RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 SNRNP25Q9BV90 132 aaKnown RBP26.3■■□□□ 1.8
SHOX2-201ENST00000389589 KRT82Q9NSB4 513 aa26.3■■□□□ 1.8
SHOX2-201ENST00000389589 ARHGEF37A1IGU5 675 aa26.3■■□□□ 1.8
SHOX2-201ENST00000389589 A6NNZ2 444 aa26.3■■□□□ 1.8
SHOX2-201ENST00000389589 MCF2LO15068 1137 aa26.3■■□□□ 1.8
SHOX2-201ENST00000389589 DAB1O75553 588 aa26.3■■□□□ 1.8
SHOX2-201ENST00000389589 B3GAT3O94766 335 aa26.3■■□□□ 1.8
SHOX2-201ENST00000389589 CYP11A1P05108 521 aa26.3■■□□□ 1.8
SHOX2-201ENST00000389589 GRK4P32298 578 aa26.3■■□□□ 1.8
SHOX2-201ENST00000389589 MRPS5P82675 430 aaKnown RBP26.3■■□□□ 1.8
SHOX2-201ENST00000389589 TUBB8Q3ZCM7 444 aa26.3■■□□□ 1.8
SHOX2-201ENST00000389589 ERMARDQ5T6L9 678 aa26.3■■□□□ 1.8
SHOX2-201ENST00000389589 TRAF7Q6Q0C0 670 aa26.3■■□□□ 1.8
SHOX2-201ENST00000389589 MYCBPAPQ8TBZ2 947 aa26.3■■□□□ 1.8
SHOX2-201ENST00000389589 CENPHQ9H3R5 247 aa26.3■■□□□ 1.8
SHOX2-201ENST00000389589 SAE1Q9UBE0 346 aaPredicted RBP26.3■■□□□ 1.8
SHOX2-201ENST00000389589 INPP5FQ9Y2H2 1132 aa26.3■■□□□ 1.8
SHOX2-201ENST00000389589 TIMM13Q9Y5L4 95 aaPredicted RBP26.3■■□□□ 1.8
SHOX2-201ENST00000389589 FBXO21O94952 628 aa26.29■■□□□ 1.8
SHOX2-201ENST00000389589 IBSPP21815 317 aaPredicted RBP26.29■■□□□ 1.8
SHOX2-201ENST00000389589 CHKAP35790 457 aa26.29■■□□□ 1.8
SHOX2-201ENST00000389589 SKOR1P84550 965 aa26.29■■□□□ 1.8
SHOX2-201ENST00000389589 ADCY1Q08828 1119 aa26.29■■□□□ 1.8
SHOX2-201ENST00000389589 GPS1Q13098 491 aa26.29■■□□□ 1.8
SHOX2-201ENST00000389589 MMRN1Q13201 1228 aa26.29■■□□□ 1.8
SHOX2-201ENST00000389589 CCDC142Q17RM4 750 aa26.29■■□□□ 1.8
SHOX2-201ENST00000389589 FAM35AQ86V20 835 aa26.29■■□□□ 1.8
SHOX2-201ENST00000389589 SIX6OS1Q8N1H7 587 aa26.29■■□□□ 1.8
SHOX2-201ENST00000389589 SH2D3CQ8N5H7 860 aa26.29■■□□□ 1.8
SHOX2-201ENST00000389589 ZNF670Q9BS34 389 aa26.29■■□□□ 1.8
SHOX2-201ENST00000389589 TMEM109Q9BVC6 243 aa26.29■■□□□ 1.8
SHOX2-201ENST00000389589 SEZ6LQ9BYH1 1024 aa26.29■■□□□ 1.8
SHOX2-201ENST00000389589 CDC42EP4Q9H3Q1 356 aaKnown RBP26.29■■□□□ 1.8
SHOX2-201ENST00000389589 PCDH18Q9HCL0 1135 aa26.29■■□□□ 1.8
SHOX2-201ENST00000389589 TPX2Q9ULW0 747 aaKnown RBP26.29■■□□□ 1.8
SHOX2-201ENST00000389589 M0QZQ0 153 aa26.29■■□□□ 1.8
SHOX2-201ENST00000389589 BEST1O76090 585 aa26.29■■□□□ 1.8
SHOX2-201ENST00000389589 VEGFBP49765 207 aa26.29■■□□□ 1.8
SHOX2-201ENST00000389589 EIF3EP60228 445 aaKnown RBP26.29■■□□□ 1.8
SHOX2-201ENST00000389589 KDM7AQ6ZMT4 941 aa26.29■■□□□ 1.8
SHOX2-201ENST00000389589 RELL1Q8IUW5 271 aa26.29■■□□□ 1.8
SHOX2-201ENST00000389589 ZCCHC9Q8N567 271 aaKnown RBP26.29■■□□□ 1.8
SHOX2-201ENST00000389589 GLIS1Q8NBF1 620 aa26.29■■□□□ 1.8
SHOX2-201ENST00000389589 RSAD2Q8WXG1 361 aa26.29■■□□□ 1.8
SHOX2-201ENST00000389589 ACBD6Q9BR61 282 aa26.29■■□□□ 1.8
SHOX2-201ENST00000389589 ADAM7Q9H2U9 754 aa26.29■■□□□ 1.8
SHOX2-201ENST00000389589 PHF24Q9UPV7 400 aa26.29■■□□□ 1.8
SHOX2-201ENST00000389589 MYBPHLA2RUH7 354 aa26.28■■□□□ 1.8
SHOX2-201ENST00000389589 ARVCFO00192 962 aa26.28■■□□□ 1.8
SHOX2-201ENST00000389589 RDXP35241 583 aaKnown RBP26.28■■□□□ 1.8
SHOX2-201ENST00000389589 MAP3K7CLP57077 242 aa26.28■■□□□ 1.8
SHOX2-201ENST00000389589 YWHAZP63104 245 aaKnown RBP26.28■■□□□ 1.8
SHOX2-201ENST00000389589 MORF4L2Q15014 288 aa26.28■■□□□ 1.8
SHOX2-201ENST00000389589 SLC25A52Q3SY17 297 aa26.28■■□□□ 1.8
SHOX2-201ENST00000389589 DCLRE1AQ6PJP8 1040 aa26.28■■□□□ 1.8
SHOX2-201ENST00000389589 SLC24A5Q71RS6 500 aa26.28■■□□□ 1.8
SHOX2-201ENST00000389589 PCGF5Q86SE9 256 aa26.28■■□□□ 1.8
SHOX2-201ENST00000389589 PRUNE1Q86TP1 453 aa26.28■■□□□ 1.8
SHOX2-201ENST00000389589 P3H4Q92791 437 aa26.28■■□□□ 1.8
SHOX2-201ENST00000389589 PCED1BQ96HM7 432 aa26.28■■□□□ 1.8
SHOX2-201ENST00000389589 C9IYK1 514 aa26.27■■□□□ 1.8
SHOX2-201ENST00000389589 AP1G2O75843 785 aa26.27■■□□□ 1.8
SHOX2-201ENST00000389589 ZSCAN5DPP0CG00 497 aa26.27■■□□□ 1.8
SHOX2-201ENST00000389589 CAPN2P17655 700 aa26.27■■□□□ 1.8
SHOX2-201ENST00000389589 NR1D1P20393 614 aa26.27■■□□□ 1.8
SHOX2-201ENST00000389589 TGM2P21980 687 aa26.27■■□□□ 1.8
SHOX2-201ENST00000389589 NOMO1Q15155 1222 aa26.27■■□□□ 1.8
SHOX2-201ENST00000389589 ANKRD20A8PQ5CZ79 823 aa26.27■■□□□ 1.8
SHOX2-201ENST00000389589 ZC3H12AQ5D1E8 599 aaKnown RBP26.27■■□□□ 1.8
SHOX2-201ENST00000389589 FAM149B1Q96BN6 582 aa26.27■■□□□ 1.8
SHOX2-201ENST00000389589 KBTBD13C9JR72 458 aa26.27■■□□□ 1.8
SHOX2-201ENST00000389589 IFNB1P01574 187 aa26.27■■□□□ 1.8
SHOX2-201ENST00000389589 SHBGP04278 402 aa26.27■■□□□ 1.8
SHOX2-201ENST00000389589 PECAM1P16284 738 aaPredicted RBP26.27■■□□□ 1.8
SHOX2-201ENST00000389589 TFE3P19532 575 aaPredicted RBP26.27■■□□□ 1.8
SHOX2-201ENST00000389589 IL4RP24394 825 aa26.27■■□□□ 1.8
SHOX2-201ENST00000389589 DPYSL2Q16555 572 aa26.27■■□□□ 1.8
SHOX2-201ENST00000389589 GLB1LQ6UWU2 654 aa26.27■■□□□ 1.8
SHOX2-201ENST00000389589 DEFB106AQ8N104 65 aa26.27■■□□□ 1.8
SHOX2-201ENST00000389589 FAF2Q96CS3 445 aa26.27■■□□□ 1.8
SHOX2-201ENST00000389589 SMARCD1Q96GM5 515 aa26.27■■□□□ 1.8
SHOX2-201ENST00000389589 GPATCH2LQ9NWQ4 482 aa26.27■■□□□ 1.8
SHOX2-201ENST00000389589 APOL1O14791 398 aa26.26■■□□□ 1.79
SHOX2-201ENST00000389589 RBP3P10745 1247 aa26.26■■□□□ 1.79
SHOX2-201ENST00000389589 ETS1P14921 441 aa26.26■■□□□ 1.79
SHOX2-201ENST00000389589 NOS2P35228 1153 aa26.26■■□□□ 1.79
SHOX2-201ENST00000389589 TKTL1P51854 596 aa26.26■■□□□ 1.79
SHOX2-201ENST00000389589 MBTPS1Q14703 1052 aa26.26■■□□□ 1.79
SHOX2-201ENST00000389589 CD300LGQ6UXG3 332 aa26.26■■□□□ 1.79
SHOX2-201ENST00000389589 ARFGAP2Q8N6H7 521 aa26.26■■□□□ 1.79
SHOX2-201ENST00000389589 ZNF296Q8WUU4 475 aaPredicted RBP26.26■■□□□ 1.79
SHOX2-201ENST00000389589 STAP1Q9ULZ2 295 aa26.26■■□□□ 1.79
SHOX2-201ENST00000389589 SHOX2O60902 331 aaPredicted RBP26.26■■□□□ 1.79
SHOX2-201ENST00000389589 TTC4O95801 387 aa26.26■■□□□ 1.79
SHOX2-201ENST00000389589 STIP1P31948 543 aaKnown RBP26.26■■□□□ 1.79
SHOX2-201ENST00000389589 RTN4RL1Q86UN2 441 aaPredicted RBP26.26■■□□□ 1.79
SHOX2-201ENST00000389589 RSPH1Q8WYR4 309 aa26.26■■□□□ 1.79
SHOX2-201ENST00000389589 SMOQ99835 787 aa26.26■■□□□ 1.79
SHOX2-201ENST00000389589 FTHL17Q9BXU8 183 aa26.26■■□□□ 1.79
SHOX2-201ENST00000389589 BCCIPQ9P287 314 aaKnown RBP eCLIP26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms