RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 ALOX15BO15296 676 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 NQO1P15559 274 aaKnown RBP11.63□□□□□ -0.55
SSU72-202ENST00000359060 AMPD1P23109 780 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 DEUP1Q05D60 604 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 FAAP100Q0VG06 881 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 TAF1CQ15572 869 aaPredicted RBP11.63□□□□□ -0.55
SSU72-202ENST00000359060 PLEKHH3Q7Z736 793 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 SLC7A14Q8TBB6 771 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 MICAL1Q8TDZ2 1067 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 SLCO2A1Q92959 643 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 NKD2Q969F2 451 aaPredicted RBP11.63□□□□□ -0.55
SSU72-202ENST00000359060 PARK7Q99497 189 aaKnown RBP11.63□□□□□ -0.55
SSU72-202ENST00000359060 MRPL45Q9BRJ2 306 aaKnown RBP11.63□□□□□ -0.55
SSU72-202ENST00000359060 SNRNP25Q9BV90 132 aaKnown RBP11.63□□□□□ -0.55
SSU72-202ENST00000359060 FRMD8P1Q9BZ68 369 aaPredicted RBP11.63□□□□□ -0.55
SSU72-202ENST00000359060 LHX5Q9H2C1 402 aa11.63□□□□□ -0.55
SSU72-202ENST00000359060 G3BP2Q9UN86 482 aaKnown RBP11.63□□□□□ -0.55
SSU72-202ENST00000359060 C22orf31O95567 290 aa11.62□□□□□ -0.55
SSU72-202ENST00000359060 SLC6A3Q01959 620 aa11.62□□□□□ -0.55
SSU72-202ENST00000359060 GAD2Q05329 585 aa11.62□□□□□ -0.55
SSU72-202ENST00000359060 ITKQ08881 620 aa11.62□□□□□ -0.55
SSU72-202ENST00000359060 ACVR2BQ13705 512 aa11.62□□□□□ -0.55
SSU72-202ENST00000359060 PAN2Q504Q3 1202 aaKnown RBP11.62□□□□□ -0.55
SSU72-202ENST00000359060 VSTM1Q6UX27 236 aa11.62□□□□□ -0.55
SSU72-202ENST00000359060 N4BP2L2Q92802 583 aaPredicted RBP11.62□□□□□ -0.55
SSU72-202ENST00000359060 EPB41L4BQ9H329 900 aa11.62□□□□□ -0.55
SSU72-202ENST00000359060 NOP53Q9NZM5 478 aaKnown RBP11.62□□□□□ -0.55
SSU72-202ENST00000359060 GARSP41250 739 aaKnown RBP11.62□□□□□ -0.55
SSU72-202ENST00000359060 BCAT1P54687 386 aa11.62□□□□□ -0.55
SSU72-202ENST00000359060 NLRP9Q7RTR0 991 aa11.62□□□□□ -0.55
SSU72-202ENST00000359060 SMC1BQ8NDV3 1235 aa11.62□□□□□ -0.55
SSU72-202ENST00000359060 CPT1BQ92523 772 aa11.62□□□□□ -0.55
SSU72-202ENST00000359060 PRCCQ92733 491 aaPredicted RBP11.62□□□□□ -0.55
SSU72-202ENST00000359060 RNF157Q96PX1 679 aa11.62□□□□□ -0.55
SSU72-202ENST00000359060 ABHD16BQ9H3Z7 469 aa11.62□□□□□ -0.55
SSU72-202ENST00000359060 PDE4DIPQ5VU43 2346 aa11.62□□□□□ -0.55
SSU72-202ENST00000359060 BRWD3Q6RI45 1802 aa11.62□□□□□ -0.55
SSU72-202ENST00000359060 SMAPO00193 183 aa11.62□□□□□ -0.55
SSU72-202ENST00000359060 BAG2O95816 211 aa11.62□□□□□ -0.55
SSU72-202ENST00000359060 GHRP10912 638 aa11.62□□□□□ -0.55
SSU72-202ENST00000359060 KCNJ2P63252 427 aa11.62□□□□□ -0.55
SSU72-202ENST00000359060 MUM1Q2TAK8 710 aa11.62□□□□□ -0.55
SSU72-202ENST00000359060 RNASEH2BQ5TBB1 312 aaKnown RBP11.62□□□□□ -0.55
SSU72-202ENST00000359060 ADAM32Q8TC27 787 aa11.62□□□□□ -0.55
SSU72-202ENST00000359060 CCT6BQ92526 530 aa11.62□□□□□ -0.55
SSU72-202ENST00000359060 TXLNGYQ9BZA5 131 aa11.62□□□□□ -0.55
SSU72-202ENST00000359060 PPP1R12CQ9BZL4 782 aa11.62□□□□□ -0.55
SSU72-202ENST00000359060 NXF3Q9H4D5 531 aaKnown RBP11.62□□□□□ -0.55
SSU72-202ENST00000359060 RXFP1Q9HBX9 757 aa11.62□□□□□ -0.55
SSU72-202ENST00000359060 ZFATQ9P243 1243 aa11.62□□□□□ -0.55
SSU72-202ENST00000359060 TUBGCP4Q9UGJ1 667 aa11.62□□□□□ -0.55
SSU72-202ENST00000359060 SIX4Q9UIU6 781 aa11.62□□□□□ -0.55
SSU72-202ENST00000359060 TRIM33Q9UPN9 1127 aa11.62□□□□□ -0.55
SSU72-202ENST00000359060 ATP5HO75947 161 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 CELF2O95319 508 aaKnown RBP11.61□□□□□ -0.55
SSU72-202ENST00000359060 ABHD2P08910 425 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 ZBTB48P10074 688 aaPredicted RBP11.61□□□□□ -0.55
SSU72-202ENST00000359060 GNAT1P11488 350 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 TYK2P29597 1187 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 GTF2A2P52657 109 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 KLF1Q13351 362 aaPredicted RBP11.61□□□□□ -0.55
SSU72-202ENST00000359060 ARL13BQ3SXY8 428 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 FNBP1LQ5T0N5 605 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 KCNT2Q6UVM3 1135 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 ADGRF2Q8IZF7 708 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 ZNF317Q96PQ6 595 aaPredicted RBP11.61□□□□□ -0.55
SSU72-202ENST00000359060 TMEM237Q96Q45 408 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 LPIN3Q9BQK8 851 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 SDCBP2Q9H190 292 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 GOLGA2P5Q9HBQ8 144 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 LRRC37AA6NMS7 1700 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 STRNO43815 780 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 GSTA1P08263 222 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 BGNP21810 368 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 BEX3Q00994 111 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 ADIGQ0VDE8 80 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 EFHC1Q5JVL4 640 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 PMF1Q6P1K2 205 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 METTL23Q86XA0 190 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 OLIG1Q8TAK6 271 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 GTF3C2Q8WUA4 911 aaPredicted RBP11.61□□□□□ -0.55
SSU72-202ENST00000359060 ZNF75CPQ92670 426 aaPredicted RBP11.61□□□□□ -0.55
SSU72-202ENST00000359060 XYLT2Q9H1B5 865 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 SPAG6O75602 509 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 SRGAP2BP0DMP2 458 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 CPA2P48052 419 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 TPI1P60174 286 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 BST2Q10589 180 aaKnown RBP11.61□□□□□ -0.55
SSU72-202ENST00000359060 ACAP1Q15027 740 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 MTFR1Q15390 333 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 SV2CQ496J9 727 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 ILDR2Q71H61 639 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 MTDHQ86UE4 582 aaKnown RBP11.61□□□□□ -0.55
SSU72-202ENST00000359060 WDTC1Q8N5D0 677 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 BFARQ9NZS9 450 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 HEY2Q9UBP5 337 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 C2CD2Q9Y426 696 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 L3MBTL1Q9Y468 752 aa11.61□□□□□ -0.55
SSU72-202ENST00000359060 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.6□□□□□ -0.55
SSU72-202ENST00000359060 KPNA7A9QM74 516 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms