RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 MCPH1Q8NEM0 835 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 POMGNT1Q8WZA1 660 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 ATP6V0A1Q93050 837 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 ISL2Q96A47 359 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 ZNF653Q96CK0 615 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 CENPHQ9H3R5 247 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 CTDP1Q9Y5B0 961 aaPredicted RBP7.74□□□□□ -1.17
CLCN3-202ENST00000360642 COL11A1P12107 1806 aaPredicted RBP7.74□□□□□ -1.17
CLCN3-202ENST00000360642 FAM229AH3BQW9 127 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 RGS13O14921 159 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 ATP2A1O14983 1001 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 TRAPPC3O43617 180 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 DKC1O60832 514 aaKnown RBP eCLIP7.74□□□□□ -1.17
CLCN3-202ENST00000360642 ERLIN2O94905 339 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 COILP38432 576 aaPredicted RBP7.74□□□□□ -1.17
CLCN3-202ENST00000360642 NBPF12Q5TAG4 269 aaPredicted RBP7.74□□□□□ -1.17
CLCN3-202ENST00000360642 GTF2IRD2BQ6EKJ0 949 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 SWSAP1Q6NVH7 229 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 GTF2IRD2Q86UP8 949 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 SCYL3Q8IZE3 742 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 NSUN6Q8TEA1 469 aaKnown RBP7.74□□□□□ -1.17
CLCN3-202ENST00000360642 SLCO2A1Q92959 643 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 C12orf42Q96LP6 360 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 RUNDC3BQ96NL0 473 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 LRRC19Q9H756 370 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 SSU72Q9NP77 194 aaKnown RBP7.74□□□□□ -1.17
CLCN3-202ENST00000360642 CYP26B1Q9NR63 512 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 C14orf119Q9NWQ9 140 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 PIM2Q9P1W9 311 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 CNOT7Q9UIV1 285 aaKnown RBP7.74□□□□□ -1.17
CLCN3-202ENST00000360642 STYXL1Q9Y6J8 313 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 KIAA1217Q5T5P2 1943 aa7.74□□□□□ -1.17
CLCN3-202ENST00000360642 ARNTLO00327 626 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 SHBGP04278 402 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 FNTAP49354 379 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 RWDD2BP57060 319 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 MAGOHP61326 146 aaKnown RBP7.73□□□□□ -1.17
CLCN3-202ENST00000360642 LBRQ14739 615 aaKnown RBP7.73□□□□□ -1.17
CLCN3-202ENST00000360642 KRT71Q3SY84 523 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 ZNF568Q3ZCX4 644 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 FNDC3BQ53EP0 1204 aaKnown RBP7.73□□□□□ -1.17
CLCN3-202ENST00000360642 C6orf89Q6UWU4 347 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 CCDC60Q8IWA6 550 aaPredicted RBP7.73□□□□□ -1.17
CLCN3-202ENST00000360642 ART4Q93070 314 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 FAM84AQ96KN4 292 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 FAM81BQ96LP2 452 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 GFOD1Q9NXC2 390 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 SAMD15Q9P1V8 674 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 HACL1Q9UJ83 578 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 GMNCA6NCL1 334 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 HNRNPDLO14979 420 aaKnown RBP7.73□□□□□ -1.17
CLCN3-202ENST00000360642 TP73O15350 636 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 SPOPO43791 374 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 CAND2O75155 1236 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 STAM2O75886 525 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 C4BPAP04003 597 aaKnown RBP7.73□□□□□ -1.17
CLCN3-202ENST00000360642 DLATP10515 647 aaKnown RBP7.73□□□□□ -1.17
CLCN3-202ENST00000360642 TMOD1P28289 359 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 ABCD1P33897 745 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 AUHQ13825 339 aaKnown RBP7.73□□□□□ -1.17
CLCN3-202ENST00000360642 TMEM132BQ14DG7 1078 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 SNRNP48Q6IEG0 339 aaKnown RBP7.73□□□□□ -1.17
CLCN3-202ENST00000360642 PGM2Q96G03 612 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 FAM213AQ9BRX8 229 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 PI4K2AQ9BTU6 479 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 TMEM109Q9BVC6 243 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 FAM129AQ9BZQ8 928 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 MAF1Q9H063 256 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 TAOK3Q9H2K8 898 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 AVENQ9NQS1 362 aaPredicted RBP7.73□□□□□ -1.17
CLCN3-202ENST00000360642 BCCIPQ9P287 314 aaKnown RBP eCLIP7.73□□□□□ -1.17
CLCN3-202ENST00000360642 SLC9A2Q9UBY0 812 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 PHIPQ8WWQ0 1821 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 MYPNQ86TC9 1320 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 E7EVH7 732 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 H0Y8X5 98 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 MEFVO15553 781 aaPredicted RBP7.73□□□□□ -1.17
CLCN3-202ENST00000360642 EXTL3O43909 919 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 SCAND1P57086 179 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 ACTR2P61160 394 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 TGFB2P61812 414 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 PRKCEQ02156 737 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 BYSLQ13895 437 aaKnown RBP7.73□□□□□ -1.17
CLCN3-202ENST00000360642 PSMD6Q15008 389 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 ZACNQ401N2 412 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 TNFAIP8L3Q5GJ75 292 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 ZNF677Q86XU0 584 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 MCOLN2Q8IZK6 566 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 FIBCD1Q8N539 461 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 SLC16A10Q8TF71 515 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 CENPTQ96BT3 561 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 CDHR1Q96JP9 859 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 ATP6V0A4Q9HBG4 840 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 AS3MTQ9HBK9 375 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 KIAA1586Q9HCI6 787 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 GP6Q9HCN6 339 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 CYP39A1Q9NYL5 469 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 MTUS1Q9ULD2 1270 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 FZD1Q9UP38 647 aa7.73□□□□□ -1.17
CLCN3-202ENST00000360642 MROH7Q68CQ1 1323 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms