RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 CYP1B1Q16678 543 aa14.03□□□□□ -0.16
UBA3-201ENST00000349511 PPP1R15BQ5SWA1 713 aa14.03□□□□□ -0.16
UBA3-201ENST00000349511 ARHGAP17Q68EM7 881 aa14.03□□□□□ -0.16
UBA3-201ENST00000349511 PAQR9Q6ZVX9 377 aa14.03□□□□□ -0.16
UBA3-201ENST00000349511 SLC13A5Q86YT5 568 aaPredicted RBP14.03□□□□□ -0.16
UBA3-201ENST00000349511 COLGALT2Q8IYK4 626 aa14.03□□□□□ -0.16
UBA3-201ENST00000349511 ANKRD52Q8NB46 1076 aa14.03□□□□□ -0.16
UBA3-201ENST00000349511 IPO4Q8TEX9 1081 aaKnown RBP14.03□□□□□ -0.16
UBA3-201ENST00000349511 TOX2Q96NM4 488 aa14.03□□□□□ -0.16
UBA3-201ENST00000349511 SLC40A1Q9NP59 571 aa14.03□□□□□ -0.16
UBA3-201ENST00000349511 SIGLEC16A6NMB1 481 aa14.03□□□□□ -0.16
UBA3-201ENST00000349511 CLTBP09497 229 aa14.03□□□□□ -0.16
UBA3-201ENST00000349511 RARAP10276 462 aa14.03□□□□□ -0.16
UBA3-201ENST00000349511 GABRB2P47870 512 aa14.03□□□□□ -0.16
UBA3-201ENST00000349511 LHX1P48742 406 aa14.03□□□□□ -0.16
UBA3-201ENST00000349511 ADCY2Q08462 1091 aa14.03□□□□□ -0.16
UBA3-201ENST00000349511 SIX1Q15475 284 aaPredicted RBP14.03□□□□□ -0.16
UBA3-201ENST00000349511 ZFYVE27Q5T4F4 411 aa14.03□□□□□ -0.16
UBA3-201ENST00000349511 C6orf118Q5T5N4 469 aa14.03□□□□□ -0.16
UBA3-201ENST00000349511 DCLRE1AQ6PJP8 1040 aa14.03□□□□□ -0.16
UBA3-201ENST00000349511 CCDC105Q8IYK2 499 aa14.03□□□□□ -0.16
UBA3-201ENST00000349511 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.03□□□□□ -0.16
UBA3-201ENST00000349511 ATXN2LQ8WWM7 1075 aaKnown RBP14.03□□□□□ -0.16
UBA3-201ENST00000349511 NDRG1Q92597 394 aaKnown RBP14.03□□□□□ -0.16
UBA3-201ENST00000349511 ACSF2Q96CM8 615 aaPredicted RBP14.03□□□□□ -0.16
UBA3-201ENST00000349511 PCED1BQ96HM7 432 aa14.03□□□□□ -0.16
UBA3-201ENST00000349511 CASD1Q96PB1 797 aa14.03□□□□□ -0.16
UBA3-201ENST00000349511 RTP3Q9BQQ7 232 aa14.03□□□□□ -0.16
UBA3-201ENST00000349511 KLC4Q9NSK0 619 aa14.03□□□□□ -0.16
UBA3-201ENST00000349511 IP6K2Q9UHH9 426 aa14.03□□□□□ -0.16
UBA3-201ENST00000349511 TBX21Q9UL17 535 aa14.03□□□□□ -0.16
UBA3-201ENST00000349511 RIPK2O43353 540 aa14.02□□□□□ -0.16
UBA3-201ENST00000349511 PSMA2P25787 234 aa14.02□□□□□ -0.16
UBA3-201ENST00000349511 KCNJ1P48048 391 aa14.02□□□□□ -0.16
UBA3-201ENST00000349511 BCAT1P54687 386 aa14.02□□□□□ -0.16
UBA3-201ENST00000349511 MAP3K7CLP57077 242 aa14.02□□□□□ -0.16
UBA3-201ENST00000349511 DSC1Q08554 894 aa14.02□□□□□ -0.16
UBA3-201ENST00000349511 BST2Q10589 180 aaKnown RBP14.02□□□□□ -0.16
UBA3-201ENST00000349511 ZNF268Q14587 947 aaPredicted RBP14.02□□□□□ -0.16
UBA3-201ENST00000349511 LACTB2Q53H82 288 aaPredicted RBP14.02□□□□□ -0.16
UBA3-201ENST00000349511 SH3PXD2AQ5TCZ1 1133 aa14.02□□□□□ -0.16
UBA3-201ENST00000349511 TXNRD3NBQ6F5E7 133 aa14.02□□□□□ -0.16
UBA3-201ENST00000349511 FAM117BQ6P1L5 589 aa14.02□□□□□ -0.16
UBA3-201ENST00000349511 EPS8L3Q8TE67 593 aaKnown RBP14.02□□□□□ -0.16
UBA3-201ENST00000349511 ART4Q93070 314 aa14.02□□□□□ -0.16
UBA3-201ENST00000349511 B3GALT6Q96L58 329 aa14.02□□□□□ -0.16
UBA3-201ENST00000349511 ZNF317Q96PQ6 595 aaPredicted RBP14.02□□□□□ -0.16
UBA3-201ENST00000349511 KCNK16Q96T55 309 aa14.02□□□□□ -0.16
UBA3-201ENST00000349511 NRDE2Q9H7Z3 1164 aa14.02□□□□□ -0.16
UBA3-201ENST00000349511 MTUS1Q9ULD2 1270 aa14.02□□□□□ -0.16
UBA3-201ENST00000349511 TANC1Q9C0D5 1861 aa14.02□□□□□ -0.17
UBA3-201ENST00000349511 TBKBP1A7MCY6 615 aa14.02□□□□□ -0.17
UBA3-201ENST00000349511 INPPL1O15357 1258 aa14.02□□□□□ -0.17
UBA3-201ENST00000349511 PAPSS1O43252 624 aaPredicted RBP14.02□□□□□ -0.17
UBA3-201ENST00000349511 AGTP01019 485 aa14.02□□□□□ -0.17
UBA3-201ENST00000349511 CXCL10P02778 98 aa14.02□□□□□ -0.17
UBA3-201ENST00000349511 CTCFP49711 727 aaPredicted RBP14.02□□□□□ -0.17
UBA3-201ENST00000349511 CACNA2D1P54289 1103 aa14.02□□□□□ -0.17
UBA3-201ENST00000349511 RWDD2BP57060 319 aa14.02□□□□□ -0.17
UBA3-201ENST00000349511 CDO1Q16878 200 aa14.02□□□□□ -0.17
UBA3-201ENST00000349511 RAB6CQ53S08 254 aa14.02□□□□□ -0.17
UBA3-201ENST00000349511 CEP57Q86XR8 500 aa14.02□□□□□ -0.17
UBA3-201ENST00000349511 TMEM86AQ8N2M4 240 aa14.02□□□□□ -0.17
UBA3-201ENST00000349511 OR10T2Q8NGX3 314 aa14.02□□□□□ -0.17
UBA3-201ENST00000349511 CCT6BQ92526 530 aa14.02□□□□□ -0.17
UBA3-201ENST00000349511 APBB2Q92870 758 aa14.02□□□□□ -0.17
UBA3-201ENST00000349511 VWCEQ96DN2 955 aa14.02□□□□□ -0.17
UBA3-201ENST00000349511 MCRS1Q96EZ8 462 aa14.02□□□□□ -0.17
UBA3-201ENST00000349511 UROC1Q96N76 676 aa14.02□□□□□ -0.17
UBA3-201ENST00000349511 RUNDC3BQ96NL0 473 aa14.02□□□□□ -0.17
UBA3-201ENST00000349511 TMEM109Q9BVC6 243 aa14.02□□□□□ -0.17
UBA3-201ENST00000349511 RAB6CQ9H0N0 254 aa14.02□□□□□ -0.17
UBA3-201ENST00000349511 TMEM30AQ9NV96 361 aa14.02□□□□□ -0.17
UBA3-201ENST00000349511 CDH23Q9H251 3354 aa14.01□□□□□ -0.17
UBA3-201ENST00000349511 TRIM43BA6NCK2 446 aa14.01□□□□□ -0.17
UBA3-201ENST00000349511 NRP1O14786 923 aa14.01□□□□□ -0.17
UBA3-201ENST00000349511 TADA2AO75478 443 aa14.01□□□□□ -0.17
UBA3-201ENST00000349511 OR4Q2P0C623 313 aa14.01□□□□□ -0.17
UBA3-201ENST00000349511 RARGP13631 454 aa14.01□□□□□ -0.17
UBA3-201ENST00000349511 CSF2RAP15509 400 aa14.01□□□□□ -0.17
UBA3-201ENST00000349511 SLC1A1P43005 524 aa14.01□□□□□ -0.17
UBA3-201ENST00000349511 SLCO1A2P46721 670 aa14.01□□□□□ -0.17
UBA3-201ENST00000349511 SCTRP47872 440 aa14.01□□□□□ -0.17
UBA3-201ENST00000349511 SLMAPQ14BN4 828 aa14.01□□□□□ -0.17
UBA3-201ENST00000349511 PKN2Q16513 984 aaKnown RBP14.01□□□□□ -0.17
UBA3-201ENST00000349511 SMTNL2Q2TAL5 461 aa14.01□□□□□ -0.17
UBA3-201ENST00000349511 OVOS1Q6IE37 1185 aa14.01□□□□□ -0.17
UBA3-201ENST00000349511 TRNP1Q6NT89 227 aa14.01□□□□□ -0.17
UBA3-201ENST00000349511 CROCCP2Q86T23 111 aa14.01□□□□□ -0.17
UBA3-201ENST00000349511 PIGZQ86VD9 579 aa14.01□□□□□ -0.17
UBA3-201ENST00000349511 LRRTM3Q86VH5 581 aa14.01□□□□□ -0.17
UBA3-201ENST00000349511 METTL23Q86XA0 190 aa14.01□□□□□ -0.17
UBA3-201ENST00000349511 CCDC197Q8NCU1 140 aa14.01□□□□□ -0.17
UBA3-201ENST00000349511 TRIM43Q96BQ3 446 aaPredicted RBP14.01□□□□□ -0.17
UBA3-201ENST00000349511 HNRNPABQ99729 332 aaKnown RBP14.01□□□□□ -0.17
UBA3-201ENST00000349511 TMEM106CQ9BVX2 250 aa14.01□□□□□ -0.17
UBA3-201ENST00000349511 SLC4A5Q9BY07 1137 aa14.01□□□□□ -0.17
UBA3-201ENST00000349511 KRT82Q9NSB4 513 aa14.01□□□□□ -0.17
UBA3-201ENST00000349511 TMLHEQ9NVH6 421 aa14.01□□□□□ -0.17
UBA3-201ENST00000349511 WDR35Q9P2L0 1181 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms