RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 SPATA16Q9BXB7 569 aa11.87□□□□□ -0.51
CAPN9-202ENST00000354537 MIS12Q9H081 205 aa11.87□□□□□ -0.51
CAPN9-202ENST00000354537 THAP1Q9NVV9 213 aa11.87□□□□□ -0.51
CAPN9-202ENST00000354537 HBS1LQ9Y450 684 aaKnown RBP11.87□□□□□ -0.51
CAPN9-202ENST00000354537 CTDP1Q9Y5B0 961 aaPredicted RBP11.87□□□□□ -0.51
CAPN9-202ENST00000354537 H0YIN7 160 aa11.87□□□□□ -0.51
CAPN9-202ENST00000354537 CCNT2O60583 730 aaKnown RBP11.87□□□□□ -0.51
CAPN9-202ENST00000354537 CST3P01034 146 aaPredicted RBP11.87□□□□□ -0.51
CAPN9-202ENST00000354537 SUPT20HL2P0C7V6 817 aa11.87□□□□□ -0.51
CAPN9-202ENST00000354537 ACTR2P61160 394 aa11.87□□□□□ -0.51
CAPN9-202ENST00000354537 DUOXA2Q1HG44 320 aa11.87□□□□□ -0.51
CAPN9-202ENST00000354537 SUPT20HL1Q3ZLR7 823 aa11.87□□□□□ -0.51
CAPN9-202ENST00000354537 LIN52Q52LA3 116 aa11.87□□□□□ -0.51
CAPN9-202ENST00000354537 MAP3K21Q5TCX8 1036 aa11.87□□□□□ -0.51
CAPN9-202ENST00000354537 C1orf146Q5VVC0 180 aa11.87□□□□□ -0.51
CAPN9-202ENST00000354537 DARS2Q6PI48 645 aaKnown RBP11.87□□□□□ -0.51
CAPN9-202ENST00000354537 CDHR3Q6ZTQ4 885 aa11.87□□□□□ -0.51
CAPN9-202ENST00000354537 ILDR2Q71H61 639 aa11.87□□□□□ -0.51
CAPN9-202ENST00000354537 ARID3BQ8IVW6 561 aaPredicted RBP11.87□□□□□ -0.51
CAPN9-202ENST00000354537 CCDC60Q8IWA6 550 aaPredicted RBP11.87□□□□□ -0.51
CAPN9-202ENST00000354537 FLAD1Q8NFF5 587 aa11.87□□□□□ -0.51
CAPN9-202ENST00000354537 FAM172AQ8WUF8 416 aa11.87□□□□□ -0.51
CAPN9-202ENST00000354537 ZBTB45Q96K62 511 aaPredicted RBP11.87□□□□□ -0.51
CAPN9-202ENST00000354537 ACAP3Q96P50 834 aa11.87□□□□□ -0.51
CAPN9-202ENST00000354537 HAPLN3Q96S86 360 aa11.87□□□□□ -0.51
CAPN9-202ENST00000354537 GMLQ99445 158 aa11.87□□□□□ -0.51
CAPN9-202ENST00000354537 THTPAQ9BU02 230 aa11.87□□□□□ -0.51
CAPN9-202ENST00000354537 TARS2Q9BW92 718 aaKnown RBP11.87□□□□□ -0.51
CAPN9-202ENST00000354537 NIFKQ9BYG3 293 aaKnown RBP11.87□□□□□ -0.51
CAPN9-202ENST00000354537 EPB41L1Q9H4G0 881 aa11.87□□□□□ -0.51
CAPN9-202ENST00000354537 S100A14Q9HCY8 104 aa11.87□□□□□ -0.51
CAPN9-202ENST00000354537 ASNSD1Q9NWL6 643 aa11.87□□□□□ -0.51
CAPN9-202ENST00000354537 STK32BQ9NY57 414 aa11.87□□□□□ -0.51
CAPN9-202ENST00000354537 PSME4Q14997 1843 aa11.87□□□□□ -0.51
CAPN9-202ENST00000354537 CLRN2A0PK11 232 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 PEX1O43933 1283 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 GSTT1P30711 240 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 CPOXP36551 454 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 GABRB2P47870 512 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 AQP5P55064 265 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 PSMC1P62191 440 aaKnown RBP11.86□□□□□ -0.51
CAPN9-202ENST00000354537 YWHAZP63104 245 aaKnown RBP11.86□□□□□ -0.51
CAPN9-202ENST00000354537 MRPS5P82675 430 aaKnown RBP11.86□□□□□ -0.51
CAPN9-202ENST00000354537 ASPHQ12797 758 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 CDC16Q13042 620 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 GRM2Q14416 872 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 PTPN20Q4JDL3 420 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 PDSS2Q86YH6 399 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 CCNJLQ8IV13 435 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 JOSD2Q8TAC2 188 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 NSUN6Q8TEA1 469 aaKnown RBP11.86□□□□□ -0.51
CAPN9-202ENST00000354537 TFAP2BQ92481 460 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 FAF2Q96CS3 445 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 POPDC2Q9HBU9 364 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 FBXO40Q9UH90 709 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 ITGA11Q9UKX5 1188 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 A0A088AWK7 358 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 YDJCA8MPS7 323 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 SPATA31C2B4DYI2 1134 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 PABPC4LP0CB38 370 aaKnown RBP11.86□□□□□ -0.51
CAPN9-202ENST00000354537 OSBPP22059 807 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 MYL6P60660 151 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 BTKQ06187 659 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 STX3Q13277 289 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 HIC1Q14526 733 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 CHI3L2Q15782 390 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 CNPY1Q3B7I2 92 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 MTERF2Q49AM1 385 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 EFHC1Q5JVL4 640 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 ZBTB41Q5SVQ8 909 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 CYP4A22Q5TCH4 519 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 DENND1BQ6P3S1 775 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 KIAA0319LQ8IZA0 1049 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 NME8Q8N427 588 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 PPM1NQ8N819 430 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 ACMSDQ8TDX5 336 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 MCRS1Q96EZ8 462 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 NLRP4Q96MN2 994 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 C10orf88Q9H8K7 445 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 HOMER2Q9NSB8 354 aa11.86□□□□□ -0.51
CAPN9-202ENST00000354537 ZC3H7BQ9UGR2 993 aaKnown RBP11.86□□□□□ -0.51
CAPN9-202ENST00000354537 MAFBQ9Y5Q3 323 aaPredicted RBP11.86□□□□□ -0.51
CAPN9-202ENST00000354537 SMIM31A0A1B0GVY4 71 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 BCLAF3A2AJT9 711 aaKnown RBP11.85□□□□□ -0.51
CAPN9-202ENST00000354537 C2orf71A6NGG8 1288 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 AP1G1O43747 822 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 ADCY3O60266 1144 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 TOMM70O94826 608 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 APOEP02649 317 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 MIPP30301 263 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 EFNA5P52803 228 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 OAZ1P54368 228 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 TRPC3Q13507 836 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 BAATQ14032 418 aaPredicted RBP11.85□□□□□ -0.51
CAPN9-202ENST00000354537 RASIP1Q5U651 963 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 MARK2Q7KZI7 788 aaKnown RBP11.85□□□□□ -0.51
CAPN9-202ENST00000354537 NCAPG2Q86XI2 1143 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 XYLT1Q86Y38 959 aa11.85□□□□□ -0.51
CAPN9-202ENST00000354537 WDR75Q8IWA0 830 aaKnown RBP11.85□□□□□ -0.51
CAPN9-202ENST00000354537 DRAXINQ8NBI3 349 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms