RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 CHST12Q9NRB3 414 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 KRT82Q9NSB4 513 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 WHRNQ9P202 907 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 CTNNAL1Q9UBT7 734 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 HEY1Q9Y5J3 304 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 MRPL42Q9Y6G3 142 aaKnown RBP7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 C5orf42Q9H799 3197 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 A0A1W2PQ45 241 aaPredicted RBP7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 A0A1W2PQY0 241 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 YJEFN3A6XGL0 299 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 GOLGA8KD6RF30 607 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 E7ENQ6 273 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 I6L893 689 aaPredicted RBP7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 DDHD2O94830 711 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 ENDOD1O94919 500 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 FYNP06241 537 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 ITIH2P19823 946 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 CST5P28325 142 aaPredicted RBP7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 PCK1P35558 622 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 MAGOHP61326 146 aaKnown RBP7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 IFFO1Q0D2I5 559 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 STILQ15468 1287 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 CAPN12Q6ZSI9 719 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 BBS12Q6ZW61 710 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 MRPL10Q7Z7H8 261 aaKnown RBP7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 DEFB106AQ8N104 65 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 TTC39CQ8N584 583 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 PCSK9Q8NBP7 692 aaKnown RBP7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 PCDH19Q8TAB3 1148 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 MDM1Q8TC05 714 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 SPATA18Q8TC71 538 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 TNIP3Q96KP6 325 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 GLT1D1Q96MS3 346 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 HNRNPABQ99729 332 aaKnown RBP7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 ANLNQ9NQW6 1124 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 ETNK2Q9NVF9 386 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 NAALADL1Q9UQQ1 740 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 GIT1Q9Y2X7 761 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 CHD7Q9P2D1 2997 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 ZNF623O75123 536 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 OR4Q2P0C623 313 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 USP17L7P0C7H9 530 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 RARGP13631 454 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 CREB1P16220 341 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 NPR3P17342 541 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 CETN2P41208 172 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 PGFP49763 221 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 GATMP50440 423 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 COPS2P61201 443 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 SLC10A2Q12908 348 aaPredicted RBP7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 GPNMBQ14956 572 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 OTUD1Q5VV17 481 aaPredicted RBP7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 TP53INP2Q8IXH6 220 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 PLD5Q8N7P1 536 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 OR10T2Q8NGX3 314 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 GRK7Q8WTQ7 553 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 SYT15Q9BQS2 421 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 C11orf84Q9BUA3 381 aaPredicted RBP7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 TRAIPQ9BWF2 469 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 MTMR10Q9NXD2 777 aa7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 MTRF1LQ9UGC7 380 aaKnown RBP7.73□□□□□ -1.17
SRFBP1-201ENST00000339397 THSD7BQ9C0I4 1608 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 AP1G2O75843 785 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 RBP3P10745 1247 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 BDNFP23560 247 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 RPL34P49207 117 aaKnown RBP7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 TKTL1P51854 596 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 BCAR1P56945 870 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 EIF3EP60228 445 aaKnown RBP7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 PTK7Q13308 1070 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 MTFR1Q15390 333 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 TCTN1Q2MV58 587 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 MSS51Q4VC12 460 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 ANKRD20A8PQ5CZ79 823 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 CLLU1OSQ5K130 101 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 DENND2CQ68D51 928 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 HIBCHQ6NVY1 386 aaPredicted RBP7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 LRRC31Q6UY01 552 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 SLC26A9Q7LBE3 791 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 ECHDC2Q86YB7 292 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 CCDC89Q8N998 374 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 STK32AQ8WU08 396 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 NKD2Q969F2 451 aaPredicted RBP7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 B3GALT6Q96L58 329 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 RNF157Q96PX1 679 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 DHX35Q9H5Z1 703 aaKnown RBP7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 PCDH18Q9HCL0 1135 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 HOMER3Q9NSC5 361 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 DNAJB4Q9UDY4 337 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 FEZ2Q9UHY8 353 aaPredicted RBP7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 PTCH2Q9Y6C5 1203 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 XPO1O14980 1071 aaKnown RBP7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 ITGAVP06756 1048 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 NR1D1P20393 614 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 L1CAMP32004 1257 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 PTPN7P35236 360 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 RPL22P35268 128 aaKnown RBP7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 PBX3P40426 434 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 IRAK1P51617 712 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 GBE1Q04446 702 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms