RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 SUN2Q9UH99 717 aa14.2□□□□□ -0.14
SMC6-201ENST00000351948 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.2□□□□□ -0.14
SMC6-201ENST00000351948 STX7O15400 261 aaKnown RBP14.2□□□□□ -0.14
SMC6-201ENST00000351948 DARSP14868 501 aaKnown RBP14.2□□□□□ -0.14
SMC6-201ENST00000351948 TUBP50607 506 aa14.2□□□□□ -0.14
SMC6-201ENST00000351948 SLC6A3Q01959 620 aa14.2□□□□□ -0.14
SMC6-201ENST00000351948 ZNF268Q14587 947 aaPredicted RBP14.2□□□□□ -0.14
SMC6-201ENST00000351948 LNX1Q8TBB1 728 aaPredicted RBP14.2□□□□□ -0.14
SMC6-201ENST00000351948 EIF2AQ9BY44 585 aaKnown RBP14.2□□□□□ -0.14
SMC6-201ENST00000351948 ELOVL4Q9GZR5 314 aa14.2□□□□□ -0.14
SMC6-201ENST00000351948 CHST12Q9NRB3 414 aa14.2□□□□□ -0.14
SMC6-201ENST00000351948 PHRF1Q9P1Y6 1649 aaKnown RBP14.2□□□□□ -0.14
SMC6-201ENST00000351948 PSMC3IPQ9P2W1 217 aaPredicted RBP14.2□□□□□ -0.14
SMC6-201ENST00000351948 VANGL2Q9ULK5 521 aa14.2□□□□□ -0.14
SMC6-201ENST00000351948 GLI1P08151 1106 aa14.2□□□□□ -0.14
SMC6-201ENST00000351948 CHN1P15882 459 aa14.2□□□□□ -0.14
SMC6-201ENST00000351948 TPH1P17752 444 aa14.2□□□□□ -0.14
SMC6-201ENST00000351948 PTRHD1Q6GMV3 140 aaKnown RBP14.2□□□□□ -0.14
SMC6-201ENST00000351948 C11orf63Q6NUN7 778 aa14.2□□□□□ -0.14
SMC6-201ENST00000351948 PIGZQ86VD9 579 aa14.2□□□□□ -0.14
SMC6-201ENST00000351948 FBXO36Q8NEA4 188 aa14.2□□□□□ -0.14
SMC6-201ENST00000351948 LTFP02788 710 aa14.19□□□□□ -0.14
SMC6-201ENST00000351948 SYTL3Q4VX76 610 aa14.19□□□□□ -0.14
SMC6-201ENST00000351948 C16orf59Q7L2K0 433 aa14.19□□□□□ -0.14
SMC6-201ENST00000351948 SNX19Q92543 992 aa14.19□□□□□ -0.14
SMC6-201ENST00000351948 TRMT13Q9NUP7 481 aaKnown RBP14.19□□□□□ -0.14
SMC6-201ENST00000351948 PADI3Q9ULW8 664 aa14.19□□□□□ -0.14
SMC6-201ENST00000351948 RRP15Q9Y3B9 282 aaKnown RBP14.19□□□□□ -0.14
SMC6-201ENST00000351948 OTOP2Q7RTS6 562 aa14.19□□□□□ -0.14
SMC6-201ENST00000351948 NT5DC4Q86YG4 428 aa14.19□□□□□ -0.14
SMC6-201ENST00000351948 IFNL1Q8IU54 200 aa14.19□□□□□ -0.14
SMC6-201ENST00000351948 B3GALNT2Q8NCR0 500 aa14.19□□□□□ -0.14
SMC6-201ENST00000351948 HDAC7Q8WUI4 952 aa14.19□□□□□ -0.14
SMC6-201ENST00000351948 C12orf42Q96LP6 360 aa14.19□□□□□ -0.14
SMC6-201ENST00000351948 A0A0B4J269 797 aa14.19□□□□□ -0.14
SMC6-201ENST00000351948 RCCD1A6NED2 376 aa14.19□□□□□ -0.14
SMC6-201ENST00000351948 PHF20L1A8MW92 1017 aa14.19□□□□□ -0.14
SMC6-201ENST00000351948 GSTA4O15217 222 aa14.19□□□□□ -0.14
SMC6-201ENST00000351948 HSD17B3P37058 310 aa14.19□□□□□ -0.14
SMC6-201ENST00000351948 ARFIP2P53365 341 aa14.19□□□□□ -0.14
SMC6-201ENST00000351948 E2F5Q15329 346 aa14.19□□□□□ -0.14
SMC6-201ENST00000351948 MAP3K21Q5TCX8 1036 aa14.19□□□□□ -0.14
SMC6-201ENST00000351948 TPGS1Q6ZTW0 290 aa14.19□□□□□ -0.14
SMC6-201ENST00000351948 TRIM54Q9BYV2 358 aa14.19□□□□□ -0.14
SMC6-201ENST00000351948 TKTL2Q9H0I9 626 aa14.19□□□□□ -0.14
SMC6-201ENST00000351948 SYNDIG1Q9H7V2 258 aa14.19□□□□□ -0.14
SMC6-201ENST00000351948 RBM22Q9NW64 420 aaKnown RBP eCLIP14.19□□□□□ -0.149e-20■■■■■ 33.3
SMC6-201ENST00000351948 A0A0A6YYK5 440 aaPredicted RBP14.19□□□□□ -0.14
SMC6-201ENST00000351948 MTSS1O43312 755 aa14.19□□□□□ -0.14
SMC6-201ENST00000351948 CST3P01034 146 aaPredicted RBP14.19□□□□□ -0.14
SMC6-201ENST00000351948 SERPIND1P05546 499 aa14.19□□□□□ -0.14
SMC6-201ENST00000351948 OR1E1P30953 314 aa14.19□□□□□ -0.14
SMC6-201ENST00000351948 SP2Q02086 613 aa14.19□□□□□ -0.14
SMC6-201ENST00000351948 POLD3Q15054 466 aaPredicted RBP14.19□□□□□ -0.14
SMC6-201ENST00000351948 DDR2Q16832 855 aa14.19□□□□□ -0.14
SMC6-201ENST00000351948 NOL9Q5SY16 702 aaKnown RBP14.19□□□□□ -0.14
SMC6-201ENST00000351948 SPATA24Q86W54 205 aa14.19□□□□□ -0.14
SMC6-201ENST00000351948 LMNTD2Q8IXW0 634 aa14.19□□□□□ -0.14
SMC6-201ENST00000351948 MDM1Q8TC05 714 aa14.19□□□□□ -0.14
SMC6-201ENST00000351948 EPS8L3Q8TE67 593 aaKnown RBP14.19□□□□□ -0.14
SMC6-201ENST00000351948 N4BP2L2Q92802 583 aaPredicted RBP14.19□□□□□ -0.14
SMC6-201ENST00000351948 FBXO44Q9H4M3 255 aa14.19□□□□□ -0.14
SMC6-201ENST00000351948 CCDC85CA6NKD9 419 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 ARIH2O95376 493 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 INHAP05111 366 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 CKBP12277 381 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 HSPA9P38646 679 aaKnown RBP14.18□□□□□ -0.14
SMC6-201ENST00000351948 MEA1Q16626 185 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 ACAD11Q709F0 780 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 SLC9A9Q8IVB4 645 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 MRPL45Q9BRJ2 306 aaKnown RBP14.18□□□□□ -0.14
SMC6-201ENST00000351948 UNKQ9C0B0 810 aaKnown RBP14.18□□□□□ -0.14
SMC6-201ENST00000351948 LRRC37A3O60309 1634 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 CA12O43570 354 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 SMIM24O75264 130 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 DUSP11O75319 330 aaKnown RBP14.18□□□□□ -0.14
SMC6-201ENST00000351948 OR4Q2P0C623 313 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 RHOAP61586 193 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 ADCK2Q7Z695 626 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 RBM23Q86U06 439 aaKnown RBP14.18□□□□□ -0.14
SMC6-201ENST00000351948 BAP1Q92560 729 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 SHCBP1LQ9BZQ2 653 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 TRIM49D1C9J1S8 452 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 GNGT2O14610 69 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 KIF3CO14782 793 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 NOL3O60936 208 aaKnown RBP14.18□□□□□ -0.14
SMC6-201ENST00000351948 TTC4O95801 387 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 RPL7AP62424 266 aaKnown RBP14.18□□□□□ -0.14
SMC6-201ENST00000351948 TERF2Q15554 542 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 NT5DC3Q86UY8 548 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 FICDQ9BVA6 458 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 XPNPEP1Q9NQW7 623 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 ZFP69BQ9UJL9 534 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 PKP3Q9Y446 797 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 MAFBQ9Y5Q3 323 aaPredicted RBP14.18□□□□□ -0.14
SMC6-201ENST00000351948 DOT1LQ8TEK3 1739 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 GOLGA8QA0A0J9YX86 632 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 GOLGA8OA6NCC3 632 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 GOLGA8NF8WBI6 632 aa14.18□□□□□ -0.14
SMC6-201ENST00000351948 GPR25O00155 361 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms