RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 SLC10A2Q12908 348 aaPredicted RBP10.61□□□□□ -0.71
LTN1-203ENST00000389195 SV2CQ496J9 727 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 MSS51Q4VC12 460 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 ALS2CLQ60I27 953 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 CD300LGQ6UXG3 332 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 NT5DC4Q86YG4 428 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 C12orf50Q8NA57 414 aaPredicted RBP10.61□□□□□ -0.71
LTN1-203ENST00000389195 DEFB118Q96PH6 123 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 SMOQ99835 787 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 CNPY3Q9BT09 278 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 GDAP2Q9NXN4 497 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 FAM72CH0Y354 149 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 GAS8O95995 478 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 MYZAPP0CAP1 466 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 RBP3P10745 1247 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 GOT1P17174 413 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 AMPD1P23109 780 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 GPR15P49685 360 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 BST2Q10589 180 aaKnown RBP10.61□□□□□ -0.71
LTN1-203ENST00000389195 HADHQ16836 314 aaKnown RBP10.61□□□□□ -0.71
LTN1-203ENST00000389195 FAM72AQ5TYM5 149 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 FAM72DQ6L9T8 149 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 FAM72BQ86X60 149 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 CCDC13Q8IYE1 715 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 CRYBG2Q8N1P7 616 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 TTC9BQ8N6N2 239 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 PCDH19Q8TAB3 1148 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 SNF8Q96H20 258 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 RBM41Q96IZ5 413 aaKnown RBP10.61□□□□□ -0.71
LTN1-203ENST00000389195 ZNF560Q96MR9 790 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 SYT15Q9BQS2 421 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 ULBP1Q9BZM6 244 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 ASNSD1Q9NWL6 643 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 DERAQ9Y315 318 aa10.61□□□□□ -0.71
LTN1-203ENST00000389195 A0A0U1RQF3 1178 aa10.6□□□□□ -0.71
LTN1-203ENST00000389195 RIPK2O43353 540 aa10.6□□□□□ -0.71
LTN1-203ENST00000389195 ALDH1A1P00352 501 aa10.6□□□□□ -0.71
LTN1-203ENST00000389195 CYP2F1P24903 491 aa10.6□□□□□ -0.71
LTN1-203ENST00000389195 MAN1A1P33908 653 aa10.6□□□□□ -0.71
LTN1-203ENST00000389195 OR1G1P47890 313 aa10.6□□□□□ -0.71
LTN1-203ENST00000389195 EIF3EP60228 445 aaKnown RBP10.6□□□□□ -0.71
LTN1-203ENST00000389195 GNGT1P63211 74 aa10.6□□□□□ -0.71
LTN1-203ENST00000389195 OASLQ15646 514 aaKnown RBP10.6□□□□□ -0.71
LTN1-203ENST00000389195 CLLU1OSQ5K130 101 aa10.6□□□□□ -0.71
LTN1-203ENST00000389195 FAM117BQ6P1L5 589 aa10.6□□□□□ -0.71
LTN1-203ENST00000389195 APBB1IPQ7Z5R6 666 aaPredicted RBP10.6□□□□□ -0.71
LTN1-203ENST00000389195 DEFB128Q7Z7B8 93 aa10.6□□□□□ -0.71
LTN1-203ENST00000389195 CYP4X1Q8N118 509 aa10.6□□□□□ -0.71
LTN1-203ENST00000389195 PQLC3Q8N755 202 aa10.6□□□□□ -0.71
LTN1-203ENST00000389195 NIPA2Q8N8Q9 360 aa10.6□□□□□ -0.71
LTN1-203ENST00000389195 LRRC45Q96CN5 670 aa10.6□□□□□ -0.71
LTN1-203ENST00000389195 MAK16Q9BXY0 300 aaKnown RBP10.6□□□□□ -0.71
LTN1-203ENST00000389195 PPP1R12CQ9BZL4 782 aa10.6□□□□□ -0.71
LTN1-203ENST00000389195 PABPC3Q9H361 631 aaKnown RBP10.6□□□□□ -0.71
LTN1-203ENST00000389195 TMBIM4Q9HC24 238 aa10.6□□□□□ -0.71
LTN1-203ENST00000389195 MAGED2Q9UNF1 606 aaPredicted RBP10.6□□□□□ -0.71
LTN1-203ENST00000389195 H7C0C1 242 aa10.6□□□□□ -0.71
LTN1-203ENST00000389195 M0QYT0 321 aa10.6□□□□□ -0.71
LTN1-203ENST00000389195 FYNP06241 537 aa10.6□□□□□ -0.71
LTN1-203ENST00000389195 F7P08709 466 aaPredicted RBP10.6□□□□□ -0.71
LTN1-203ENST00000389195 HSPA6P17066 643 aa10.6□□□□□ -0.71
LTN1-203ENST00000389195 ATP5OP48047 213 aa10.6□□□□□ -0.71
LTN1-203ENST00000389195 BCAT1P54687 386 aa10.6□□□□□ -0.71
LTN1-203ENST00000389195 BASP1P80723 227 aaKnown RBP10.6□□□□□ -0.71
LTN1-203ENST00000389195 OLIG2Q13516 323 aa10.6□□□□□ -0.71
LTN1-203ENST00000389195 GPNMBQ14956 572 aa10.6□□□□□ -0.71
LTN1-203ENST00000389195 TRIM71Q2Q1W2 868 aaKnown RBP10.6□□□□□ -0.71
LTN1-203ENST00000389195 FNBP1LQ5T0N5 605 aa10.6□□□□□ -0.71
LTN1-203ENST00000389195 DENND2CQ68D51 928 aa10.6□□□□□ -0.71
LTN1-203ENST00000389195 DARS2Q6PI48 645 aaKnown RBP10.6□□□□□ -0.71
LTN1-203ENST00000389195 MREGQ8N565 214 aa10.6□□□□□ -0.71
LTN1-203ENST00000389195 DBF4BQ8NFT6 615 aa10.6□□□□□ -0.71
LTN1-203ENST00000389195 CMASQ8NFW8 434 aaPredicted RBP10.6□□□□□ -0.71
LTN1-203ENST00000389195 MGARPQ8TDB4 240 aa10.6□□□□□ -0.71
LTN1-203ENST00000389195 ATP6V1G3Q96LB4 118 aa10.6□□□□□ -0.71
LTN1-203ENST00000389195 RBM15Q96T37 977 aaKnown RBP eCLIP10.6□□□□□ -0.712e-6■■■□□ 15.6
LTN1-203ENST00000389195 SAYSD1Q9NPB0 183 aa10.6□□□□□ -0.71
LTN1-203ENST00000389195 PPANQ9NQ55 473 aaKnown RBP10.6□□□□□ -0.71
LTN1-203ENST00000389195 OPA1O60313 960 aa10.59□□□□□ -0.71
LTN1-203ENST00000389195 STAU1O95793 577 aaKnown RBP10.59□□□□□ -0.71
LTN1-203ENST00000389195 NPR3P17342 541 aa10.59□□□□□ -0.71
LTN1-203ENST00000389195 RBL1P28749 1068 aa10.59□□□□□ -0.71
LTN1-203ENST00000389195 GRK4P32298 578 aa10.59□□□□□ -0.71
LTN1-203ENST00000389195 RPL22P35268 128 aaKnown RBP10.59□□□□□ -0.71
LTN1-203ENST00000389195 SULT1E1P49888 294 aa10.59□□□□□ -0.71
LTN1-203ENST00000389195 VCPP55072 806 aaKnown RBP10.59□□□□□ -0.71
LTN1-203ENST00000389195 PTK6Q13882 451 aa10.59□□□□□ -0.71
LTN1-203ENST00000389195 EFTUD2Q15029 972 aaKnown RBP eCLIP10.59□□□□□ -0.71
LTN1-203ENST00000389195 LRRC14Q15048 493 aa10.59□□□□□ -0.71
LTN1-203ENST00000389195 MAP3K21Q5TCX8 1036 aa10.59□□□□□ -0.71
LTN1-203ENST00000389195 TMEM173Q86WV6 379 aaPredicted RBP10.59□□□□□ -0.71
LTN1-203ENST00000389195 ALLCQ8N6M5 410 aa10.59□□□□□ -0.71
LTN1-203ENST00000389195 PLD5Q8N7P1 536 aa10.59□□□□□ -0.71
LTN1-203ENST00000389195 SLC7A14Q8TBB6 771 aa10.59□□□□□ -0.71
LTN1-203ENST00000389195 CCDC110Q8TBZ0 833 aa10.59□□□□□ -0.71
LTN1-203ENST00000389195 DEPDC1BQ8WUY9 529 aa10.59□□□□□ -0.71
LTN1-203ENST00000389195 LGMNQ99538 433 aa10.59□□□□□ -0.71
LTN1-203ENST00000389195 DUSP16Q9BY84 665 aa10.59□□□□□ -0.71
LTN1-203ENST00000389195 LRRC4Q9HBW1 653 aa10.59□□□□□ -0.71
LTN1-203ENST00000389195 PIGVQ9NUD9 493 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms