RNA–Protein interactions for RNA: ENST00000344749.9

TCF3-202, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 4,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-202ENST00000344749 SERPINB9P50453 376 aa13.54□□□□□ -0.24
TCF3-202ENST00000344749 LBX2Q6XYB7 198 aa13.54□□□□□ -0.24
TCF3-202ENST00000344749 EP400NLQ6ZTU2 488 aa13.54□□□□□ -0.24
TCF3-202ENST00000344749 NLGN2Q8NFZ4 835 aa13.54□□□□□ -0.24
TCF3-202ENST00000344749 SPDL1Q96EA4 605 aa13.54□□□□□ -0.24
TCF3-202ENST00000344749 DDX27Q96GQ7 796 aaKnown RBP13.54□□□□□ -0.24
TCF3-202ENST00000344749 OSBPL1AQ9BXW6 950 aa13.54□□□□□ -0.24
TCF3-202ENST00000344749 DDX43Q9NXZ2 648 aaKnown RBP13.54□□□□□ -0.24
TCF3-202ENST00000344749 GRID1Q9ULK0 1009 aa13.54□□□□□ -0.24
TCF3-202ENST00000344749 LIASO43766 372 aa13.54□□□□□ -0.24
TCF3-202ENST00000344749 DGKIO75912 1065 aa13.54□□□□□ -0.24
TCF3-202ENST00000344749 MYL2P10916 166 aa13.54□□□□□ -0.24
TCF3-202ENST00000344749 TPH1P17752 444 aa13.54□□□□□ -0.24
TCF3-202ENST00000344749 CHRNB2P17787 502 aa13.54□□□□□ -0.24
TCF3-202ENST00000344749 SOX11P35716 441 aa13.54□□□□□ -0.24
TCF3-202ENST00000344749 CRADDP78560 199 aa13.54□□□□□ -0.24
TCF3-202ENST00000344749 BST2Q10589 180 aaKnown RBP13.54□□□□□ -0.24
TCF3-202ENST00000344749 EXOC3L1Q86VI1 746 aa13.54□□□□□ -0.24
TCF3-202ENST00000344749 RASGEF1CQ8N431 466 aa13.54□□□□□ -0.24
TCF3-202ENST00000344749 GTF3C2Q8WUA4 911 aaPredicted RBP13.54□□□□□ -0.24
TCF3-202ENST00000344749 FAM8A1Q9UBU6 413 aa13.54□□□□□ -0.24
TCF3-202ENST00000344749 DHX15O43143 795 aaKnown RBP13.54□□□□□ -0.24
TCF3-202ENST00000344749 ARF4P18085 180 aaPredicted RBP13.54□□□□□ -0.24
TCF3-202ENST00000344749 XPAP23025 273 aaPredicted RBP13.54□□□□□ -0.24
TCF3-202ENST00000344749 AVPR1AP37288 418 aa13.54□□□□□ -0.24
TCF3-202ENST00000344749 ABCG1P45844 678 aa13.54□□□□□ -0.24
TCF3-202ENST00000344749 IL1RL1Q01638 556 aa13.54□□□□□ -0.24
TCF3-202ENST00000344749 FOXD4Q12950 439 aaPredicted RBP13.54□□□□□ -0.24
TCF3-202ENST00000344749 ACVR2BQ13705 512 aa13.54□□□□□ -0.24
TCF3-202ENST00000344749 PTPN20Q4JDL3 420 aa13.54□□□□□ -0.24
TCF3-202ENST00000344749 PRPF39Q86UA1 669 aaKnown RBP13.54□□□□□ -0.24
TCF3-202ENST00000344749 SLC26A11Q86WA9 606 aa13.54□□□□□ -0.24
TCF3-202ENST00000344749 CD302Q8IX05 232 aa13.54□□□□□ -0.24
TCF3-202ENST00000344749 COLGALT1Q8NBJ5 622 aa13.54□□□□□ -0.24
TCF3-202ENST00000344749 SERPINI1Q99574 410 aa13.54□□□□□ -0.24
TCF3-202ENST00000344749 RNPEPQ9H4A4 650 aa13.54□□□□□ -0.24
TCF3-202ENST00000344749 SUDS3Q9H7L9 328 aaPredicted RBP13.54□□□□□ -0.24
TCF3-202ENST00000344749 PPCSQ9HAB8 311 aa13.54□□□□□ -0.24
TCF3-202ENST00000344749 PHLPP1O60346 1717 aa13.54□□□□□ -0.24
TCF3-202ENST00000344749 GOLGA8TH3BQL2 631 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 SMAPO00193 183 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 AIM2O14862 343 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 THP07101 528 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 FAAP100Q0VG06 881 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 EIF1ADQ8N9N8 165 aaKnown RBP13.53□□□□□ -0.24
TCF3-202ENST00000344749 TMEM237Q96Q45 408 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 DONSONQ9NYP3 566 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 SIGLEC16A6NMB1 481 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 S100BP04271 92 aaPredicted RBP13.53□□□□□ -0.24
TCF3-202ENST00000344749 PAEPP09466 180 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 ENO3P13929 434 aaPredicted RBP13.53□□□□□ -0.24
TCF3-202ENST00000344749 RPL22P35268 128 aaKnown RBP13.53□□□□□ -0.24
TCF3-202ENST00000344749 RPL10AP62906 217 aaKnown RBP13.53□□□□□ -0.24
TCF3-202ENST00000344749 KBTBD12Q3ZCT8 623 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 ANKRD20A8PQ5CZ79 823 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 ZC3H12AQ5D1E8 599 aaKnown RBP13.53□□□□□ -0.24
TCF3-202ENST00000344749 TLK2Q86UE8 772 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 AGGF1Q8N302 714 aaeCLIP13.53□□□□□ -0.241e-6■■■□□ 16.6
TCF3-202ENST00000344749 RAET1EQ8TD07 263 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 GAD1Q99259 594 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 Q9H521 79 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 NOCTQ9UK39 431 aaKnown RBP13.53□□□□□ -0.24
TCF3-202ENST00000344749 TNFSF13BQ9Y275 285 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 ATRNL1Q5VV63 1379 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 CASQ2O14958 399 aaPredicted RBP13.53□□□□□ -0.24
TCF3-202ENST00000344749 C4BPAP04003 597 aaKnown RBP13.53□□□□□ -0.24
TCF3-202ENST00000344749 GHRP10912 638 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 NQO1P15559 274 aaKnown RBP13.53□□□□□ -0.24
TCF3-202ENST00000344749 MMP8P22894 467 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 ERMARDQ5T6L9 678 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 MTHFD1LQ6UB35 978 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 KIRREL3Q8IZU9 778 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 ZCCHC9Q8N567 271 aaKnown RBP13.53□□□□□ -0.24
TCF3-202ENST00000344749 ELMO2Q96JJ3 720 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 ZNF512Q96ME7 567 aaPredicted RBP13.53□□□□□ -0.24
TCF3-202ENST00000344749 B3GNT5Q9BYG0 378 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 APOBEC3GQ9HC16 384 aaKnown RBP13.53□□□□□ -0.24
TCF3-202ENST00000344749 ZFYVE28Q9HCC9 887 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 SLCO1B3Q9NPD5 702 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 NUP98P52948 1817 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 MROH7Q68CQ1 1323 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 ADGRA3Q8IWK6 1321 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 SDR42E2A6NKP2 422 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 APOC4-APOC2K7ER74 178 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 NFKBIEO00221 500 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 APOC2P02655 101 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 TCN1P20061 433 aaPredicted RBP13.53□□□□□ -0.24
TCF3-202ENST00000344749 DRG2P55039 364 aaKnown RBP13.53□□□□□ -0.24
TCF3-202ENST00000344749 RTP1P59025 263 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 CNGA2Q16280 664 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 QPCTQ16769 361 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 PHF13Q86YI8 300 aaPredicted RBP13.53□□□□□ -0.24
TCF3-202ENST00000344749 EFHBQ8N7U6 833 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 ART4Q93070 314 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 YIPF3Q9GZM5 350 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 NDE1Q9NXR1 346 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 SLC24A2Q9UI40 661 aa13.53□□□□□ -0.24
TCF3-202ENST00000344749 ZNF536O15090 1300 aa13.52□□□□□ -0.24
TCF3-202ENST00000344749 C2CD2LO14523 706 aa13.52□□□□□ -0.24
TCF3-202ENST00000344749 YWHAZP63104 245 aaKnown RBP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms