RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 TRIM32Q13049 653 aa16.23■□□□□ 0.19
MBD1-205ENST00000353909 ANKRD20A8PQ5CZ79 823 aa16.23■□□□□ 0.19
MBD1-205ENST00000353909 KIAA0319Q5VV43 1072 aa16.23■□□□□ 0.19
MBD1-205ENST00000353909 RGMBQ6NW40 437 aa16.23■□□□□ 0.19
MBD1-205ENST00000353909 C6orf89Q6UWU4 347 aa16.23■□□□□ 0.19
MBD1-205ENST00000353909 CENPUQ71F23 418 aa16.23■□□□□ 0.19
MBD1-205ENST00000353909 FOXP3Q9BZS1 431 aa16.23■□□□□ 0.19
MBD1-205ENST00000353909 A0A087WUV0 522 aaPredicted RBP16.22■□□□□ 0.19
MBD1-205ENST00000353909 SETSIPP0DME0 302 aa16.22■□□□□ 0.19
MBD1-205ENST00000353909 NBPF20Q3BBV1 942 aa16.22■□□□□ 0.19
MBD1-205ENST00000353909 WSCD1Q658N2 575 aa16.22■□□□□ 0.19
MBD1-205ENST00000353909 GDF6Q6KF10 455 aaPredicted RBP16.22■□□□□ 0.19
MBD1-205ENST00000353909 FUKQ8N0W3 1084 aa16.22■□□□□ 0.19
MBD1-205ENST00000353909 GDAP1Q8TB36 358 aa16.22■□□□□ 0.19
MBD1-205ENST00000353909 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.22■□□□□ 0.19
MBD1-205ENST00000353909 USP29Q9HBJ7 922 aa16.22■□□□□ 0.19
MBD1-205ENST00000353909 UBN1Q9NPG3 1134 aa16.22■□□□□ 0.19
MBD1-205ENST00000353909 LGALS13Q9UHV8 139 aa16.22■□□□□ 0.19
MBD1-205ENST00000353909 TIMM13Q9Y5L4 95 aaPredicted RBP16.22■□□□□ 0.19
MBD1-205ENST00000353909 NR2E3Q9Y5X4 410 aa16.22■□□□□ 0.19
MBD1-205ENST00000353909 CDY2AQ9Y6F7 541 aa16.22■□□□□ 0.19
MBD1-205ENST00000353909 H7C0C1 242 aa16.22■□□□□ 0.19
MBD1-205ENST00000353909 MYCNP04198 464 aaPredicted RBP16.22■□□□□ 0.19
MBD1-205ENST00000353909 ABHD2P08910 425 aa16.22■□□□□ 0.19
MBD1-205ENST00000353909 MLH1P40692 756 aa16.22■□□□□ 0.19
MBD1-205ENST00000353909 ATP5OP48047 213 aa16.22■□□□□ 0.19
MBD1-205ENST00000353909 NDUFV1P49821 464 aa16.22■□□□□ 0.19
MBD1-205ENST00000353909 BCAT1P54687 386 aa16.22■□□□□ 0.19
MBD1-205ENST00000353909 ROR1Q01973 937 aa16.22■□□□□ 0.19
MBD1-205ENST00000353909 IRF5Q13568 498 aa16.22■□□□□ 0.19
MBD1-205ENST00000353909 BOLA3Q53S33 107 aa16.22■□□□□ 0.19
MBD1-205ENST00000353909 FAXCQ5TGI0 409 aa16.22■□□□□ 0.19
MBD1-205ENST00000353909 LIMS2Q7Z4I7 341 aa16.22■□□□□ 0.19
MBD1-205ENST00000353909 PIGZQ86VD9 579 aa16.22■□□□□ 0.19
MBD1-205ENST00000353909 TAX1BP1Q86VP1 789 aa16.22■□□□□ 0.19
MBD1-205ENST00000353909 IGDCC3Q8IVU1 814 aa16.22■□□□□ 0.19
MBD1-205ENST00000353909 CCDC185Q8N715 623 aa16.22■□□□□ 0.19
MBD1-205ENST00000353909 NETO2Q8NC67 525 aa16.22■□□□□ 0.19
MBD1-205ENST00000353909 STK32AQ8WU08 396 aa16.22■□□□□ 0.19
MBD1-205ENST00000353909 C11orf84Q9BUA3 381 aaPredicted RBP16.22■□□□□ 0.19
MBD1-205ENST00000353909 TMPRSS4Q9NRS4 437 aa16.22■□□□□ 0.19
MBD1-205ENST00000353909 XPO7Q9UIA9 1087 aaKnown RBP16.22■□□□□ 0.19
MBD1-205ENST00000353909 GABRQQ9UN88 632 aa16.22■□□□□ 0.19
MBD1-205ENST00000353909 HUS1O60921 280 aa16.21■□□□□ 0.19
MBD1-205ENST00000353909 AVILO75366 819 aa16.21■□□□□ 0.19
MBD1-205ENST00000353909 AKR1A1P14550 325 aa16.21■□□□□ 0.19
MBD1-205ENST00000353909 PAQR9Q6ZVX9 377 aa16.21■□□□□ 0.19
MBD1-205ENST00000353909 PYROXD2Q8N2H3 581 aa16.21■□□□□ 0.19
MBD1-205ENST00000353909 B3GALNT2Q8NCR0 500 aa16.21■□□□□ 0.19
MBD1-205ENST00000353909 TRIB2Q92519 343 aa16.21■□□□□ 0.19
MBD1-205ENST00000353909 ZNF560Q96MR9 790 aa16.21■□□□□ 0.19
MBD1-205ENST00000353909 GAD1Q99259 594 aa16.21■□□□□ 0.19
MBD1-205ENST00000353909 KATNAL1Q9BW62 490 aa16.21■□□□□ 0.19
MBD1-205ENST00000353909 MIOSQ9NXC5 875 aa16.21■□□□□ 0.19
MBD1-205ENST00000353909 ST3GAL5Q9UNP4 418 aa16.21■□□□□ 0.19
MBD1-205ENST00000353909 MFHAS1Q9Y4C4 1052 aa16.21■□□□□ 0.19
MBD1-205ENST00000353909 MYO18AQ92614 2054 aaKnown RBP16.21■□□□□ 0.19
MBD1-205ENST00000353909 RASA4BC9J798 803 aa16.21■□□□□ 0.19
MBD1-205ENST00000353909 RASA4O43374 803 aa16.21■□□□□ 0.19
MBD1-205ENST00000353909 VIMP08670 466 aaKnown RBP16.21■□□□□ 0.19
MBD1-205ENST00000353909 RBL1P28749 1068 aa16.21■□□□□ 0.19
MBD1-205ENST00000353909 PKN2Q16513 984 aaKnown RBP16.21■□□□□ 0.19
MBD1-205ENST00000353909 BBS9Q3SYG4 887 aa16.21■□□□□ 0.19
MBD1-205ENST00000353909 FAM47CQ5HY64 1035 aa16.21■□□□□ 0.19
MBD1-205ENST00000353909 SLC26A9Q7LBE3 791 aa16.21■□□□□ 0.19
MBD1-205ENST00000353909 PPP1R10Q96QC0 940 aaKnown RBP16.21■□□□□ 0.19
MBD1-205ENST00000353909 CCDC77Q9BR77 488 aa16.21■□□□□ 0.19
MBD1-205ENST00000353909 PAAF1Q9BRP4 392 aa16.21■□□□□ 0.19
MBD1-205ENST00000353909 DHX35Q9H5Z1 703 aaKnown RBP16.21■□□□□ 0.19
MBD1-205ENST00000353909 ZNF638Q14966 1978 aaKnown RBP16.21■□□□□ 0.18
MBD1-205ENST00000353909 CYB561D2O14569 222 aa16.2■□□□□ 0.18
MBD1-205ENST00000353909 SPAG7O75391 227 aa16.2■□□□□ 0.18
MBD1-205ENST00000353909 CHRNA1P02708 482 aa16.2■□□□□ 0.18
MBD1-205ENST00000353909 BCAR1P56945 870 aa16.2■□□□□ 0.18
MBD1-205ENST00000353909 CAP1Q01518 475 aa16.2■□□□□ 0.18
MBD1-205ENST00000353909 GBE1Q04446 702 aa16.2■□□□□ 0.18
MBD1-205ENST00000353909 ADIGQ0VDE8 80 aa16.2■□□□□ 0.18
MBD1-205ENST00000353909 SLC10A2Q12908 348 aaPredicted RBP16.2■□□□□ 0.18
MBD1-205ENST00000353909 RNF187Q5TA31 235 aaPredicted RBP16.2■□□□□ 0.18
MBD1-205ENST00000353909 FBXO36Q8NEA4 188 aa16.2■□□□□ 0.18
MBD1-205ENST00000353909 TBCBQ99426 244 aa16.2■□□□□ 0.18
MBD1-205ENST00000353909 FRMD8P1Q9BZ68 369 aaPredicted RBP16.2■□□□□ 0.18
MBD1-205ENST00000353909 MTMR10Q9NXD2 777 aa16.2■□□□□ 0.18
MBD1-205ENST00000353909 Q9Y3F1 56 aa16.2■□□□□ 0.18
MBD1-205ENST00000353909 DCAF8L1A6NGE4 600 aa16.2■□□□□ 0.18
MBD1-205ENST00000353909 KCNN4O15554 427 aa16.2■□□□□ 0.18
MBD1-205ENST00000353909 L1CAMP32004 1257 aa16.2■□□□□ 0.18
MBD1-205ENST00000353909 MRPS6P82932 125 aaKnown RBP16.2■□□□□ 0.18
MBD1-205ENST00000353909 TFDP2Q14188 446 aa16.2■□□□□ 0.18
MBD1-205ENST00000353909 SV2CQ496J9 727 aa16.2■□□□□ 0.18
MBD1-205ENST00000353909 GKAP1Q5VSY0 366 aaPredicted RBP16.2■□□□□ 0.18
MBD1-205ENST00000353909 CTU1Q7Z7A3 348 aaKnown RBP16.2■□□□□ 0.18
MBD1-205ENST00000353909 FAM131BQ86XD5 332 aa16.2■□□□□ 0.18
MBD1-205ENST00000353909 AGGF1Q8N302 714 aaeCLIP16.2■□□□□ 0.18
MBD1-205ENST00000353909 C3orf58Q8NDZ4 430 aa16.2■□□□□ 0.18
MBD1-205ENST00000353909 PYROXD1Q8WU10 500 aa16.2■□□□□ 0.18
MBD1-205ENST00000353909 DYDC1Q8WWB3 177 aa16.2■□□□□ 0.18
MBD1-205ENST00000353909 CABS1Q96KC9 395 aa16.2■□□□□ 0.18
MBD1-205ENST00000353909 SCN10AQ9Y5Y9 1956 aa16.2■□□□□ 0.18
MBD1-205ENST00000353909 DUSP11O75319 330 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms