RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 POLNQ7Z5Q5 900 aa14.76□□□□□ -0.05
RTF1-201ENST00000389629 NET1Q7Z628 596 aaPredicted RBP14.76□□□□□ -0.05
RTF1-201ENST00000389629 EXOC8Q8IYI6 725 aa14.76□□□□□ -0.05
RTF1-201ENST00000389629 ZSCAN18Q8TBC5 510 aaPredicted RBP14.76□□□□□ -0.05
RTF1-201ENST00000389629 PRMT6Q96LA8 375 aaPredicted RBP14.76□□□□□ -0.05
RTF1-201ENST00000389629 GID8Q9NWU2 228 aa14.76□□□□□ -0.05
RTF1-201ENST00000389629 SPATA31A5Q5VU36 1347 aa14.76□□□□□ -0.05
RTF1-201ENST00000389629 SPATA31A7Q8IWB4 1347 aa14.76□□□□□ -0.05
RTF1-201ENST00000389629 COL1A1P02452 1464 aaPredicted RBP14.76□□□□□ -0.05
RTF1-201ENST00000389629 KCPQ6ZWJ8 1503 aa14.76□□□□□ -0.05
RTF1-201ENST00000389629 ABHD2P08910 425 aa14.76□□□□□ -0.05
RTF1-201ENST00000389629 CLK2P49760 499 aaKnown RBP14.76□□□□□ -0.05
RTF1-201ENST00000389629 MAMLD1Q13495 774 aa14.76□□□□□ -0.05
RTF1-201ENST00000389629 IL31Q6EBC2 164 aa14.76□□□□□ -0.05
RTF1-201ENST00000389629 TRIM74Q86UV6 250 aa14.76□□□□□ -0.05
RTF1-201ENST00000389629 TRIM73Q86UV7 250 aa14.76□□□□□ -0.05
RTF1-201ENST00000389629 MMADHCQ9H3L0 296 aaPredicted RBP14.76□□□□□ -0.05
RTF1-201ENST00000389629 AGO4Q9HCK5 861 aaKnown RBP14.76□□□□□ -0.05
RTF1-201ENST00000389629 PRKCBP05771 671 aa14.76□□□□□ -0.05
RTF1-201ENST00000389629 LINGO3P0C6S8 592 aa14.76□□□□□ -0.05
RTF1-201ENST00000389629 PKNOX1P55347 436 aa14.76□□□□□ -0.05
RTF1-201ENST00000389629 FASTKD3Q14CZ7 662 aaKnown RBP14.76□□□□□ -0.05
RTF1-201ENST00000389629 EMC10Q5UCC4 262 aa14.76□□□□□ -0.05
RTF1-201ENST00000389629 RINLQ6ZS11 566 aa14.76□□□□□ -0.05
RTF1-201ENST00000389629 KLHL23Q8NBE8 558 aa14.76□□□□□ -0.05
RTF1-201ENST00000389629 MYH6P13533 1939 aa14.76□□□□□ -0.05
RTF1-201ENST00000389629 MAN1A2O60476 641 aa14.76□□□□□ -0.05
RTF1-201ENST00000389629 THRAP10827 490 aa14.76□□□□□ -0.05
RTF1-201ENST00000389629 ITGA9Q13797 1035 aa14.76□□□□□ -0.05
RTF1-201ENST00000389629 USP6NLQ92738 828 aa14.76□□□□□ -0.05
RTF1-201ENST00000389629 CNDP1Q96KN2 507 aa14.76□□□□□ -0.05
RTF1-201ENST00000389629 TMEM39BQ9GZU3 492 aa14.76□□□□□ -0.05
RTF1-201ENST00000389629 LRRC4CQ9HCJ2 640 aa14.76□□□□□ -0.05
RTF1-201ENST00000389629 DDX28Q9NUL7 540 aaKnown RBP14.76□□□□□ -0.05
RTF1-201ENST00000389629 PIH1D1Q9NWS0 290 aaKnown RBP14.76□□□□□ -0.05
RTF1-201ENST00000389629 BAZ2AQ9UIF9 1905 aaKnown RBP14.76□□□□□ -0.05
RTF1-201ENST00000389629 SLC4A1P02730 911 aa14.75□□□□□ -0.05
RTF1-201ENST00000389629 RALBP11234 206 aa14.75□□□□□ -0.05
RTF1-201ENST00000389629 HSPA13P48723 471 aa14.75□□□□□ -0.05
RTF1-201ENST00000389629 WDR4P57081 412 aaKnown RBP14.75□□□□□ -0.05
RTF1-201ENST00000389629 GRIK3Q13003 919 aa14.75□□□□□ -0.05
RTF1-201ENST00000389629 C4orf19Q8IY42 314 aa14.75□□□□□ -0.05
RTF1-201ENST00000389629 C17orf75Q9HAS0 396 aa14.75□□□□□ -0.05
RTF1-201ENST00000389629 CYLDQ9NQC7 956 aa14.75□□□□□ -0.05
RTF1-201ENST00000389629 GPATCH2LQ9NWQ4 482 aa14.75□□□□□ -0.05
RTF1-201ENST00000389629 KCNK4Q9NYG8 393 aa14.75□□□□□ -0.05
RTF1-201ENST00000389629 RPL26L1Q9UNX3 145 aaKnown RBP14.75□□□□□ -0.05
RTF1-201ENST00000389629 C6orf222P0C671 652 aaPredicted RBP14.75□□□□□ -0.05
RTF1-201ENST00000389629 PDAP1Q13442 181 aaKnown RBP14.75□□□□□ -0.05
RTF1-201ENST00000389629 RBM15BQ8NDT2 890 aaKnown RBP14.75□□□□□ -0.05
RTF1-201ENST00000389629 SEMA6AQ9H2E6 1030 aa14.75□□□□□ -0.05
RTF1-201ENST00000389629 LRRC4Q9HBW1 653 aa14.75□□□□□ -0.05
RTF1-201ENST00000389629 CDYLQ9Y232 598 aa14.75□□□□□ -0.05
RTF1-201ENST00000389629 TBX10O75333 385 aa14.75□□□□□ -0.05
RTF1-201ENST00000389629 ICAM1P05362 532 aa14.75□□□□□ -0.05
RTF1-201ENST00000389629 RPL5P46777 297 aaKnown RBP14.75□□□□□ -0.05
RTF1-201ENST00000389629 RPL7AP62424 266 aaKnown RBP14.75□□□□□ -0.05
RTF1-201ENST00000389629 ZNF333Q96JL9 665 aa14.75□□□□□ -0.05
RTF1-201ENST00000389629 CDRT15Q96T59 188 aa14.75□□□□□ -0.05
RTF1-201ENST00000389629 EPAS1Q99814 870 aa14.75□□□□□ -0.05
RTF1-201ENST00000389629 PRR5-ARHGAP8B1AHC4 643 aa14.75□□□□□ -0.05
RTF1-201ENST00000389629 NELFEP18615 380 aaKnown RBP14.75□□□□□ -0.05
RTF1-201ENST00000389629 SLC1A6P48664 564 aa14.75□□□□□ -0.05
RTF1-201ENST00000389629 RTP1P59025 263 aa14.75□□□□□ -0.05
RTF1-201ENST00000389629 NLRP11P59045 1033 aaKnown RBP14.75□□□□□ -0.05
RTF1-201ENST00000389629 MYL6P60660 151 aa14.75□□□□□ -0.05
RTF1-201ENST00000389629 ARHGAP8P85298 464 aa14.75□□□□□ -0.05
RTF1-201ENST00000389629 YWHAHQ04917 246 aaPredicted RBP14.75□□□□□ -0.05
RTF1-201ENST00000389629 N4BP2L1Q5TBK1 243 aaPredicted RBP14.75□□□□□ -0.05
RTF1-201ENST00000389629 GADL1Q6ZQY3 521 aa14.75□□□□□ -0.05
RTF1-201ENST00000389629 ATP6V1E2Q96A05 226 aa14.75□□□□□ -0.05
RTF1-201ENST00000389629 SLITRK1Q96PX8 696 aa14.75□□□□□ -0.05
RTF1-201ENST00000389629 CISHQ9NSE2 258 aa14.75□□□□□ -0.05
RTF1-201ENST00000389629 PCDHAC2Q9Y5I4 1007 aa14.75□□□□□ -0.05
RTF1-201ENST00000389629 ALDH1A3P47895 512 aa14.74□□□□□ -0.05
RTF1-201ENST00000389629 ACVR2BQ13705 512 aa14.74□□□□□ -0.05
RTF1-201ENST00000389629 PATL1Q86TB9 770 aaKnown RBP14.74□□□□□ -0.05
RTF1-201ENST00000389629 CERS5Q8N5B7 392 aa14.74□□□□□ -0.05
RTF1-201ENST00000389629 ZNF398Q8TD17 642 aa14.74□□□□□ -0.05
RTF1-201ENST00000389629 DNAJC1Q96KC8 554 aaKnown RBP14.74□□□□□ -0.05
RTF1-201ENST00000389629 SMIM31A0A1B0GVY4 71 aa14.74□□□□□ -0.05
RTF1-201ENST00000389629 AMPD1P23109 780 aa14.74□□□□□ -0.05
RTF1-201ENST00000389629 GLRA2P23416 452 aa14.74□□□□□ -0.05
RTF1-201ENST00000389629 PSMD7P51665 324 aa14.74□□□□□ -0.05
RTF1-201ENST00000389629 USP10Q14694 798 aaKnown RBP14.74□□□□□ -0.05
RTF1-201ENST00000389629 KDELC2Q7Z4H8 507 aa14.74□□□□□ -0.05
RTF1-201ENST00000389629 ILKAPQ9H0C8 392 aaPredicted RBP14.74□□□□□ -0.05
RTF1-201ENST00000389629 KCNQ5Q9NR82 932 aa14.74□□□□□ -0.05
RTF1-201ENST00000389629 TMX2Q9Y320 296 aa14.74□□□□□ -0.05
RTF1-201ENST00000389629 GPD1P21695 349 aa14.74□□□□□ -0.05
RTF1-201ENST00000389629 FOLH1Q04609 750 aa14.74□□□□□ -0.05
RTF1-201ENST00000389629 TTC7BQ86TV6 843 aa14.74□□□□□ -0.05
RTF1-201ENST00000389629 ALLCQ8N6M5 410 aa14.74□□□□□ -0.05
RTF1-201ENST00000389629 MKL1Q969V6 931 aa14.74□□□□□ -0.05
RTF1-201ENST00000389629 VPS39Q96JC1 886 aa14.74□□□□□ -0.05
RTF1-201ENST00000389629 ZFRQ96KR1 1074 aaKnown RBP14.74□□□□□ -0.05
RTF1-201ENST00000389629 BEGAINQ9BUH8 593 aa14.74□□□□□ -0.05
RTF1-201ENST00000389629 THAP1Q9NVV9 213 aa14.74□□□□□ -0.05
RTF1-201ENST00000389629 SLC39A10Q9ULF5 831 aa14.74□□□□□ -0.05
RTF1-201ENST00000389629 GLRA3O75311 464 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms