RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 PEX10O60683 326 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 EDF1O60869 148 aaKnown RBP10.64□□□□□ -0.71
TPM3-209ENST00000368527 TGDSO95455 350 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 NPTXRO95502 500 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 VTNP04004 478 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 GJB1P08034 283 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 GNAT1P11488 350 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 MLNP12872 115 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 CCNB1P14635 433 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 EZRP15311 586 aaKnown RBP10.64□□□□□ -0.71
TPM3-209ENST00000368527 KCNE1P15382 129 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 GPX6P59796 221 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 BASP1P80723 227 aaKnown RBP10.64□□□□□ -0.71
TPM3-209ENST00000368527 CDK18Q07002 472 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 DNAJC3Q13217 504 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 MPP2Q14168 576 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 DPYSL2Q16555 572 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 FAM110CQ1W6H9 321 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 SMTNL2Q2TAL5 461 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 BBS9Q3SYG4 887 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 CCDC14Q49A88 953 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 KCNT1Q5JUK3 1230 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 C9orf131Q5VYM1 1079 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 CCDC91Q7Z6B0 441 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 SLC26A11Q86WA9 606 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 UNC45BQ8IWX7 931 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 VPS52Q8N1B4 723 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 PLD5Q8N7P1 536 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 FAM71DQ8N9W8 422 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 GLIS1Q8NBF1 620 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 GDAP1Q8TB36 358 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 UBA3Q8TBC4 463 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 RAB3IL1Q8TBN0 382 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 SLC44A1Q8WWI5 657 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 CENPIQ92674 756 aaPredicted RBP10.64□□□□□ -0.71
TPM3-209ENST00000368527 INPP5DQ92835 1189 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 CPB2Q96IY4 423 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 TINF2Q9BSI4 451 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 NAT9Q9BTE0 207 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 KATNAL1Q9BW62 490 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 TRIM6Q9C030 488 aaPredicted RBP10.64□□□□□ -0.71
TPM3-209ENST00000368527 ADAMTS10Q9H324 1103 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 SNX25Q9H3E2 840 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 PCDH18Q9HCL0 1135 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 SAR1AQ9NR31 198 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.64□□□□□ -0.713e-11■□□□□ 9
TPM3-209ENST00000368527 PHTF1Q9UMS5 762 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 Q9Y3F1 56 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 TEX264Q9Y6I9 313 aa10.64□□□□□ -0.71
TPM3-209ENST00000368527 POLR2AP24928 1970 aaKnown RBP10.64□□□□□ -0.71
TPM3-209ENST00000368527 CCL15-CCL14A0A0B4J2E2 113 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 MBLAC1A4D2B0 266 aaPredicted RBP10.63□□□□□ -0.71
TPM3-209ENST00000368527 KLF11O14901 512 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 KRT38O76015 456 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 WFS1O76024 890 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 SNAI1O95863 264 aaPredicted RBP10.63□□□□□ -0.71
TPM3-209ENST00000368527 F2P00734 622 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 PFKMP08237 780 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 DARSP14868 501 aaKnown RBP10.63□□□□□ -0.71
TPM3-209ENST00000368527 ETS1P14921 441 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 NQO1P15559 274 aaKnown RBP10.63□□□□□ -0.71
TPM3-209ENST00000368527 KRT4P19013 534 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 FDFT1P37268 417 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 ADCYAP1R1P41586 468 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 WDR4P57081 412 aaKnown RBP10.63□□□□□ -0.71
TPM3-209ENST00000368527 ELF3P78545 371 aaPredicted RBP10.63□□□□□ -0.71
TPM3-209ENST00000368527 SLC18A2Q05940 514 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 PKN2Q16513 984 aaKnown RBP10.63□□□□□ -0.71
TPM3-209ENST00000368527 CCL15Q16663 113 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 PARP6Q2NL67 630 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 SLC45A4Q5BKX6 768 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 XKR4Q5GH76 650 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 FBXO47Q5MNV8 452 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 MARCH8Q5T0T0 291 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 TTC39BQ5VTQ0 682 aaPredicted RBP10.63□□□□□ -0.71
TPM3-209ENST00000368527 C9orf57Q5W0N0 161 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 MAP1SQ66K74 1059 aaPredicted RBP10.63□□□□□ -0.71
TPM3-209ENST00000368527 ZNF449Q6P9G9 518 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 ALKAL1Q6UXT8 129 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 PDZD4Q76G19 769 aaPredicted RBP10.63□□□□□ -0.71
TPM3-209ENST00000368527 LIMS2Q7Z4I7 341 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 CDR2LQ86X02 465 aaPredicted RBP10.63□□□□□ -0.71
TPM3-209ENST00000368527 AGGF1Q8N302 714 aaeCLIP10.63□□□□□ -0.711e-7■□□□□ 11.2
TPM3-209ENST00000368527 TOP6BLQ8N6T0 577 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 BANPQ8N9N5 519 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 FAM172AQ8WUF8 416 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 ACSF2Q96CM8 615 aaPredicted RBP10.63□□□□□ -0.71
TPM3-209ENST00000368527 KLHL29Q96CT2 875 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 MAML3Q96JK9 1138 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 PWWP2AQ96N64 755 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 ANKRD27Q96NW4 1050 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 TMEM237Q96Q45 408 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 LRRC37BQ96QE4 947 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 ECT2Q9H8V3 914 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 USP29Q9HBJ7 922 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 NGRNQ9NPE2 291 aaKnown RBP10.63□□□□□ -0.71
TPM3-209ENST00000368527 RAB6BQ9NRW1 208 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 HMGXB4Q9UGU5 601 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 SNX9Q9Y5X1 595 aa10.63□□□□□ -0.71
TPM3-209ENST00000368527 A8MXQ7 604 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms