RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 FAM47DPA6NHR8 397 aa16.19■□□□□ 0.18
PTBP1-204ENST00000394601 LACTBL1A8MY62 500 aa16.19■□□□□ 0.18
PTBP1-204ENST00000394601 GPD2P43304 727 aa16.19■□□□□ 0.18
PTBP1-204ENST00000394601 YWHAEP62258 255 aaKnown RBP16.19■□□□□ 0.18
PTBP1-204ENST00000394601 TRPC3Q13507 836 aa16.19■□□□□ 0.18
PTBP1-204ENST00000394601 EFHC2Q5JST6 749 aa16.19■□□□□ 0.18
PTBP1-204ENST00000394601 ZBTB8OSQ8IWT0 167 aa16.19■□□□□ 0.18
PTBP1-204ENST00000394601 FAM161BQ96MY7 647 aa16.19■□□□□ 0.18
PTBP1-204ENST00000394601 TTC25Q96NG3 672 aa16.19■□□□□ 0.18
PTBP1-204ENST00000394601 STRIP2Q9ULQ0 834 aa16.19■□□□□ 0.18
PTBP1-204ENST00000394601 ZNF711Q9Y462 761 aa16.19■□□□□ 0.18
PTBP1-204ENST00000394601 CENPFP49454 3210 aa16.19■□□□□ 0.18
PTBP1-204ENST00000394601 ADM5C9JUS6 153 aa16.19■□□□□ 0.18
PTBP1-204ENST00000394601 GNAZP19086 355 aa16.19■□□□□ 0.18
PTBP1-204ENST00000394601 PSMA2P25787 234 aa16.19■□□□□ 0.18
PTBP1-204ENST00000394601 NRLP54845 237 aa16.19■□□□□ 0.18
PTBP1-204ENST00000394601 IL9RQ01113 521 aa16.19■□□□□ 0.18
PTBP1-204ENST00000394601 ACVR2BQ13705 512 aa16.19■□□□□ 0.18
PTBP1-204ENST00000394601 FAM187BQ17R55 369 aa16.19■□□□□ 0.18
PTBP1-204ENST00000394601 ARHGEF18Q6ZSZ5 1173 aa16.19■□□□□ 0.18
PTBP1-204ENST00000394601 CEP70Q8NHQ1 597 aa16.19■□□□□ 0.18
PTBP1-204ENST00000394601 MAK16Q9BXY0 300 aaKnown RBP16.19■□□□□ 0.18
PTBP1-204ENST00000394601 PHACTR1Q9C0D0 580 aa16.19■□□□□ 0.18
PTBP1-204ENST00000394601 NXF1Q9UBU9 619 aaKnown RBP16.19■□□□□ 0.18
PTBP1-204ENST00000394601 EXOC1LA0A1B0GW35 172 aa16.18■□□□□ 0.18
PTBP1-204ENST00000394601 A0A1W2PPM1 405 aa16.18■□□□□ 0.18
PTBP1-204ENST00000394601 TMEM63AO94886 807 aa16.18■□□□□ 0.18
PTBP1-204ENST00000394601 RPL22P35268 128 aaKnown RBP16.18■□□□□ 0.18
PTBP1-204ENST00000394601 EFTUD2Q15029 972 aaKnown RBP eCLIP16.18■□□□□ 0.185e-8■■■□□ 17.3
PTBP1-204ENST00000394601 SH3PXD2AQ5TCZ1 1133 aa16.18■□□□□ 0.18
PTBP1-204ENST00000394601 JADE1Q6IE81 842 aa16.18■□□□□ 0.18
PTBP1-204ENST00000394601 EFCAB12Q6NXP0 572 aa16.18■□□□□ 0.18
PTBP1-204ENST00000394601 UNC45BQ8IWX7 931 aa16.18■□□□□ 0.18
PTBP1-204ENST00000394601 ZBED8Q8IZ13 594 aa16.18■□□□□ 0.18
PTBP1-204ENST00000394601 OPTNQ96CV9 577 aa16.18■□□□□ 0.18
PTBP1-204ENST00000394601 NLRP4Q96MN2 994 aa16.18■□□□□ 0.18
PTBP1-204ENST00000394601 SPATA33Q96N06 139 aa16.18■□□□□ 0.18
PTBP1-204ENST00000394601 ZWILCHQ9H900 591 aa16.18■□□□□ 0.18
PTBP1-204ENST00000394601 DNAAF2Q9NVR5 837 aaKnown RBP16.18■□□□□ 0.18
PTBP1-204ENST00000394601 LRRC42Q9Y546 428 aa16.18■□□□□ 0.18
PTBP1-204ENST00000394601 GOLGA8SH3BPF8 625 aa16.18■□□□□ 0.18
PTBP1-204ENST00000394601 GOLGA8MH3BSY2 632 aa16.18■□□□□ 0.18
PTBP1-204ENST00000394601 CSDE1O75534 798 aaKnown RBP16.18■□□□□ 0.18
PTBP1-204ENST00000394601 HNRNPCP07910 306 aaKnown RBP eCLIP16.18■□□□□ 0.18
PTBP1-204ENST00000394601 PFKMP08237 780 aa16.18■□□□□ 0.18
PTBP1-204ENST00000394601 RPA3P35244 121 aaPredicted RBP16.18■□□□□ 0.18
PTBP1-204ENST00000394601 VHLP40337 213 aa16.18■□□□□ 0.18
PTBP1-204ENST00000394601 AGGF1Q8N302 714 aaeCLIP16.18■□□□□ 0.18
PTBP1-204ENST00000394601 PIWIL1Q96J94 861 aaKnown RBP16.18■□□□□ 0.18
PTBP1-204ENST00000394601 FBXO6Q9NRD1 293 aaPredicted RBP16.18■□□□□ 0.18
PTBP1-204ENST00000394601 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.18■□□□□ 0.183e-7■■□□□ 11.9
PTBP1-204ENST00000394601 DNAH12Q6ZR08 3092 aa16.18■□□□□ 0.18
PTBP1-204ENST00000394601 MAP3K7O43318 606 aa16.18■□□□□ 0.18
PTBP1-204ENST00000394601 CST8O60676 142 aa16.18■□□□□ 0.18
PTBP1-204ENST00000394601 MICAL2O94851 1124 aa16.18■□□□□ 0.18
PTBP1-204ENST00000394601 MKRN3Q13064 507 aaKnown RBP16.18■□□□□ 0.18
PTBP1-204ENST00000394601 SLC1A5Q15758 541 aa16.18■□□□□ 0.18
PTBP1-204ENST00000394601 RNF43Q68DV7 783 aa16.18■□□□□ 0.18
PTBP1-204ENST00000394601 GADL1Q6ZQY3 521 aa16.18■□□□□ 0.18
PTBP1-204ENST00000394601 ERLEC1Q96DZ1 483 aa16.18■□□□□ 0.18
PTBP1-204ENST00000394601 ANKRD36BP1Q96IX9 119 aa16.18■□□□□ 0.18
PTBP1-204ENST00000394601 PDZD7Q9H5P4 517 aa16.18■□□□□ 0.18
PTBP1-204ENST00000394601 VPS37BQ9H9H4 285 aa16.18■□□□□ 0.18
PTBP1-204ENST00000394601 CYLDQ9NQC7 956 aa16.18■□□□□ 0.18
PTBP1-204ENST00000394601 TBX10O75333 385 aa16.17■□□□□ 0.18
PTBP1-204ENST00000394601 PGM3O95394 542 aa16.17■□□□□ 0.18
PTBP1-204ENST00000394601 TRUB2O95900 331 aaKnown RBP16.17■□□□□ 0.18
PTBP1-204ENST00000394601 CETN2P41208 172 aa16.17■□□□□ 0.18
PTBP1-204ENST00000394601 PSMC1P62191 440 aaKnown RBP16.17■□□□□ 0.18
PTBP1-204ENST00000394601 CBLBQ13191 982 aa16.17■□□□□ 0.18
PTBP1-204ENST00000394601 SLC10A6Q3KNW5 377 aa16.17■□□□□ 0.18
PTBP1-204ENST00000394601 IFNLR1Q8IU57 520 aaPredicted RBP16.17■□□□□ 0.18
PTBP1-204ENST00000394601 HIC2Q96JB3 615 aa16.17■□□□□ 0.18
PTBP1-204ENST00000394601 CLPTM1LQ96KA5 538 aa16.17■□□□□ 0.18
PTBP1-204ENST00000394601 FETUBQ9UGM5 382 aa16.17■□□□□ 0.18
PTBP1-204ENST00000394601 SGK1O00141 431 aa16.17■□□□□ 0.18
PTBP1-204ENST00000394601 C1QAP02745 245 aa16.17■□□□□ 0.18
PTBP1-204ENST00000394601 SERPINB3P29508 390 aa16.17■□□□□ 0.18
PTBP1-204ENST00000394601 MIPP30301 263 aa16.17■□□□□ 0.18
PTBP1-204ENST00000394601 DYNLT1P63172 113 aa16.17■□□□□ 0.18
PTBP1-204ENST00000394601 PTPN11Q06124 597 aaPredicted RBP16.17■□□□□ 0.18
PTBP1-204ENST00000394601 PDIA2Q13087 525 aaKnown RBP16.17■□□□□ 0.18
PTBP1-204ENST00000394601 IZUMO2Q6UXV1 221 aa16.17■□□□□ 0.18
PTBP1-204ENST00000394601 IGDCC3Q8IVU1 814 aa16.17■□□□□ 0.18
PTBP1-204ENST00000394601 WDR60Q8WVS4 1066 aa16.17■□□□□ 0.18
PTBP1-204ENST00000394601 NRG4Q8WWG1 115 aa16.17■□□□□ 0.18
PTBP1-204ENST00000394601 CXCL16Q9H2A7 254 aa16.17■□□□□ 0.18
PTBP1-204ENST00000394601 ELP3Q9H9T3 547 aa16.17■□□□□ 0.18
PTBP1-204ENST00000394601 KCNH4Q9UQ05 1017 aa16.17■□□□□ 0.18
PTBP1-204ENST00000394601 CITO14578 2027 aa16.17■□□□□ 0.18
PTBP1-204ENST00000394601 SCN1AP35498 2009 aa16.17■□□□□ 0.18
PTBP1-204ENST00000394601 INO80B-WBP1J3KQ70 363 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 OR6B1O95007 311 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 IL18RAPO95256 599 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 NPTXRO95502 500 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 TNNC2P02585 160 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 STAG3L1P0CL83 205 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 CCNB1P14635 433 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 FUT4P22083 530 aa16.16■□□□□ 0.18
PTBP1-204ENST00000394601 ACSBG2Q5FVE4 666 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms