10Q5XX13 1052 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms