RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 KRT9P35527 623 aa17.01■□□□□ 0.31
SNRPB-201ENST00000381342 NHLH1Q02575 133 aa17.01■□□□□ 0.31
SNRPB-201ENST00000381342 PRKCQQ04759 706 aa17.01■□□□□ 0.31
SNRPB-201ENST00000381342 SLC44A4Q53GD3 710 aa17.01■□□□□ 0.31
SNRPB-201ENST00000381342 TANGO2Q6ICL3 276 aa17.01■□□□□ 0.31
SNRPB-201ENST00000381342 CCDC186Q7Z3E2 898 aa17.01■□□□□ 0.31
SNRPB-201ENST00000381342 MON1AQ86VX9 555 aa17.01■□□□□ 0.31
SNRPB-201ENST00000381342 YAF2Q8IY57 180 aa17.01■□□□□ 0.31
SNRPB-201ENST00000381342 SIX6OS1Q8N1H7 587 aa17.01■□□□□ 0.31
SNRPB-201ENST00000381342 TMEM105Q8N8V8 129 aa17.01■□□□□ 0.31
SNRPB-201ENST00000381342 C1orf131Q8NDD1 294 aaKnown RBP17.01■□□□□ 0.31
SNRPB-201ENST00000381342 PRSS33Q8NF86 280 aa17.01■□□□□ 0.31
SNRPB-201ENST00000381342 DDX1Q92499 740 aaKnown RBP17.01■□□□□ 0.31
SNRPB-201ENST00000381342 ATOH1Q92858 354 aaPredicted RBP17.01■□□□□ 0.31
SNRPB-201ENST00000381342 TRMT61BQ9BVS5 477 aaKnown RBP17.01■□□□□ 0.31
SNRPB-201ENST00000381342 BRD9Q9H8M2 597 aa17.01■□□□□ 0.31
SNRPB-201ENST00000381342 TBC1D17Q9HA65 648 aa17.01■□□□□ 0.31
SNRPB-201ENST00000381342 CHORDC1Q9UHD1 332 aaPredicted RBP17.01■□□□□ 0.31
SNRPB-201ENST00000381342 NOCTQ9UK39 431 aaKnown RBP17.01■□□□□ 0.31
SNRPB-201ENST00000381342 USP3Q9Y6I4 520 aa17.01■□□□□ 0.31
SNRPB-201ENST00000381342 A0A1W2PQH9 124 aa17■□□□□ 0.31
SNRPB-201ENST00000381342 KRBA1A5PL33 1030 aa17■□□□□ 0.31
SNRPB-201ENST00000381342 LRRC53A6NM62 1247 aa17■□□□□ 0.31
SNRPB-201ENST00000381342 MMEP08473 750 aa17■□□□□ 0.31
SNRPB-201ENST00000381342 ZDHHC11BP0C7U3 371 aa17■□□□□ 0.31
SNRPB-201ENST00000381342 VIPR2P41587 438 aa17■□□□□ 0.31
SNRPB-201ENST00000381342 PPP3CCP48454 512 aa17■□□□□ 0.31
SNRPB-201ENST00000381342 BHLHA9Q7RTU4 235 aa17■□□□□ 0.31
SNRPB-201ENST00000381342 ARID3BQ8IVW6 561 aaPredicted RBP17■□□□□ 0.31
SNRPB-201ENST00000381342 CMTM8Q8IZV2 173 aa17■□□□□ 0.31
SNRPB-201ENST00000381342 ARL14EPQ8N8R7 260 aaPredicted RBP17■□□□□ 0.31
SNRPB-201ENST00000381342 KCTD13Q8WZ19 329 aa17■□□□□ 0.31
SNRPB-201ENST00000381342 NDRG1Q92597 394 aaKnown RBP17■□□□□ 0.31
SNRPB-201ENST00000381342 RSPRY1Q96DX4 576 aa17■□□□□ 0.31
SNRPB-201ENST00000381342 CYP2S1Q96SQ9 504 aa17■□□□□ 0.31
SNRPB-201ENST00000381342 CCSER2Q9H7U1 834 aa17■□□□□ 0.31
SNRPB-201ENST00000381342 NMUR1Q9HB89 426 aa17■□□□□ 0.31
SNRPB-201ENST00000381342 TLR8Q9NR97 1041 aaKnown RBP17■□□□□ 0.31
SNRPB-201ENST00000381342 ST7Q9NRC1 585 aa17■□□□□ 0.31
SNRPB-201ENST00000381342 OSER1Q9NX31 292 aa17■□□□□ 0.31
SNRPB-201ENST00000381342 SIT1Q9Y3P8 196 aa17■□□□□ 0.31
SNRPB-201ENST00000381342 TICRRQ7Z2Z1 1910 aa17■□□□□ 0.31
SNRPB-201ENST00000381342 COL4A2P08572 1712 aa16.99■□□□□ 0.31
SNRPB-201ENST00000381342 TRAV19A0A0A6YYK7 116 aa16.99■□□□□ 0.31
SNRPB-201ENST00000381342 ZBED1O96006 694 aa16.99■□□□□ 0.31
SNRPB-201ENST00000381342 OAS1P00973 400 aaKnown RBP16.99■□□□□ 0.31
SNRPB-201ENST00000381342 CKMP06732 381 aa16.99■□□□□ 0.31
SNRPB-201ENST00000381342 PSMC3P17980 439 aa16.99■□□□□ 0.31
SNRPB-201ENST00000381342 AVPR1AP37288 418 aa16.99■□□□□ 0.31
SNRPB-201ENST00000381342 PDCLQ13371 301 aa16.99■□□□□ 0.31
SNRPB-201ENST00000381342 MLF2Q15773 248 aaPredicted RBP16.99■□□□□ 0.31
SNRPB-201ENST00000381342 FIGNQ5HY92 759 aa16.99■□□□□ 0.31
SNRPB-201ENST00000381342 E4F1Q66K89 784 aaPredicted RBP16.99■□□□□ 0.31
SNRPB-201ENST00000381342 CWF19L1Q69YN2 538 aaKnown RBP16.99■□□□□ 0.31
SNRPB-201ENST00000381342 SCD5Q86SK9 330 aa16.99■□□□□ 0.31
SNRPB-201ENST00000381342 CLEC4CQ8WTT0 213 aa16.99■□□□□ 0.31
SNRPB-201ENST00000381342 DEPDC1BQ8WUY9 529 aa16.99■□□□□ 0.31
SNRPB-201ENST00000381342 IRF7Q92985 503 aa16.99■□□□□ 0.31
SNRPB-201ENST00000381342 PLA2G2FQ9BZM2 168 aa16.99■□□□□ 0.31
SNRPB-201ENST00000381342 PDCL3Q9H2J4 239 aa16.99■□□□□ 0.31
SNRPB-201ENST00000381342 TRPV4Q9HBA0 871 aa16.99■□□□□ 0.31
SNRPB-201ENST00000381342 TJP2Q9UDY2 1190 aa16.99■□□□□ 0.31
SNRPB-201ENST00000381342 ZMYM5Q9UJ78 669 aa16.99■□□□□ 0.31
SNRPB-201ENST00000381342 NAGPAQ9UK23 515 aa16.99■□□□□ 0.31
SNRPB-201ENST00000381342 MYO6Q9UM54 1294 aa16.99■□□□□ 0.31
SNRPB-201ENST00000381342 CCL26Q9Y258 94 aa16.99■□□□□ 0.31
SNRPB-201ENST00000381342 CEP83Q9Y592 693 aa16.99■□□□□ 0.31
SNRPB-201ENST00000381342 ITIH6Q6UXX5 1313 aa16.98■□□□□ 0.31
SNRPB-201ENST00000381342 E5RJQ4 531 aa16.98■□□□□ 0.31
SNRPB-201ENST00000381342 ZNF263O14978 683 aa16.98■□□□□ 0.31
SNRPB-201ENST00000381342 NCAM2O15394 837 aa16.98■□□□□ 0.31
SNRPB-201ENST00000381342 COCHO43405 550 aa16.98■□□□□ 0.31
SNRPB-201ENST00000381342 GYPCP04921 128 aa16.98■□□□□ 0.31
SNRPB-201ENST00000381342 FERP16591 822 aa16.98■□□□□ 0.31
SNRPB-201ENST00000381342 CHRNB2P17787 502 aa16.98■□□□□ 0.31
SNRPB-201ENST00000381342 DAOAP59103 153 aa16.98■□□□□ 0.31
SNRPB-201ENST00000381342 FMO1Q01740 532 aa16.98■□□□□ 0.31
SNRPB-201ENST00000381342 TCF15Q12870 199 aa16.98■□□□□ 0.31
SNRPB-201ENST00000381342 GRM2Q14416 872 aa16.98■□□□□ 0.31
SNRPB-201ENST00000381342 SNX30Q5VWJ9 437 aa16.98■□□□□ 0.31
SNRPB-201ENST00000381342 SARM1Q6SZW1 724 aa16.98■□□□□ 0.31
SNRPB-201ENST00000381342 VITQ6UXI7 678 aa16.98■□□□□ 0.31
SNRPB-201ENST00000381342 WDTC1Q8N5D0 677 aa16.98■□□□□ 0.31
SNRPB-201ENST00000381342 DTWD2Q8NBA8 298 aa16.98■□□□□ 0.31
SNRPB-201ENST00000381342 USP13Q92995 863 aaPredicted RBP16.98■□□□□ 0.31
SNRPB-201ENST00000381342 HSFY1Q96LI6 401 aa16.98■□□□□ 0.31
SNRPB-201ENST00000381342 CPXM1Q96SM3 734 aa16.98■□□□□ 0.31
SNRPB-201ENST00000381342 NELL2Q99435 816 aa16.98■□□□□ 0.31
SNRPB-201ENST00000381342 MIS12Q9H081 205 aa16.98■□□□□ 0.31
SNRPB-201ENST00000381342 LHX5Q9H2C1 402 aa16.98■□□□□ 0.31
SNRPB-201ENST00000381342 MRPS17Q9Y2R5 130 aaKnown RBP16.98■□□□□ 0.31
SNRPB-201ENST00000381342 TRIOO75962 3097 aa16.98■□□□□ 0.31
SNRPB-201ENST00000381342 ZNF318Q5VUA4 2279 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 KANSL1LA0AUZ9 987 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 SOBPA7XYQ1 873 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 HEPACAM2A8MVW5 462 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 H0Y858 1186 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 PI15O43692 258 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 TLR5O60602 858 aa16.97■□□□□ 0.31
SNRPB-201ENST00000381342 OLFM2O95897 454 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms