RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 KCTD13Q8WZ19 329 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 SMARCD2Q92925 531 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 FAM149B1Q96BN6 582 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 PIWIL1Q96J94 861 aaKnown RBP12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 HSFY1Q96LI6 401 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 NOX5Q96PH1 765 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 AGPAT1Q99943 283 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 LHX5Q9H2C1 402 aa12.32□□□□□ -0.44
DEPDC4-202ENST00000378244 A0A1W2PQJ5 194 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 PAPSS1O43252 624 aaPredicted RBP12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 GRAP2O75791 330 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 PLEKP08567 350 aaPredicted RBP12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 YWHAGP61981 247 aaKnown RBP eCLIP12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 TAF5Q15542 800 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 PTPN20Q4JDL3 420 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 RSRC2Q7L4I2 434 aaKnown RBP12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 CCDC186Q7Z3E2 898 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 RNF135Q8IUD6 432 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 DRC7Q8IY82 874 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 PDZD8Q8NEN9 1154 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 SLC4A5Q9BY07 1137 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 PLA2G2FQ9BZM2 168 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 EDEM3Q9BZQ6 932 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 ZFP14Q9HCL3 533 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 AIPL1Q9NZN9 384 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 EPS15L1Q9UBC2 864 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 MYO6Q9UM54 1294 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 MYO10Q9HD67 2058 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 TRAV19A0A0A6YYK7 116 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 DPYSL4O14531 572 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 COCHO43405 550 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 ADCY5O95622 1261 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 ERBB2P04626 1255 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 RARGP13631 454 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 DAOAP59103 153 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 GRM2Q14416 872 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 C10orf120Q5SQS8 335 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 HECTD3Q5T447 861 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 BSPRYQ5W0U4 402 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 PM20D1Q6GTS8 502 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 ZNF571Q7Z3V5 609 aaPredicted RBP12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 ERICH1Q86X53 443 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 ZNF677Q86XU0 584 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 MIB1Q86YT6 1006 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 USP13Q92995 863 aaPredicted RBP12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 RSPRY1Q96DX4 576 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 LRRC3BQ96PB8 259 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 CNGB3Q9NQW8 809 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 GKN1Q9NS71 199 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 MUTYHQ9UIF7 546 aa12.31□□□□□ -0.44
DEPDC4-202ENST00000378244 NCANO14594 1321 aa12.3□□□□□ -0.44
DEPDC4-202ENST00000378244 C19orf67A6NJJ6 358 aa12.3□□□□□ -0.44
DEPDC4-202ENST00000378244 TPM1P09493 284 aa12.3□□□□□ -0.44
DEPDC4-202ENST00000378244 ZDHHC11BP0C7U3 371 aa12.3□□□□□ -0.44
DEPDC4-202ENST00000378244 MBL2P11226 248 aaPredicted RBP12.3□□□□□ -0.44
DEPDC4-202ENST00000378244 TNFAIP3P21580 790 aa12.3□□□□□ -0.44
DEPDC4-202ENST00000378244 PPP3CCP48454 512 aa12.3□□□□□ -0.44
DEPDC4-202ENST00000378244 RNASE9P60153 205 aaKnown RBP12.3□□□□□ -0.44
DEPDC4-202ENST00000378244 NOMO3P69849 1222 aa12.3□□□□□ -0.44
DEPDC4-202ENST00000378244 ZXDBP98169 803 aa12.3□□□□□ -0.44
DEPDC4-202ENST00000378244 HTR4Q13639 388 aa12.3□□□□□ -0.44
DEPDC4-202ENST00000378244 BTBD8Q5XKL5 378 aa12.3□□□□□ -0.44
DEPDC4-202ENST00000378244 OR6B2Q6IFH4 312 aa12.3□□□□□ -0.44
DEPDC4-202ENST00000378244 TMEM110Q86TL2 294 aa12.3□□□□□ -0.44
DEPDC4-202ENST00000378244 ZDHHC14Q8IZN3 488 aa12.3□□□□□ -0.44
DEPDC4-202ENST00000378244 SPC24Q8NBT2 197 aa12.3□□□□□ -0.44
DEPDC4-202ENST00000378244 IPO4Q8TEX9 1081 aaKnown RBP12.3□□□□□ -0.44
DEPDC4-202ENST00000378244 STK32AQ8WU08 396 aa12.3□□□□□ -0.44
DEPDC4-202ENST00000378244 C11orf70Q9BRQ4 267 aa12.3□□□□□ -0.44
DEPDC4-202ENST00000378244 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.3□□□□□ -0.44
DEPDC4-202ENST00000378244 TDP1Q9NUW8 608 aa12.3□□□□□ -0.44
DEPDC4-202ENST00000378244 ZFP37Q9Y6Q3 630 aaPredicted RBP12.3□□□□□ -0.44
DEPDC4-202ENST00000378244 ZNF638Q14966 1978 aaKnown RBP12.3□□□□□ -0.44
DEPDC4-202ENST00000378244 GREB1Q4ZG55 1949 aa12.29□□□□□ -0.44
DEPDC4-202ENST00000378244 OAS1P00973 400 aaKnown RBP12.29□□□□□ -0.44
DEPDC4-202ENST00000378244 FCARP24071 287 aa12.29□□□□□ -0.44
DEPDC4-202ENST00000378244 EFEMP1Q12805 493 aa12.29□□□□□ -0.44
DEPDC4-202ENST00000378244 MEA1Q16626 185 aa12.29□□□□□ -0.44
DEPDC4-202ENST00000378244 MMS22LQ6ZRQ5 1243 aa12.29□□□□□ -0.44
DEPDC4-202ENST00000378244 BHLHA9Q7RTU4 235 aa12.29□□□□□ -0.44
DEPDC4-202ENST00000378244 SLC44A3Q8N4M1 653 aa12.29□□□□□ -0.44
DEPDC4-202ENST00000378244 OVCA2Q8WZ82 227 aa12.29□□□□□ -0.44
DEPDC4-202ENST00000378244 MRFAP1L1Q96HT8 127 aa12.29□□□□□ -0.44
DEPDC4-202ENST00000378244 ZFYVE19Q96K21 471 aa12.29□□□□□ -0.44
DEPDC4-202ENST00000378244 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.29□□□□□ -0.44
DEPDC4-202ENST00000378244 COMMD8Q9NX08 183 aa12.29□□□□□ -0.44
DEPDC4-202ENST00000378244 TAS2R14Q9NYV8 317 aa12.29□□□□□ -0.44
DEPDC4-202ENST00000378244 ADAMTS1Q9UHI8 967 aa12.29□□□□□ -0.44
DEPDC4-202ENST00000378244 CPQQ9Y646 472 aa12.29□□□□□ -0.44
DEPDC4-202ENST00000378244 HEPACAM2A8MVW5 462 aa12.29□□□□□ -0.44
DEPDC4-202ENST00000378244 GOLGA8SH3BPF8 625 aa12.29□□□□□ -0.44
DEPDC4-202ENST00000378244 NARSO43776 548 aaKnown RBP12.29□□□□□ -0.44
DEPDC4-202ENST00000378244 CYP1A1P04798 512 aaPredicted RBP12.29□□□□□ -0.44
DEPDC4-202ENST00000378244 HMBSP08397 361 aa12.29□□□□□ -0.44
DEPDC4-202ENST00000378244 IRF1P10914 325 aa12.29□□□□□ -0.44
DEPDC4-202ENST00000378244 ATP5C1P36542 298 aaKnown RBP12.29□□□□□ -0.44
DEPDC4-202ENST00000378244 ACADSBP45954 432 aa12.29□□□□□ -0.44
DEPDC4-202ENST00000378244 NSFP46459 744 aaKnown RBP12.29□□□□□ -0.44
DEPDC4-202ENST00000378244 HGSNATQ68CP4 663 aa12.29□□□□□ -0.44
DEPDC4-202ENST00000378244 FAM183BPQ6ZVS7 135 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms