RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 PSKH2Q96QS6 385 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 PANX2Q96RD6 677 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 USP28Q96RU2 1077 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 WDR24Q96S15 920 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 AIFM2Q9BRQ8 373 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 PHF20Q9BVI0 1012 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 SPATA16Q9BXB7 569 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 EMILIN2Q9BXX0 1053 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 ZNF341Q9BYN7 854 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 BCO2Q9BYV7 579 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 XPO4Q9C0E2 1151 aaKnown RBP2.76□□□□□ -1.97
TRAV41-201ENST00000390468 TMEM39BQ9GZU3 492 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 RAB17Q9H0T7 212 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 VPS16Q9H269 839 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 FOXP1Q9H334 677 aaPredicted RBP2.76□□□□□ -1.97
TRAV41-201ENST00000390468 NDST4Q9H3R1 872 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 TAF1DQ9H5J8 278 aaPredicted RBP2.76□□□□□ -1.97
TRAV41-201ENST00000390468 C10orf88Q9H8K7 445 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 KANSL2Q9H9L4 492 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 SLC38A10Q9HBR0 1119 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 VAT1LQ9HCJ6 419 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 CD320Q9NPF0 282 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 SH3GLB2Q9NR46 395 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 ADARB2Q9NS39 739 aaKnown RBP2.76□□□□□ -1.97
TRAV41-201ENST00000390468 SEMA3GQ9NS98 782 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 TXLNGQ9NUQ3 528 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 TBC1D23Q9NUY8 699 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 MRGBPQ9NV56 204 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 TYW1Q9NV66 732 aaKnown RBP2.76□□□□□ -1.97
TRAV41-201ENST00000390468 FAIMQ9NVQ4 179 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 MTMR4Q9NYA4 1195 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 GGA3Q9NZ52 723 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 GPRC5DQ9NZD1 345 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 IFNKQ9P0W0 207 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 VPS54Q9P1Q0 977 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 NYAP2Q9P242 653 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 CRNNQ9UBG3 495 aaPredicted RBP2.76□□□□□ -1.97
TRAV41-201ENST00000390468 IP6K2Q9UHH9 426 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 XPO7Q9UIA9 1087 aaKnown RBP2.76□□□□□ -1.97
TRAV41-201ENST00000390468 ZBTB21Q9ULJ3 1066 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 RPL26L1Q9UNX3 145 aaKnown RBP2.76□□□□□ -1.97
TRAV41-201ENST00000390468 KCNJ14Q9UNX9 436 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 SLC12A4Q9UP95 1085 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 EXOC7Q9UPT5 735 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 LZTS1Q9Y250 596 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 TMA7Q9Y2S6 64 aaKnown RBP2.76□□□□□ -1.97
TRAV41-201ENST00000390468 GIT1Q9Y2X7 761 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 TRIM17Q9Y577 477 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 PPP2R3BQ9Y5P8 575 aa2.76□□□□□ -1.97
TRAV41-201ENST00000390468 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.76□□□□□ -1.97
TRAV41-201ENST00000390468 TDRD15B5MCY1 1934 aaKnown RBP2.76□□□□□ -1.97
TRAV41-201ENST00000390468 RALGAPA2Q2PPJ7 1873 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 GOLGB1Q14789 3259 aaKnown RBP2.75□□□□□ -1.97
TRAV41-201ENST00000390468 SSC5DA1L4H1 1573 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 MROH7Q68CQ1 1323 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 ITIH6Q6UXX5 1313 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 UTRNP46939 3433 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 DNAJC25-GNG10A0A024R161 153 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 SMCO2A6NFE2 343 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 C5orf60A6NFR6 353 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 BTBD18B2RXH4 712 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 HNRNPCL2B2RXH8 293 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 FAM47E-STBD1D6RA91 191 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 UBE2Q2LH0YL09 131 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 O00370 1275 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 XPO1O14980 1071 aaKnown RBP2.75□□□□□ -1.97
TRAV41-201ENST00000390468 MCF2LO15068 1137 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 ASAP2O43150 1006 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 XPOTO43592 962 aaKnown RBP2.75□□□□□ -1.97
TRAV41-201ENST00000390468 TRAPPC3O43617 180 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 SULT1B1O43704 296 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 HNRNPCL1O60812 293 aaKnown RBP2.75□□□□□ -1.97
TRAV41-201ENST00000390468 CNOT3O75175 753 aaKnown RBP2.75□□□□□ -1.97
TRAV41-201ENST00000390468 ZNF254O75437 659 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 TOMM70O94826 608 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 DDNO94850 711 aaPredicted RBP2.75□□□□□ -1.97
TRAV41-201ENST00000390468 SLITRK5O94991 958 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 OXSR1O95747 527 aaPredicted RBP2.75□□□□□ -1.97
TRAV41-201ENST00000390468 BMP15O95972 392 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 NDUFB10O96000 172 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 CYP1A2P05177 515 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 MYZAPP0CAP1 466 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 SNHG28P0DPA3 235 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 MYBL1P10243 752 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 TGFB3P10600 412 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 PTPN2P17706 415 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 DDX5P17844 614 aaKnown RBP2.75□□□□□ -1.97
TRAV41-201ENST00000390468 CD53P19397 219 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 CD9P21926 228 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 TNFRSF8P28908 595 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 GNA11P29992 359 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 CDC25CP30307 473 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 NTF4P34130 210 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 KRT20P35900 424 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 CAP2P40123 477 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 VHLP40337 213 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 SKIV2L2P42285 1042 aaKnown RBP2.75□□□□□ -1.97
TRAV41-201ENST00000390468 MSH2P43246 934 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 ME1P48163 572 aa2.75□□□□□ -1.97
TRAV41-201ENST00000390468 PTDSS1P48651 473 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms